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Moc01g01040 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g01040
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr1:722134..728926
RNA-Seq ExpressionMoc01g01040
SyntenyMoc01g01040
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022865685.1 uncharacterized protein LOC111385521 [Olea europaea var. sylvestris]2.3e-1345.22Show/hide
Query:  EVVERDPLSFGCGIGSFMYPSSLPRR--------HMPTSFRFGLSPNHIV---LGELSDNLSYEKKPMQILDRKEQVLRNKTISLVKVLWRNHAVEEATW
        E+VER        IG   Y   LP          H+    ++ L P+H++   L EL +NL+Y  K +QILDRKE VLRNKTI LVKVLWRNHA+EEATW
Subjt:  EVVERDPLSFGCGIGSFMYPSSLPRR--------HMPTSFRFGLSPNHIV---LGELSDNLSYEKKPMQILDRKEQVLRNKTISLVKVLWRNHAVEEATW

Query:  ---ERFVNSFLELFK
           E+  + +L++F+
Subjt:  ---ERFVNSFLELFK

XP_038874243.1 uncharacterized protein LOC120066978 [Benincasa hispida]2.3e-1346.53Show/hide
Query:  EVVERDPLSFGCGIGSFMYPSSLPRR--------HMPTSFRFGLSPNHIVLG---ELSDNLSYEKKPMQILDRKEQVLRNKTISLVKVLWRNHAVEEATW
        E+VER        +G   Y  +LP+         H+P   ++ L+P H+      +L +N+SYE++P++ILDRKEQVLRNK I LVKVLWRNH +EEATW
Subjt:  EVVERDPLSFGCGIGSFMYPSSLPRR--------HMPTSFRFGLSPNHIVLG---ELSDNLSYEKKPMQILDRKEQVLRNKTISLVKVLWRNHAVEEATW

Query:  E
        E
Subjt:  E

XP_038874993.1 uncharacterized protein LOC120067515 [Benincasa hispida]5.1e-1352.27Show/hide
Query:  IGSFMYPSSLPRR--------HMPTSFRFGLSPNHIVLG---ELSDNLSYEKKPMQILDRKEQVLRNKTISLVKVLWRNHAVEEATWE
        IGS  Y  +LP          H+    ++   P+H++     +L +NLSYE++P+QI+DRKEQVLRNKTI LVKVLWRNH VEEATWE
Subjt:  IGSFMYPSSLPRR--------HMPTSFRFGLSPNHIVLG---ELSDNLSYEKKPMQILDRKEQVLRNKTISLVKVLWRNHAVEEATWE

XP_038883959.1 uncharacterized protein LOC120074858 [Benincasa hispida]4.6e-1445.95Show/hide
Query:  EVVER-DPLSFGCGIGSFMYPSSLPR----RHMPTSFRFGLSPNHIVLG---ELSDNLSYEKKPMQILDRKEQVLRNKTISLVKVLWRNHAVEEATW---
        E++ER DP+++   +     P  L R     H+    ++ L P H++     +L +NLSYE++P++ILDRKEQVLRNKTISLVKVLW+NH+ EE TW   
Subjt:  EVVER-DPLSFGCGIGSFMYPSSLPR----RHMPTSFRFGLSPNHIVLG---ELSDNLSYEKKPMQILDRKEQVLRNKTISLVKVLWRNHAVEEATW---

Query:  ERFVNSFLELF
        E+  N +L+LF
Subjt:  ERFVNSFLELF

XP_038889382.1 uncharacterized protein LOC120079301 [Benincasa hispida]4.6e-1446.49Show/hide
Query:  EVVERDPLSFGCGIGSFMYPSSLPRR--------HMPTSFRFGLSPNHIVLGE---LSDNLSYEKKPMQILDRKEQVLRNKTISLVKVLWRNHAVEEATW
        E++ER        + S  Y S LP          H+    ++   P H++  +   L +NLSYEKKP++ILDR EQVLRNKTI LVKVLWRNH+ EEATW
Subjt:  EVVERDPLSFGCGIGSFMYPSSLPRR--------HMPTSFRFGLSPNHIVLGE---LSDNLSYEKKPMQILDRKEQVLRNKTISLVKVLWRNHAVEEATW

Query:  ---ERFVNSFLELF
           E+  N FL+LF
Subjt:  ---ERFVNSFLELF

TrEMBL top hitse value%identityAlignment
A0A5A7U0P3 Retrotransposable element Tf23.5e-1251.14Show/hide
Query:  IGSFMYPSSLPRR--------HMPTSFRFGLSPNHIVLGE---LSDNLSYEKKPMQILDRKEQVLRNKTISLVKVLWRNHAVEEATWE
        IG   Y S+LP          H+    ++   P+HI+  E   L +NLSYE++P+QILD+KEQVLRNK I LVKVLWRNH  EE TWE
Subjt:  IGSFMYPSSLPRR--------HMPTSFRFGLSPNHIVLGE---LSDNLSYEKKPMQILDRKEQVLRNKTISLVKVLWRNHAVEEATWE

A0A5A7UE01 Reverse transcriptase4.6e-1245.45Show/hide
Query:  FMYPSSLPRRHMPTSFRFGLSPNHIVLGELSDNLSYEKKPMQILDRKEQVLRNKTISLVKVLWRNHAVEEATWERFVN---SFLELFK
        F+ P  +  R  P ++R  L P+   + ++S+NLSYE++P+++L R+ + LR++ ISLVKVLW+NH VEEATWER  N    + ELF+
Subjt:  FMYPSSLPRRHMPTSFRFGLSPNHIVLGELSDNLSYEKKPMQILDRKEQVLRNKTISLVKVLWRNHAVEEATWERFVN---SFLELFK

A0A5D3BBD8 Retrovirus-related Pol polyprotein from transposon opus4.6e-1251.14Show/hide
Query:  IGSFMYPSSLPRR--------HMPTSFRFGLSPNHIVLGE---LSDNLSYEKKPMQILDRKEQVLRNKTISLVKVLWRNHAVEEATWE
        IG   Y S+LP          H+    ++ L P HI+  E   L +NLSYE++P+QILD+KEQVLRNK I LVKVLWRNH  +E TWE
Subjt:  IGSFMYPSSLPRR--------HMPTSFRFGLSPNHIVLGE---LSDNLSYEKKPMQILDRKEQVLRNKTISLVKVLWRNHAVEEATWE

A0A5D3BSV9 Reverse transcriptase4.6e-1245.45Show/hide
Query:  FMYPSSLPRRHMPTSFRFGLSPNHIVLGELSDNLSYEKKPMQILDRKEQVLRNKTISLVKVLWRNHAVEEATWERFVN---SFLELFK
        F+ P  +  R  P ++R  L P+   + ++S+NLSYE++P+++L R+ + LR++ ISLVKVLW+NH VEEATWER  N    + ELF+
Subjt:  FMYPSSLPRRHMPTSFRFGLSPNHIVLGELSDNLSYEKKPMQILDRKEQVLRNKTISLVKVLWRNHAVEEATWERFVN---SFLELFK

A0A7N2LKR8 Reverse transcriptase4.2e-1351.69Show/hide
Query:  IGSFMYPSSLPRR--------HMPTSFRFGLSPNHIVLGE---LSDNLSYEKKPMQILDRKEQVLRNKTISLVKVLWRNHAVEEATWER
        +GS  Y  +LP          H+    R+   P+HI+  E   + +NLSYE+ P+QILD KEQVLRNKTI+LVKVLWRNH++EEA+WER
Subjt:  IGSFMYPSSLPRR--------HMPTSFRFGLSPNHIVLGE---LSDNLSYEKKPMQILDRKEQVLRNKTISLVKVLWRNHAVEEATWER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATAGGCTCGGTCGGCTACACTTCTGATCCTGTTTTTGTCGGGAGTCGTGGTCGCGTTGTCGCTGACGTGGTGACTGTAGGGGATGTGAATCTCGGAGCAGAAGT
AGTAGAACGCGATCCCCTCTCATTCGGATGTGGTATCGGTTCATTCATGTACCCCTCCTCTCTACCCAGGCGTCACATGCCCACTAGTTTCCGCTTTGGTTTGTCCCCGA
ACCACATCGTACTGGGAGAGTTAAGTGATAACTTGTCATATGAAAAGAAGCCGATGCAGATTTTAGACAGAAAAGAACAGGTGTTACGAAATAAGACTATTTCATTGGTT
AAAGTCTTGTGGAGGAATCATGCAGTAGAAGAGGCAACCTGGGAAAGATTTGTGAATTCATTCCTTGAGTTATTTAAGAGGAGAAGGAATGTAATGTTAGCAAATGAAGG
GGGTATGGACTGCTGTAGAAGGAAGGTGTTTATCATTGTTTTCTCCACCAGGCTGTACCTGAATTTAAAAGAGATAGCCGACCAGTTTCTGCCTCTCAGCGTCTCAGAAC
TTGCATATCATTTTTCAAAGCCCGATATTTCTGGGTTCGTCCCAGTGGCCTTCATTTTTCCTCTTCTGGGGTCACACTCTCGAGACTTCGAGCTTTGGGAGTCTGCCCGG
GTTTTAGGTTTCCAACCTATCGGCAGCTTGGACACGCCGGTCAAGTCTTCAGATCTTTTGGCTCTCGGTTGCTTGATGTTTGGGAACCATCCATCATGGCTAGCGGTTGA
GCGATCTGACAGACTTCGCGATGATAGCTGTAATTCCCACCAACGACGCCAACTGTTGACTCGAAAATCTACCAAGGCACGGGACGACCTGGGAGATTGGTCAGCACTAG
AATTTGTCTTCTGGGGGTACCTGCAAAACGGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGATAGGCTCGGTCGGCTACACTTCTGATCCTGTTTTTGTCGGGAGTCGTGGTCGCGTTGTCGCTGACGTGGTGACTGTAGGGGATGTGAATCTCGGAGCAGAAGT
AGTAGAACGCGATCCCCTCTCATTCGGATGTGGTATCGGTTCATTCATGTACCCCTCCTCTCTACCCAGGCGTCACATGCCCACTAGTTTCCGCTTTGGTTTGTCCCCGA
ACCACATCGTACTGGGAGAGTTAAGTGATAACTTGTCATATGAAAAGAAGCCGATGCAGATTTTAGACAGAAAAGAACAGGTGTTACGAAATAAGACTATTTCATTGGTT
AAAGTCTTGTGGAGGAATCATGCAGTAGAAGAGGCAACCTGGGAAAGATTTGTGAATTCATTCCTTGAGTTATTTAAGAGGAGAAGGAATGTAATGTTAGCAAATGAAGG
GGGTATGGACTGCTGTAGAAGGAAGGTGTTTATCATTGTTTTCTCCACCAGGCTGTACCTGAATTTAAAAGAGATAGCCGACCAGTTTCTGCCTCTCAGCGTCTCAGAAC
TTGCATATCATTTTTCAAAGCCCGATATTTCTGGGTTCGTCCCAGTGGCCTTCATTTTTCCTCTTCTGGGGTCACACTCTCGAGACTTCGAGCTTTGGGAGTCTGCCCGG
GTTTTAGGTTTCCAACCTATCGGCAGCTTGGACACGCCGGTCAAGTCTTCAGATCTTTTGGCTCTCGGTTGCTTGATGTTTGGGAACCATCCATCATGGCTAGCGGTTGA
GCGATCTGACAGACTTCGCGATGATAGCTGTAATTCCCACCAACGACGCCAACTGTTGACTCGAAAATCTACCAAGGCACGGGACGACCTGGGAGATTGGTCAGCACTAG
AATTTGTCTTCTGGGGGTACCTGCAAAACGGGTAG
Protein sequenceShow/hide protein sequence
MGIGSVGYTSDPVFVGSRGRVVADVVTVGDVNLGAEVVERDPLSFGCGIGSFMYPSSLPRRHMPTSFRFGLSPNHIVLGELSDNLSYEKKPMQILDRKEQVLRNKTISLV
KVLWRNHAVEEATWERFVNSFLELFKRRRNVMLANEGGMDCCRRKVFIIVFSTRLYLNLKEIADQFLPLSVSELAYHFSKPDISGFVPVAFIFPLLGSHSRDFELWESAR
VLGFQPIGSLDTPVKSSDLLALGCLMFGNHPSWLAVERSDRLRDDSCNSHQRRQLLTRKSTKARDDLGDWSALEFVFWGYLQNG