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Moc01g00510 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g00510
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr1:265718..266284
RNA-Seq ExpressionMoc01g00510
SyntenyMoc01g00510
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF1856945.1 hypothetical protein Lal_00002353 [Lupinus albus]1.1e-1554.72Show/hide
Query:  YKQGFSLPLLRCLDPKEAIYALERTKARSSLAIHSEGGWGSTSFMTHGLSPLLVYKEGCHLREVIQNPLA-----------PEPVEVPHADPKREALRSA
        Y  G+  P     +PKE     ERTKARSSLAIHSEGGWGSTSFMTHG        +G H      +P +            EPVEVPHADP+REALRSA
Subjt:  YKQGFSLPLLRCLDPKEAIYALERTKARSSLAIHSEGGWGSTSFMTHGLSPLLVYKEGCHLREVIQNPLA-----------PEPVEVPHADPKREALRSA

Query:  IHTLIL
        IHTLIL
Subjt:  IHTLIL

KAF5807319.1 putative nucleotidyltransferase, Ribonuclease H [Helianthus annuus]1.5e-0747.62Show/hide
Query:  PTWMYPIKVFLQGEGLPK-QVNFKKVRCKVAGYVLQGNMLYKQGFSLPLLRCLDPKEAIYALE
        P WM PIK FLQ   LP  Q+  ++V+ K   YVLQG +LYK+G+  PLLRC+ P+++ Y ++
Subjt:  PTWMYPIKVFLQGEGLPK-QVNFKKVRCKVAGYVLQGNMLYKQGFSLPLLRCLDPKEAIYALE

XP_022151715.1 uncharacterized protein LOC111019628 [Momordica charantia]1.5e-0744.12Show/hide
Query:  MSIEVTTPTWMYPIKVFLQGEGLPKQVNFKKVRCKVAGYVLQGNMLYKQGFSLPLLRCLDPKEAIYAL
        M I++ +P+WM PI  F+QG    +    KK+  K A +VL+   LY++GFSLPLL+C+ P+E +Y L
Subjt:  MSIEVTTPTWMYPIKVFLQGEGLPKQVNFKKVRCKVAGYVLQGNMLYKQGFSLPLLRCLDPKEAIYAL

XP_022156986.1 uncharacterized protein LOC111023816 [Momordica charantia]1.5e-0747.83Show/hide
Query:  MSIEVTTPTWMYPIKVFLQGEGLPKQVN-FKKVRCKVAGYVLQGNMLYKQGFSLPLLRCLDPKEAIYAL
        M I    PTWM PIK FL    +P   +  +K+R + A Y++Q   L+K+G+SLPLLRCLDP+EA Y +
Subjt:  MSIEVTTPTWMYPIKVFLQGEGLPKQVN-FKKVRCKVAGYVLQGNMLYKQGFSLPLLRCLDPKEAIYAL

XP_022158215.1 uncharacterized protein LOC111024751 [Momordica charantia]1.1e-0747.83Show/hide
Query:  MSIEVTTPTWMYPIKVFLQGEGLPKQVN-FKKVRCKVAGYVLQGNMLYKQGFSLPLLRCLDPKEAIYAL
        M I    PTWM PIK FL    +P   +  +K+R + A Y++Q   L+K+G+SLPLLRCLDP+EA Y +
Subjt:  MSIEVTTPTWMYPIKVFLQGEGLPKQVN-FKKVRCKVAGYVLQGNMLYKQGFSLPLLRCLDPKEAIYAL

TrEMBL top hitse value%identityAlignment
A0A251VBH2 Putative ribonuclease H-like domain-containing protein1.9e-0834.21Show/hide
Query:  PTWMYPIKVFLQGEGLPK-QVNFKKVRCKVAGYVLQGNMLYKQGFSLPLLRCLDPKEAIYALERTKARSSLAIHSEGGWGSTSFMTHGLSPLLVYKEGCH
        P WM PIK FLQ   LP  Q+  ++V+ K   YVLQG +LYK+G+  PLLRC+ P+++ Y +   K                   TH L  LL +    +
Subjt:  PTWMYPIKVFLQGEGLPK-QVNFKKVRCKVAGYVLQGNMLYKQGFSLPLLRCLDPKEAIYALERTKARSSLAIHSEGGWGSTSFMTHGLSPLLVYKEGCH

Query:  LREVIQNPLAPEPV
         R + +    P P+
Subjt:  LREVIQNPLAPEPV

A0A6A5LBY9 Uncharacterized protein5.5e-1654.72Show/hide
Query:  YKQGFSLPLLRCLDPKEAIYALERTKARSSLAIHSEGGWGSTSFMTHGLSPLLVYKEGCHLREVIQNPLA-----------PEPVEVPHADPKREALRSA
        Y  G+  P     +PKE     ERTKARSSLAIHSEGGWGSTSFMTHG        +G H      +P +            EPVEVPHADP+REALRSA
Subjt:  YKQGFSLPLLRCLDPKEAIYALERTKARSSLAIHSEGGWGSTSFMTHGLSPLLVYKEGCHLREVIQNPLA-----------PEPVEVPHADPKREALRSA

Query:  IHTLIL
        IHTLIL
Subjt:  IHTLIL

A0A6J1DBZ0 uncharacterized protein LOC1110196287.1e-0844.12Show/hide
Query:  MSIEVTTPTWMYPIKVFLQGEGLPKQVNFKKVRCKVAGYVLQGNMLYKQGFSLPLLRCLDPKEAIYAL
        M I++ +P+WM PI  F+QG    +    KK+  K A +VL+   LY++GFSLPLL+C+ P+E +Y L
Subjt:  MSIEVTTPTWMYPIKVFLQGEGLPKQVNFKKVRCKVAGYVLQGNMLYKQGFSLPLLRCLDPKEAIYAL

A0A6J1DV78 Ribonuclease H5.5e-0847.83Show/hide
Query:  MSIEVTTPTWMYPIKVFLQGEGLPKQVN-FKKVRCKVAGYVLQGNMLYKQGFSLPLLRCLDPKEAIYAL
        M I    PTWM PIK FL    +P   +  +K+R + A Y++Q   L+K+G+SLPLLRCLDP+EA Y +
Subjt:  MSIEVTTPTWMYPIKVFLQGEGLPKQVN-FKKVRCKVAGYVLQGNMLYKQGFSLPLLRCLDPKEAIYAL

A0A6J1DWM2 Ribonuclease H7.1e-0847.83Show/hide
Query:  MSIEVTTPTWMYPIKVFLQGEGLPKQVN-FKKVRCKVAGYVLQGNMLYKQGFSLPLLRCLDPKEAIYAL
        M I    PTWM PIK FL    +P   +  +K+R + A Y++Q   L+K+G+SLPLLRCLDP+EA Y +
Subjt:  MSIEVTTPTWMYPIKVFLQGEGLPKQVN-FKKVRCKVAGYVLQGNMLYKQGFSLPLLRCLDPKEAIYAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTATAGAGGTAACGACACCGACCTGGATGTATCCCATAAAAGTCTTCCTTCAAGGTGAAGGCTTACCAAAGCAGGTCAACTTCAAAAAAGTACGATGCAAGGTAGC
AGGGTACGTCCTCCAGGGCAACATGCTGTACAAGCAGGGATTCTCCCTTCCATTGTTGAGATGCTTGGATCCAAAAGAGGCGATTTATGCCCTAGAACGGACTAAAGCGA
GGAGTTCATTGGCCATACATAGTGAAGGGGGATGGGGGTCAACCTCTTTCATGACCCATGGCCTTTCTCCTTTATTAGTGTATAAGGAAGGGTGTCACTTGAGGGAGGTC
ATTCAGAACCCGCTGGCTCCAGAACCGGTGGAAGTTCCCCACGCCGACCCCAAACGTGAGGCACTTCGAAGTGCCATTCACACTTTGATTCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTATAGAGGTAACGACACCGACCTGGATGTATCCCATAAAAGTCTTCCTTCAAGGTGAAGGCTTACCAAAGCAGGTCAACTTCAAAAAAGTACGATGCAAGGTAGC
AGGGTACGTCCTCCAGGGCAACATGCTGTACAAGCAGGGATTCTCCCTTCCATTGTTGAGATGCTTGGATCCAAAAGAGGCGATTTATGCCCTAGAACGGACTAAAGCGA
GGAGTTCATTGGCCATACATAGTGAAGGGGGATGGGGGTCAACCTCTTTCATGACCCATGGCCTTTCTCCTTTATTAGTGTATAAGGAAGGGTGTCACTTGAGGGAGGTC
ATTCAGAACCCGCTGGCTCCAGAACCGGTGGAAGTTCCCCACGCCGACCCCAAACGTGAGGCACTTCGAAGTGCCATTCACACTTTGATTCTTTAG
Protein sequenceShow/hide protein sequence
MSIEVTTPTWMYPIKVFLQGEGLPKQVNFKKVRCKVAGYVLQGNMLYKQGFSLPLLRCLDPKEAIYALERTKARSSLAIHSEGGWGSTSFMTHGLSPLLVYKEGCHLREV
IQNPLAPEPVEVPHADPKREALRSAIHTLIL