; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc01g00730 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g00730
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr1:471990..472958
RNA-Seq ExpressionMoc01g00730
SyntenyMoc01g00730
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]7.4e-7177.37Show/hide
Query:  MRTQMRSMEEMYNEMILAASAGSRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNP
        MRTQM +ME+MY+EM+ AA A SRSENR+ R D+ EQRG HLGPV++ HPE  E E +T QRGDLREHLNRKR SSLRKGQSPS SHR+SNQQAESS+NP
Subjt:  MRTQMRSMEEMYNEMILAASAGSRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNP

Query:  ATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEVFEGPMDFQAA
         TP GVITR EFDQL+ K DAQVEALKAKCE+KE S +DGDLGESPFTSD+LEA IP KFK PT+KPYDGSKDPKDYVEVFEG MDFQAA
Subjt:  ATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEVFEGPMDFQAA

XP_022152033.1 uncharacterized protein LOC111019842 [Momordica charantia]3.7e-5487.88Show/hide
Query:  KRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGS
        +RGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITR EFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIP KFKAPTVKPYDGS
Subjt:  KRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGS

Query:  KDPKDYVEVFEGPMDFQAAQTQSNVTPFRSRL
        +DPKDYVEVFEG MDFQAA        F+  L
Subjt:  KDPKDYVEVFEGPMDFQAAQTQSNVTPFRSRL

XP_022156088.1 uncharacterized protein LOC111023060 [Momordica charantia]4.3e-5563.73Show/hide
Query:  MEAMRTQMRSMEEMYNEMILAASAGSRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESS
        MEAMRTQMR+MEEMYN+M+  A A SRS +++   D+ EQ   H  PV+EEH             GDLR+HLNRKR SS R  ++ +  H++SNQQAESS
Subjt:  MEAMRTQMRSMEEMYNEMILAASAGSRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESS

Query:  HNPATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEVFEGPMDFQAA
        +NP  P GVITR EF+QL+ K DAQVEALK +CE+KE + +DGDLGESPFTSD+LEA IPPKFK PT+K YDGSKDPKDYVEVFEG MDFQAA
Subjt:  HNPATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEVFEGPMDFQAA

XP_022158652.1 uncharacterized protein LOC111025109 [Momordica charantia]9.4e-5082.09Show/hide
Query:  NRKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYD
        + KRGSSLRKGQSPSRSHRSSNQQAESSHN   PAG+ITR EFDQLRG+LDAQVEALKAKCEQK+ SLNDGDLGE PFTSDVLEAPIPPKFKAPTVKPYD
Subjt:  NRKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYD

Query:  GSKDPKDYVEVFEGPMDFQAAQTQSNVTPFRSRL
        G+KDPKDYVEVFEG MDFQAA        F+  L
Subjt:  GSKDPKDYVEVFEGPMDFQAAQTQSNVTPFRSRL

XP_022159327.1 uncharacterized protein LOC111025738 [Momordica charantia]1.1e-9062.83Show/hide
Query:  MVQPANSTNTADRRTLAASDAHQREVGAVVVEGQGHDGLATEPLRRSARITAPVLPPAHPRTSKATRGRGGTSKKGARGPAPAPPSENFDALQREMEAMR
        MVQP +STNT DRR L A+D HQREVGA VVEGQ H+GL TEP  RSARIT P L PAHP+  KA RGRGG S++   G APAP  ENFDALQ+EMEAMR
Subjt:  MVQPANSTNTADRRTLAASDAHQREVGAVVVEGQGHDGLATEPLRRSARITAPVLPPAHPRTSKATRGRGGTSKKGARGPAPAPPSENFDALQREMEAMR

Query:  TQMRSMEEMYNEMILAASAGSRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPAT
        TQM +MEEMYNEM+ A  AGSRSE+R  R                             +RGDLR+HL+RKR SSLRKG+SPS SH++SNQQAESS+NP  
Subjt:  TQMRSMEEMYNEMILAASAGSRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPAT

Query:  PAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEVFEGPMDFQAAQTQSNVTPFRSR
        P GVITR EFDQL+ K DAQVE LKA+CE K  + +DGDLGESPFTSD+LEA IP KFK PT+KPYDGSKDPKDYVEVFEG M FQAA        F+  
Subjt:  PAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEVFEGPMDFQAAQTQSNVTPFRSR

Query:  LLAA
        L ++
Subjt:  LLAA

TrEMBL top hitse value%identityAlignment
A0A6J1DDS5 uncharacterized protein LOC1110198421.8e-5487.88Show/hide
Query:  KRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGS
        +RGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITR EFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIP KFKAPTVKPYDGS
Subjt:  KRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGS

Query:  KDPKDYVEVFEGPMDFQAAQTQSNVTPFRSRL
        +DPKDYVEVFEG MDFQAA        F+  L
Subjt:  KDPKDYVEVFEGPMDFQAAQTQSNVTPFRSRL

A0A6J1DDW5 uncharacterized protein LOC1110196343.6e-7177.37Show/hide
Query:  MRTQMRSMEEMYNEMILAASAGSRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNP
        MRTQM +ME+MY+EM+ AA A SRSENR+ R D+ EQRG HLGPV++ HPE  E E +T QRGDLREHLNRKR SSLRKGQSPS SHR+SNQQAESS+NP
Subjt:  MRTQMRSMEEMYNEMILAASAGSRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNP

Query:  ATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEVFEGPMDFQAA
         TP GVITR EFDQL+ K DAQVEALKAKCE+KE S +DGDLGESPFTSD+LEA IP KFK PT+KPYDGSKDPKDYVEVFEG MDFQAA
Subjt:  ATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEVFEGPMDFQAA

A0A6J1DPN4 uncharacterized protein LOC1110230602.1e-5563.73Show/hide
Query:  MEAMRTQMRSMEEMYNEMILAASAGSRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESS
        MEAMRTQMR+MEEMYN+M+  A A SRS +++   D+ EQ   H  PV+EEH             GDLR+HLNRKR SS R  ++ +  H++SNQQAESS
Subjt:  MEAMRTQMRSMEEMYNEMILAASAGSRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESS

Query:  HNPATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEVFEGPMDFQAA
        +NP  P GVITR EF+QL+ K DAQVEALK +CE+KE + +DGDLGESPFTSD+LEA IPPKFK PT+K YDGSKDPKDYVEVFEG MDFQAA
Subjt:  HNPATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEVFEGPMDFQAA

A0A6J1DXR9 uncharacterized protein LOC1110251094.5e-5082.09Show/hide
Query:  NRKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYD
        + KRGSSLRKGQSPSRSHRSSNQQAESSHN   PAG+ITR EFDQLRG+LDAQVEALKAKCEQK+ SLNDGDLGE PFTSDVLEAPIPPKFKAPTVKPYD
Subjt:  NRKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYD

Query:  GSKDPKDYVEVFEGPMDFQAAQTQSNVTPFRSRL
        G+KDPKDYVEVFEG MDFQAA        F+  L
Subjt:  GSKDPKDYVEVFEGPMDFQAAQTQSNVTPFRSRL

A0A6J1DZJ1 uncharacterized protein LOC1110257385.3e-9162.83Show/hide
Query:  MVQPANSTNTADRRTLAASDAHQREVGAVVVEGQGHDGLATEPLRRSARITAPVLPPAHPRTSKATRGRGGTSKKGARGPAPAPPSENFDALQREMEAMR
        MVQP +STNT DRR L A+D HQREVGA VVEGQ H+GL TEP  RSARIT P L PAHP+  KA RGRGG S++   G APAP  ENFDALQ+EMEAMR
Subjt:  MVQPANSTNTADRRTLAASDAHQREVGAVVVEGQGHDGLATEPLRRSARITAPVLPPAHPRTSKATRGRGGTSKKGARGPAPAPPSENFDALQREMEAMR

Query:  TQMRSMEEMYNEMILAASAGSRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPAT
        TQM +MEEMYNEM+ A  AGSRSE+R  R                             +RGDLR+HL+RKR SSLRKG+SPS SH++SNQQAESS+NP  
Subjt:  TQMRSMEEMYNEMILAASAGSRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPAT

Query:  PAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEVFEGPMDFQAAQTQSNVTPFRSR
        P GVITR EFDQL+ K DAQVE LKA+CE K  + +DGDLGESPFTSD+LEA IP KFK PT+KPYDGSKDPKDYVEVFEG M FQAA        F+  
Subjt:  PAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEVFEGPMDFQAAQTQSNVTPFRSR

Query:  LLAA
        L ++
Subjt:  LLAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAACCAGCAAACTCGACCAATACGGCAGATCGAAGGACTCTAGCTGCCAGCGATGCCCACCAGAGGGAGGTCGGAGCAGTAGTGGTAGAGGGGCAAGGTCACGA
CGGCCTAGCAACAGAACCCCTCCGCAGGTCGGCACGAATCACCGCGCCTGTCCTACCACCTGCGCACCCAAGGACATCCAAGGCCACCCGTGGCCGAGGTGGGACCTCTA
AGAAGGGCGCCCGGGGTCCAGCCCCGGCTCCACCAAGTGAGAACTTTGACGCACTCCAGAGAGAAATGGAGGCAATGCGCACACAAATGCGGTCCATGGAGGAAATGTAT
AACGAGATGATACTAGCTGCAAGCGCAGGGTCCCGATCTGAAAATCGAATGACGCGCATTGACATACGCGAGCAAAGGGGTTCCCACCTCGGCCCAGTCGAGGAGGAACA
TCCCGAAGACAACGAGAGCGAGGGACACACTCGCCAGAGAGGAGACCTTCGTGAACACCTCAACAGAAAGAGAGGCTCATCTCTCCGAAAAGGACAGTCACCATCCCGCT
CACACAGGAGCTCCAACCAGCAGGCTGAATCCTCTCACAACCCAGCAACTCCCGCAGGGGTGATCACAAGGGCGGAGTTCGACCAGCTGAGGGGCAAGCTCGACGCTCAG
GTGGAGGCCTTAAAGGCCAAATGTGAGCAGAAAGAAGGTTCACTGAACGATGGCGACTTGGGAGAATCGCCCTTCACCTCGGACGTTTTGGAAGCACCGATCCCTCCGAA
GTTCAAAGCTCCTACCGTGAAGCCTTATGATGGGTCGAAGGACCCCAAGGATTATGTCGAGGTCTTTGAAGGCCCCATGGACTTCCAAGCGGCACAAACGCAATCAAATG
TCACGCCTTTCAGATCACGCTTACTGGCAGCGCGTGATTGTGGTATCGGAGACTGCCAGCCAGGTCGATCTCGACCTACTCTCAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCAACCAGCAAACTCGACCAATACGGCAGATCGAAGGACTCTAGCTGCCAGCGATGCCCACCAGAGGGAGGTCGGAGCAGTAGTGGTAGAGGGGCAAGGTCACGA
CGGCCTAGCAACAGAACCCCTCCGCAGGTCGGCACGAATCACCGCGCCTGTCCTACCACCTGCGCACCCAAGGACATCCAAGGCCACCCGTGGCCGAGGTGGGACCTCTA
AGAAGGGCGCCCGGGGTCCAGCCCCGGCTCCACCAAGTGAGAACTTTGACGCACTCCAGAGAGAAATGGAGGCAATGCGCACACAAATGCGGTCCATGGAGGAAATGTAT
AACGAGATGATACTAGCTGCAAGCGCAGGGTCCCGATCTGAAAATCGAATGACGCGCATTGACATACGCGAGCAAAGGGGTTCCCACCTCGGCCCAGTCGAGGAGGAACA
TCCCGAAGACAACGAGAGCGAGGGACACACTCGCCAGAGAGGAGACCTTCGTGAACACCTCAACAGAAAGAGAGGCTCATCTCTCCGAAAAGGACAGTCACCATCCCGCT
CACACAGGAGCTCCAACCAGCAGGCTGAATCCTCTCACAACCCAGCAACTCCCGCAGGGGTGATCACAAGGGCGGAGTTCGACCAGCTGAGGGGCAAGCTCGACGCTCAG
GTGGAGGCCTTAAAGGCCAAATGTGAGCAGAAAGAAGGTTCACTGAACGATGGCGACTTGGGAGAATCGCCCTTCACCTCGGACGTTTTGGAAGCACCGATCCCTCCGAA
GTTCAAAGCTCCTACCGTGAAGCCTTATGATGGGTCGAAGGACCCCAAGGATTATGTCGAGGTCTTTGAAGGCCCCATGGACTTCCAAGCGGCACAAACGCAATCAAATG
TCACGCCTTTCAGATCACGCTTACTGGCAGCGCGTGATTGTGGTATCGGAGACTGCCAGCCAGGTCGATCTCGACCTACTCTCAGCTGA
Protein sequenceShow/hide protein sequence
MVQPANSTNTADRRTLAASDAHQREVGAVVVEGQGHDGLATEPLRRSARITAPVLPPAHPRTSKATRGRGGTSKKGARGPAPAPPSENFDALQREMEAMRTQMRSMEEMY
NEMILAASAGSRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAEFDQLRGKLDAQ
VEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEVFEGPMDFQAAQTQSNVTPFRSRLLAARDCGIGDCQPGRSRPTLS