; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc01g00690 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g00690
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr1:462640..462966
RNA-Seq ExpressionMoc01g00690
SyntenyMoc01g00690
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFS28488.1 hypothetical protein Acr_00g0002060 [Actinidia rufa]9.5e-1548Show/hide
Query:  SLSSTTSWLVDYGCNSHVTADLGNFSSAASYVGDDQVAVGSGQSLPISHLGCGTLQTPTASFSLLNLLHVAHISSNLLSVHSLCSDNNYIMVFDSNAFFV
        +++ T SWL+D G  +H+T DL N      Y G DQV VG+G +LPI + G G L TP+ SF L N+LHV  I SNLLSV     DN+ I+ FDS +F +
Subjt:  SLSSTTSWLVDYGCNSHVTADLGNFSSAASYVGDDQVAVGSGQSLPISHLGCGTLQTPTASFSLLNLLHVAHISSNLLSVHSLCSDNNYIMVFDSNAFFV

GFS28490.1 hypothetical protein Acr_00g0002080 [Actinidia rufa]9.5e-1548Show/hide
Query:  SLSSTTSWLVDYGCNSHVTADLGNFSSAASYVGDDQVAVGSGQSLPISHLGCGTLQTPTASFSLLNLLHVAHISSNLLSVHSLCSDNNYIMVFDSNAFFV
        +++ T SWL+D G  +H+T DL N      Y G DQV VG+G +LPI + G G L TP+ SF L N+LHV  I SNLLSV     DN+ I+ FDS +F +
Subjt:  SLSSTTSWLVDYGCNSHVTADLGNFSSAASYVGDDQVAVGSGQSLPISHLGCGTLQTPTASFSLLNLLHVAHISSNLLSVHSLCSDNNYIMVFDSNAFFV

XP_022156563.1 uncharacterized protein LOC111023438 [Momordica charantia]1.7e-2459.63Show/hide
Query:  MVVAQNQASL-SSTTSWLVDYGCNSHVTADLGNFSSAASYVGDDQVAVGSGQSLPISHLGCGTLQTPTASFSLLNLLHVAHISSNLLSVHSLCSDNNYIM
        MV   N A+L SS  SWL D GCN+HVTADL   S+A+ Y GD+Q+ VG+GQSLPI+H   G L T T+S  L NLLHV  ISSNLLSVH LC DNN  +
Subjt:  MVVAQNQASL-SSTTSWLVDYGCNSHVTADLGNFSSAASYVGDDQVAVGSGQSLPISHLGCGTLQTPTASFSLLNLLHVAHISSNLLSVHSLCSDNNYIM

Query:  VFDSNAFFV
        VFD N F++
Subjt:  VFDSNAFFV

XP_022158189.1 uncharacterized protein LOC111024722 [Momordica charantia]1.5e-1546.79Show/hide
Query:  VVAQNQASLSSTTS--WLVDYGCNSHVTADLGNFSSAASYVGDDQVAVGSGQSLPISHLGCGTLQTPTASFSLLNLLHVAHISSNLLSVHSLCSDNNYIM
        V A   +S S+T +  WL D GCN+HVT DL N +   SY G++ V VG+GQSL ISH G G L   + +F++ N+LH   +++NLLSVH  C DN+ I 
Subjt:  VVAQNQASLSSTTS--WLVDYGCNSHVTADLGNFSSAASYVGDDQVAVGSGQSLPISHLGCGTLQTPTASFSLLNLLHVAHISSNLLSVHSLCSDNNYIM

Query:  VFDSNAFFV
        V+DS+ F +
Subjt:  VFDSNAFFV

XP_028071086.1 uncharacterized protein LOC114273489 isoform X1 [Camellia sinensis]1.9e-1551.06Show/hide
Query:  SWLVDYGCNSHVTADLGNFSSAASYVGDDQVAVGSGQSLPISHLGCGTLQTPTASFSLLNLLHVAHISSNLLSVHSLCSDNNYIMVFDSNAFFV
        +W VD     HVT DL   S    Y G DQV +G G +LPI H+G G L TP+    L  +LHV HISSNLLSVH   SDNN  + FD+N F V
Subjt:  SWLVDYGCNSHVTADLGNFSSAASYVGDDQVAVGSGQSLPISHLGCGTLQTPTASFSLLNLLHVAHISSNLLSVHSLCSDNNYIMVFDSNAFFV

TrEMBL top hitse value%identityAlignment
A0A2N9F5X0 Uncharacterized protein5.8e-1854.26Show/hide
Query:  SWLVDYGCNSHVTADLGNFSSAASYVGDDQVAVGSGQSLPISHLGCGTLQTPTASFSLLNLLHVAHISSNLLSVHSLCSDNNYIMVFDSNAFFV
        +WL D G   H+TA+L N  +AA Y G +QV+VG+GQS+PI+H+G G L T   +F L NLLH + ISSNLLSV +LC DNN    FDSN F +
Subjt:  SWLVDYGCNSHVTADLGNFSSAASYVGDDQVAVGSGQSLPISHLGCGTLQTPTASFSLLNLLHVAHISSNLLSVHSLCSDNNYIMVFDSNAFFV

A0A2N9HZ49 Uncharacterized protein1.2e-1849.07Show/hide
Query:  MVVAQNQASLSSTTSWLVDYGCNSHVTADLGNFSSAASYVGDDQVAVGSGQSLPISHLGCGTLQTPTASFSLLNLLHVAHISSNLLSVHSLCSDNNYIMV
        M    N +   +  +WL D G   H+T++LGN +    Y G DQVAVG+GQS+PI+++G G L T   +F L NLLH   ISSNLLSVH LC  NNY   
Subjt:  MVVAQNQASLSSTTSWLVDYGCNSHVTADLGNFSSAASYVGDDQVAVGSGQSLPISHLGCGTLQTPTASFSLLNLLHVAHISSNLLSVHSLCSDNNYIMV

Query:  FDSNAFFV
        FDSN F +
Subjt:  FDSNAFFV

A0A2N9I1S1 Uncharacterized protein1.3e-1755.32Show/hide
Query:  SWLVDYGCNSHVTADLGNFSSAASYVGDDQVAVGSGQSLPISHLGCGTLQTPTASFSLLNLLHVAHISSNLLSVHSLCSDNNYIMVFDSNAFFV
        +WL D G   H+TA+L N +    Y G DQVAVG+GQS+PI+H G G L T   +F L NLLH + ISSNLLSVH LC+DNN    FDSN F +
Subjt:  SWLVDYGCNSHVTADLGNFSSAASYVGDDQVAVGSGQSLPISHLGCGTLQTPTASFSLLNLLHVAHISSNLLSVHSLCSDNNYIMVFDSNAFFV

A0A2N9I8F3 Uncharacterized protein4.0e-1955.32Show/hide
Query:  SWLVDYGCNSHVTADLGNFSSAASYVGDDQVAVGSGQSLPISHLGCGTLQTPTASFSLLNLLHVAHISSNLLSVHSLCSDNNYIMVFDSNAFFV
        +WL D G   H+TA+L N  +AA Y G +QV+VG+GQS+PI+H+G G L T   +F L NLLH + ISSNLLSVH+LC DNN    FDSN F +
Subjt:  SWLVDYGCNSHVTADLGNFSSAASYVGDDQVAVGSGQSLPISHLGCGTLQTPTASFSLLNLLHVAHISSNLLSVHSLCSDNNYIMVFDSNAFFV

A0A6J1DQZ0 uncharacterized protein LOC1110234388.4e-2559.63Show/hide
Query:  MVVAQNQASL-SSTTSWLVDYGCNSHVTADLGNFSSAASYVGDDQVAVGSGQSLPISHLGCGTLQTPTASFSLLNLLHVAHISSNLLSVHSLCSDNNYIM
        MV   N A+L SS  SWL D GCN+HVTADL   S+A+ Y GD+Q+ VG+GQSLPI+H   G L T T+S  L NLLHV  ISSNLLSVH LC DNN  +
Subjt:  MVVAQNQASL-SSTTSWLVDYGCNSHVTADLGNFSSAASYVGDDQVAVGSGQSLPISHLGCGTLQTPTASFSLLNLLHVAHISSNLLSVHSLCSDNNYIM

Query:  VFDSNAFFV
        VFD N F++
Subjt:  VFDSNAFFV

SwissProt top hitse value%identityAlignment
Q94HW2 Retrovirus-related Pol polyprotein from transposon RE16.0e-1239.18Show/hide
Query:  STTSWLVDYGCNSHVTADLGNFSSAASYVGDDQVAVGSGQSLPISHLGCGTLQTPTASFSLLNLLHVAHISSNLLSVHSLCSDNNYIMVFDSNAFFV
        S+ +WL+D G   H+T+D  N S    Y G D V V  G ++PISH G  +L T +   +L N+L+V +I  NL+SV+ LC+ N   + F   +F V
Subjt:  STTSWLVDYGCNSHVTADLGNFSSAASYVGDDQVAVGSGQSLPISHLGCGTLQTPTASFSLLNLLHVAHISSNLLSVHSLCSDNNYIMVFDSNAFFV

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE26.6e-1136.08Show/hide
Query:  STTSWLVDYGCNSHVTADLGNFSSAASYVGDDQVAVGSGQSLPISHLGCGTLQTPTASFSLLNLLHVAHISSNLLSVHSLCSDNNYIMVFDSNAFFV
        +  +WL+D G   H+T+D  N S    Y G D V +  G ++PI+H G  +L T + S  L  +L+V +I  NL+SV+ LC+ N   + F   +F V
Subjt:  STTSWLVDYGCNSHVTADLGNFSSAASYVGDDQVAVGSGQSLPISHLGCGTLQTPTASFSLLNLLHVAHISSNLLSVHSLCSDNNYIMVFDSNAFFV

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGTTGCTCAAAATCAGGCTTCTCTCTCTTCCACCACGTCATGGTTGGTTGATTATGGTTGCAATTCTCATGTCACAGCAGACTTGGGTAACTTTTCTTCTGCTGC
GAGCTATGTTGGTGATGATCAAGTGGCTGTAGGAAGTGGTCAATCGTTACCGATTTCTCATTTAGGTTGTGGTACCCTCCAAACTCCTACTGCTTCCTTTTCTCTCCTTA
ATTTGTTACATGTTGCTCATATTTCCTCTAATCTACTTTCTGTCCATAGTTTATGTTCTGATAACAACTATATTATGGTCTTCGACTCTAATGCCTTCTTTGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGTTGCTCAAAATCAGGCTTCTCTCTCTTCCACCACGTCATGGTTGGTTGATTATGGTTGCAATTCTCATGTCACAGCAGACTTGGGTAACTTTTCTTCTGCTGC
GAGCTATGTTGGTGATGATCAAGTGGCTGTAGGAAGTGGTCAATCGTTACCGATTTCTCATTTAGGTTGTGGTACCCTCCAAACTCCTACTGCTTCCTTTTCTCTCCTTA
ATTTGTTACATGTTGCTCATATTTCCTCTAATCTACTTTCTGTCCATAGTTTATGTTCTGATAACAACTATATTATGGTCTTCGACTCTAATGCCTTCTTTGTTTAG
Protein sequenceShow/hide protein sequence
MVVAQNQASLSSTTSWLVDYGCNSHVTADLGNFSSAASYVGDDQVAVGSGQSLPISHLGCGTLQTPTASFSLLNLLHVAHISSNLLSVHSLCSDNNYIMVFDSNAFFV