| GenBank top hits | e value | %identity | Alignment |
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| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 3.8e-60 | 43.3 | Show/hide |
Query: MSTSIIAMLAVEKLNGENYTQWKTNLNTILVVDDLRFVLTEECPQAPMPNAVRASRDAYDRWIKANDKANVYILASISDVLAKKHERIVTAREIMDSLQD
M+TSI+ +LA EKLNG+NY+ WK+NLNTILVVDDLRFVLTEECPQAP NA R R+AYDRW+KANDKA VYILAS++DVLAKKH+ I TA+ IMDSL++
Subjt: MSTSIIAMLAVEKLNGENYTQWKTNLNTILVVDDLRFVLTEECPQAPMPNAVRASRDAYDRWIKANDKANVYILASISDVLAKKHERIVTAREIMDSLQD
Query: MFGQPSIQARWREPGQLYL-----GISSEEFPTILDKKGRQTLSPQNNSIEVRPQETKFVLSS-------------------------SGSKTFKN-KKN
MFGQPS R +Y G S E +LD ++ N + F+L S + + F+N +
Subjt: MFGQPSIQARWREPGQLYL-----GISSEEFPTILDKKGRQTLSPQNNSIEVRPQETKFVLSS-------------------------SGSKTFKN-KKN
Query: SGKGVKAN-------------------PTAAAATKKGKTKV---------VDKGKCFHYNVDGHCKRNCPKYLAEKKKAK--------------------
GK V+AN P+ A KKGK K DKGKCFH N DGH KRNCPKYLAEKK K
Subjt: SGKGVKAN-------------------PTAAAATKKGKTKV---------VDKGKCFHYNVDGHCKRNCPKYLAEKKKAK--------------------
Query: ------EGATNHVCYSFQGISSWRQLDAGDMTLKVGMGDVVSAVADSPLICIGESKFI
GATNH+C+SFQ SSW++L G++TLKVG G+VVSA A L + +++
Subjt: ------EGATNHVCYSFQGISSWRQLDAGDMTLKVGMGDVVSAVADSPLICIGESKFI
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| KAA0031826.1 gag/pol protein [Cucumis melo var. makuwa] | 2.5e-59 | 41.92 | Show/hide |
Query: MSTSIIAMLAVEKLNGENYTQWKTNLNTILVVDDLRFVLTEECPQAPMPNAVRASRDAYDRWIKANDKANVYILASISDVLAKKHERIVTAREIMDSLQD
M+++ + MLA +KLNG NY WK +NT+L++DDLRFVL EECPQ P NA R R+ Y+RW KAN+KA YILAS+S+VLAKKHE ++TAREIMDSLQ+
Subjt: MSTSIIAMLAVEKLNGENYTQWKTNLNTILVVDDLRFVLTEECPQAPMPNAVRASRDAYDRWIKANDKANVYILASISDVLAKKHERIVTAREIMDSLQD
Query: MFGQPSIQ-----------ARWREPGQLYLGI------------------SSEEFPTILDKKGRQTLSPQNNSI----------------------EVRP
MFGQ S Q AR E + + + + IL+ L ++N++ +++
Subjt: MFGQPSIQ-----------ARWREPGQLYLGI------------------SSEEFPTILDKKGRQTLSPQNNSI----------------------EVRP
Query: QE-------------------TKFVLSSSGSKTFKNKKNSGKGVKANPTAAAATKKGKTKVVDKGKCFHYNVDGHCKRNCPKYLAEKKKAKE--------
Q+ TK + SSSG+K +K KK G+G KAN AA TKK K KG CFH N +GH KRNCPKYLAEKKKAK+
Subjt: QE-------------------TKFVLSSSGSKTFKNKKNSGKGVKANPTAAAATKKGKTKVVDKGKCFHYNVDGHCKRNCPKYLAEKKKAKE--------
Query: ----------------GATNHVCYSFQGISSWRQLDAGDMTLKVGMGDVVSAVADSPL-ICIGES
GATNHVC SFQGISSWRQL+ G+MT++VG G VVSA+A L +C+ +S
Subjt: ----------------GATNHVCYSFQGISSWRQLDAGDMTLKVGMGDVVSAVADSPL-ICIGES
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| KAA0047792.1 gag/pol protein [Cucumis melo var. makuwa] | 2.5e-59 | 41.92 | Show/hide |
Query: MSTSIIAMLAVEKLNGENYTQWKTNLNTILVVDDLRFVLTEECPQAPMPNAVRASRDAYDRWIKANDKANVYILASISDVLAKKHERIVTAREIMDSLQD
M+++ + MLA +KLNG NY WK +NT+L++DDLRFVL EECPQ P NA R R+ Y+RW KAN+KA YILAS+S+VLAKKHE ++TAREIMDSLQ+
Subjt: MSTSIIAMLAVEKLNGENYTQWKTNLNTILVVDDLRFVLTEECPQAPMPNAVRASRDAYDRWIKANDKANVYILASISDVLAKKHERIVTAREIMDSLQD
Query: MFGQPSIQ-----------ARWREPGQLYLGI------------------SSEEFPTILDKKGRQTLSPQNNSI----------------------EVRP
MFGQ S Q AR E + + + + IL+ L ++N++ +++
Subjt: MFGQPSIQ-----------ARWREPGQLYLGI------------------SSEEFPTILDKKGRQTLSPQNNSI----------------------EVRP
Query: QE-------------------TKFVLSSSGSKTFKNKKNSGKGVKANPTAAAATKKGKTKVVDKGKCFHYNVDGHCKRNCPKYLAEKKKAKE--------
Q+ TK + SSSG+K +K KK G+G KAN AA TKK K KG CFH N +GH KRNCPKYLAEKKKAK+
Subjt: QE-------------------TKFVLSSSGSKTFKNKKNSGKGVKANPTAAAATKKGKTKVVDKGKCFHYNVDGHCKRNCPKYLAEKKKAKE--------
Query: ----------------GATNHVCYSFQGISSWRQLDAGDMTLKVGMGDVVSAVADSPL-ICIGES
GATNHVC SFQGISSWRQL+ G+MT++VG G VVSA+A L +C+ +S
Subjt: ----------------GATNHVCYSFQGISSWRQLDAGDMTLKVGMGDVVSAVADSPL-ICIGES
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| KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa] | 2.5e-59 | 41.92 | Show/hide |
Query: MSTSIIAMLAVEKLNGENYTQWKTNLNTILVVDDLRFVLTEECPQAPMPNAVRASRDAYDRWIKANDKANVYILASISDVLAKKHERIVTAREIMDSLQD
M+++ + MLA +KLNG NY WK +NT+L++DDLRFVL EECPQ P NA R R+ Y+RW KAN+KA YILAS+S+VLAKKHE ++TAREIMDSLQ+
Subjt: MSTSIIAMLAVEKLNGENYTQWKTNLNTILVVDDLRFVLTEECPQAPMPNAVRASRDAYDRWIKANDKANVYILASISDVLAKKHERIVTAREIMDSLQD
Query: MFGQPSIQ-----------ARWREPGQLYLGI------------------SSEEFPTILDKKGRQTLSPQNNSI----------------------EVRP
MFGQ S Q AR E + + + + IL+ L ++N++ +++
Subjt: MFGQPSIQ-----------ARWREPGQLYLGI------------------SSEEFPTILDKKGRQTLSPQNNSI----------------------EVRP
Query: QE-------------------TKFVLSSSGSKTFKNKKNSGKGVKANPTAAAATKKGKTKVVDKGKCFHYNVDGHCKRNCPKYLAEKKKAKE--------
Q+ TK + SSSG+K +K KK G+G KAN AA TKK K KG CFH N +GH KRNCPKYLAEKKKAK+
Subjt: QE-------------------TKFVLSSSGSKTFKNKKNSGKGVKANPTAAAATKKGKTKVVDKGKCFHYNVDGHCKRNCPKYLAEKKKAKE--------
Query: ----------------GATNHVCYSFQGISSWRQLDAGDMTLKVGMGDVVSAVADSPL-ICIGES
GATNHVC SFQGISSWRQL+ G+MT++VG G VVSA+A L +C+ +S
Subjt: ----------------GATNHVCYSFQGISSWRQLDAGDMTLKVGMGDVVSAVADSPL-ICIGES
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| TYK14550.1 gag/pol protein [Cucumis melo var. makuwa] | 4.2e-59 | 41.92 | Show/hide |
Query: MSTSIIAMLAVEKLNGENYTQWKTNLNTILVVDDLRFVLTEECPQAPMPNAVRASRDAYDRWIKANDKANVYILASISDVLAKKHERIVTAREIMDSLQD
M+++ + MLA +KLNG NY WK +NT+L++DDLRFVL EECPQ P NA R R+ Y+RW KAN+KA YILAS+S+VLAKKHE ++TAREIMDSLQ+
Subjt: MSTSIIAMLAVEKLNGENYTQWKTNLNTILVVDDLRFVLTEECPQAPMPNAVRASRDAYDRWIKANDKANVYILASISDVLAKKHERIVTAREIMDSLQD
Query: MFGQPSIQ-----------ARWREPGQLYLGI------------------SSEEFPTILDKKGRQTLSPQNNSI----------------------EVRP
MFGQ S Q AR E + + + + IL+ L ++N++ +++
Subjt: MFGQPSIQ-----------ARWREPGQLYLGI------------------SSEEFPTILDKKGRQTLSPQNNSI----------------------EVRP
Query: QE-------------------TKFVLSSSGSKTFKNKKNSGKGVKANPTAAAATKKGKTKVVDKGKCFHYNVDGHCKRNCPKYLAEKKKAKE--------
Q+ TK + SSSG+K +K KK G+G KAN AA TKK K KG CFH N +GH KRNCPKYLAEKKKAK+
Subjt: QE-------------------TKFVLSSSGSKTFKNKKNSGKGVKANPTAAAATKKGKTKVVDKGKCFHYNVDGHCKRNCPKYLAEKKKAKE--------
Query: ----------------GATNHVCYSFQGISSWRQLDAGDMTLKVGMGDVVSAVADSPL-ICIGES
GATNHVC SFQGISSWRQL+ G+MT++VG G VVSA+A L +C+ +S
Subjt: ----------------GATNHVCYSFQGISSWRQLDAGDMTLKVGMGDVVSAVADSPL-ICIGES
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMH8 Gag/pol protein | 1.2e-59 | 41.92 | Show/hide |
Query: MSTSIIAMLAVEKLNGENYTQWKTNLNTILVVDDLRFVLTEECPQAPMPNAVRASRDAYDRWIKANDKANVYILASISDVLAKKHERIVTAREIMDSLQD
M+++ + MLA +KLNG NY WK +NT+L++DDLRFVL EECPQ P NA R R+ Y+RW KAN+KA YILAS+S+VLAKKHE ++TAREIMDSLQ+
Subjt: MSTSIIAMLAVEKLNGENYTQWKTNLNTILVVDDLRFVLTEECPQAPMPNAVRASRDAYDRWIKANDKANVYILASISDVLAKKHERIVTAREIMDSLQD
Query: MFGQPSIQ-----------ARWREPGQLYLGI------------------SSEEFPTILDKKGRQTLSPQNNSI----------------------EVRP
MFGQ S Q AR E + + + + IL+ L ++N++ +++
Subjt: MFGQPSIQ-----------ARWREPGQLYLGI------------------SSEEFPTILDKKGRQTLSPQNNSI----------------------EVRP
Query: QE-------------------TKFVLSSSGSKTFKNKKNSGKGVKANPTAAAATKKGKTKVVDKGKCFHYNVDGHCKRNCPKYLAEKKKAKE--------
Q+ TK + SSSG+K +K KK G+G KAN AA TKK K KG CFH N +GH KRNCPKYLAEKKKAK+
Subjt: QE-------------------TKFVLSSSGSKTFKNKKNSGKGVKANPTAAAATKKGKTKVVDKGKCFHYNVDGHCKRNCPKYLAEKKKAKE--------
Query: ----------------GATNHVCYSFQGISSWRQLDAGDMTLKVGMGDVVSAVADSPL-ICIGES
GATNHVC SFQGISSWRQL+ G+MT++VG G VVSA+A L +C+ +S
Subjt: ----------------GATNHVCYSFQGISSWRQLDAGDMTLKVGMGDVVSAVADSPL-ICIGES
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| A0A5A7TWB9 Gag/pol protein | 1.2e-59 | 41.92 | Show/hide |
Query: MSTSIIAMLAVEKLNGENYTQWKTNLNTILVVDDLRFVLTEECPQAPMPNAVRASRDAYDRWIKANDKANVYILASISDVLAKKHERIVTAREIMDSLQD
M+++ + MLA +KLNG NY WK +NT+L++DDLRFVL EECPQ P NA R R+ Y+RW KAN+KA YILAS+S+VLAKKHE ++TAREIMDSLQ+
Subjt: MSTSIIAMLAVEKLNGENYTQWKTNLNTILVVDDLRFVLTEECPQAPMPNAVRASRDAYDRWIKANDKANVYILASISDVLAKKHERIVTAREIMDSLQD
Query: MFGQPSIQ-----------ARWREPGQLYLGI------------------SSEEFPTILDKKGRQTLSPQNNSI----------------------EVRP
MFGQ S Q AR E + + + + IL+ L ++N++ +++
Subjt: MFGQPSIQ-----------ARWREPGQLYLGI------------------SSEEFPTILDKKGRQTLSPQNNSI----------------------EVRP
Query: QE-------------------TKFVLSSSGSKTFKNKKNSGKGVKANPTAAAATKKGKTKVVDKGKCFHYNVDGHCKRNCPKYLAEKKKAKE--------
Q+ TK + SSSG+K +K KK G+G KAN AA TKK K KG CFH N +GH KRNCPKYLAEKKKAK+
Subjt: QE-------------------TKFVLSSSGSKTFKNKKNSGKGVKANPTAAAATKKGKTKVVDKGKCFHYNVDGHCKRNCPKYLAEKKKAKE--------
Query: ----------------GATNHVCYSFQGISSWRQLDAGDMTLKVGMGDVVSAVADSPL-ICIGES
GATNHVC SFQGISSWRQL+ G+MT++VG G VVSA+A L +C+ +S
Subjt: ----------------GATNHVCYSFQGISSWRQLDAGDMTLKVGMGDVVSAVADSPL-ICIGES
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| A0A5A7UGV2 Gag/pol protein | 1.2e-59 | 41.92 | Show/hide |
Query: MSTSIIAMLAVEKLNGENYTQWKTNLNTILVVDDLRFVLTEECPQAPMPNAVRASRDAYDRWIKANDKANVYILASISDVLAKKHERIVTAREIMDSLQD
M+++ + MLA +KLNG NY WK +NT+L++DDLRFVL EECPQ P NA R R+ Y+RW KAN+KA YILAS+S+VLAKKHE ++TAREIMDSLQ+
Subjt: MSTSIIAMLAVEKLNGENYTQWKTNLNTILVVDDLRFVLTEECPQAPMPNAVRASRDAYDRWIKANDKANVYILASISDVLAKKHERIVTAREIMDSLQD
Query: MFGQPSIQ-----------ARWREPGQLYLGI------------------SSEEFPTILDKKGRQTLSPQNNSI----------------------EVRP
MFGQ S Q AR E + + + + IL+ L ++N++ +++
Subjt: MFGQPSIQ-----------ARWREPGQLYLGI------------------SSEEFPTILDKKGRQTLSPQNNSI----------------------EVRP
Query: QE-------------------TKFVLSSSGSKTFKNKKNSGKGVKANPTAAAATKKGKTKVVDKGKCFHYNVDGHCKRNCPKYLAEKKKAKE--------
Q+ TK + SSSG+K +K KK G+G KAN AA TKK K KG CFH N +GH KRNCPKYLAEKKKAK+
Subjt: QE-------------------TKFVLSSSGSKTFKNKKNSGKGVKANPTAAAATKKGKTKVVDKGKCFHYNVDGHCKRNCPKYLAEKKKAKE--------
Query: ----------------GATNHVCYSFQGISSWRQLDAGDMTLKVGMGDVVSAVADSPL-ICIGES
GATNHVC SFQGISSWRQL+ G+MT++VG G VVSA+A L +C+ +S
Subjt: ----------------GATNHVCYSFQGISSWRQLDAGDMTLKVGMGDVVSAVADSPL-ICIGES
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| A0A5D3CPJ6 Gag/pol protein | 2.0e-59 | 41.92 | Show/hide |
Query: MSTSIIAMLAVEKLNGENYTQWKTNLNTILVVDDLRFVLTEECPQAPMPNAVRASRDAYDRWIKANDKANVYILASISDVLAKKHERIVTAREIMDSLQD
M+++ + MLA +KLNG NY WK +NT+L++DDLRFVL EECPQ P NA R R+ Y+RW KAN+KA YILAS+S+VLAKKHE ++TAREIMDSLQ+
Subjt: MSTSIIAMLAVEKLNGENYTQWKTNLNTILVVDDLRFVLTEECPQAPMPNAVRASRDAYDRWIKANDKANVYILASISDVLAKKHERIVTAREIMDSLQD
Query: MFGQPSIQ-----------ARWREPGQLYLGI------------------SSEEFPTILDKKGRQTLSPQNNSI----------------------EVRP
MFGQ S Q AR E + + + + IL+ L ++N++ +++
Subjt: MFGQPSIQ-----------ARWREPGQLYLGI------------------SSEEFPTILDKKGRQTLSPQNNSI----------------------EVRP
Query: QE-------------------TKFVLSSSGSKTFKNKKNSGKGVKANPTAAAATKKGKTKVVDKGKCFHYNVDGHCKRNCPKYLAEKKKAKE--------
Q+ TK + SSSG+K +K KK G+G KAN AA TKK K KG CFH N +GH KRNCPKYLAEKKKAK+
Subjt: QE-------------------TKFVLSSSGSKTFKNKKNSGKGVKANPTAAAATKKGKTKVVDKGKCFHYNVDGHCKRNCPKYLAEKKKAKE--------
Query: ----------------GATNHVCYSFQGISSWRQLDAGDMTLKVGMGDVVSAVADSPL-ICIGES
GATNHVC SFQGISSWRQL+ G+MT++VG G VVSA+A L +C+ +S
Subjt: ----------------GATNHVCYSFQGISSWRQLDAGDMTLKVGMGDVVSAVADSPL-ICIGES
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| E2GK51 Gag/pol protein (Fragment) | 1.8e-60 | 43.3 | Show/hide |
Query: MSTSIIAMLAVEKLNGENYTQWKTNLNTILVVDDLRFVLTEECPQAPMPNAVRASRDAYDRWIKANDKANVYILASISDVLAKKHERIVTAREIMDSLQD
M+TSI+ +LA EKLNG+NY+ WK+NLNTILVVDDLRFVLTEECPQAP NA R R+AYDRW+KANDKA VYILAS++DVLAKKH+ I TA+ IMDSL++
Subjt: MSTSIIAMLAVEKLNGENYTQWKTNLNTILVVDDLRFVLTEECPQAPMPNAVRASRDAYDRWIKANDKANVYILASISDVLAKKHERIVTAREIMDSLQD
Query: MFGQPSIQARWREPGQLYL-----GISSEEFPTILDKKGRQTLSPQNNSIEVRPQETKFVLSS-------------------------SGSKTFKN-KKN
MFGQPS R +Y G S E +LD ++ N + F+L S + + F+N +
Subjt: MFGQPSIQARWREPGQLYL-----GISSEEFPTILDKKGRQTLSPQNNSIEVRPQETKFVLSS-------------------------SGSKTFKN-KKN
Query: SGKGVKAN-------------------PTAAAATKKGKTKV---------VDKGKCFHYNVDGHCKRNCPKYLAEKKKAK--------------------
GK V+AN P+ A KKGK K DKGKCFH N DGH KRNCPKYLAEKK K
Subjt: SGKGVKAN-------------------PTAAAATKKGKTKV---------VDKGKCFHYNVDGHCKRNCPKYLAEKKKAK--------------------
Query: ------EGATNHVCYSFQGISSWRQLDAGDMTLKVGMGDVVSAVADSPLICIGESKFI
GATNH+C+SFQ SSW++L G++TLKVG G+VVSA A L + +++
Subjt: ------EGATNHVCYSFQGISSWRQLDAGDMTLKVGMGDVVSAVADSPLICIGESKFI
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