; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc01g01120 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g01120
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr1:824865..827469
RNA-Seq ExpressionMoc01g01120
SyntenyMoc01g01120
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049769.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]3.3e-4732.66Show/hide
Query:  MVMAVLSRMLNRLPPSFRFHEKCDGVALTHLCFADDLMIFSRADFGVGMLVQGGIWPSGFGTRSSPSFRFHEKCDGVALTHLCFADDLMIFSRADFGSLS
        MVM VLSRMLN++P SF+FH +C+ V LTHL FADDLMIF  AD                     PS RF  +C                          
Subjt:  MVMAVLSRMLNRLPPSFRFHEKCDGVALTHLCFADDLMIFSRADFGVGMLVQGGIWPSGFGTRSSPSFRFHEKCDGVALTHLCFADDLMIFSRADFGSLS

Query:  FVNNVLASFGELAGLVANTRKSSFFGTGIPDVEVEQLAAFSDFSVTSFPVRYLGVPLFSCRLSHHDCQPLLEQIVSRVWSWSARMFSFASRLQLIQSILQ
             L  FGEL+GL AN RKS  F  G+ +    QLAA   F   + PVRYLG+PL + RL  +DC P++++I SR+ SW AR+ SFA RLQL+ S+L+
Subjt:  FVNNVLASFGELAGLVANTRKSSFFGTGIPDVEVEQLAAFSDFSVTSFPVRYLGVPLFSCRLSHHDCQPLLEQIVSRVWSWSARMFSFASRLQLIQSILQ

Query:  SFQSRESRKVV-------ECASLGFLEFGHYNEAA------LVALYVGWLYMGWL--YV------------------------GGLIFFLSE-MLFD---
        S Q   +   V       E   L   +   +N A+      L+   +G L++ W+  Y+                        G ++  + E +L+D   
Subjt:  SFQSRESRKVV-------ECASLGFLEFGHYNEAA------LVALYVGWLYMGWL--YV------------------------GGLIFFLSE-MLFD---

Query:  ----------------LWFDLRLEMVSVVLFGMTLGFWMSDLSKDWREDVLVWIPKSSGLFSVSSAWDVLRPTQPLVPWFSSLWFSGNISKHSFIAWLAV
                        LW  + LE++++      +   +S +S  W     VW+P   G FS++SAW  +RP    V W   LW   NI KHSF AWLA+
Subjt:  ----------------LWFDLRLEMVSVVLFGMTLGFWMSDLSKDWREDVLVWIPKSSGLFSVSSAWDVLRPTQPLVPWFSSLWFSGNISKHSFIAWLAV

Query:  RDRLAT----------------VSYWSIDLAWICHINAGQSVRRRVW
        +DRL T                + +W ++L+WICH   G+ VR ++W
Subjt:  RDRLAT----------------VSYWSIDLAWICHINAGQSVRRRVW

XP_022149381.1 uncharacterized protein LOC111017811 [Momordica charantia]2.0e-16199.65Show/hide
Query:  RSSPSFRFHEKCDGVALTHLCFADDLMIFSRADFGSLSFVNNVLASFGELAGLVANTRKSSFFGTGIPDVEVEQLAAFSDFSVTSFPVRYLGVPLFSCRL
        RSSPSFRFHEKCDGVALTHLCFADDLMIFSRADFGSLSFVNNVLASFGELAGLVANTRKSSFFGTGIPDVEVEQLAAFSDFSVTSFPVRYLGVPLFSCRL
Subjt:  RSSPSFRFHEKCDGVALTHLCFADDLMIFSRADFGSLSFVNNVLASFGELAGLVANTRKSSFFGTGIPDVEVEQLAAFSDFSVTSFPVRYLGVPLFSCRL

Query:  SHHDCQPLLEQIVSRVWSWSARMFSFASRLQLIQSILQSFQSRESRKVVECASLGFLEFGHYNEAALVALYVGWLYMGWLYVGGLIFFLSEMLFDLWFDL
        SHHDCQPLLEQIVSRVWSWSARMFSFASRLQLIQSILQSFQSRESRKVVECASLGFLEFGHYNEAALVALYVGWLYMGWLYVGGLIFFLSEMLFDLWFDL
Subjt:  SHHDCQPLLEQIVSRVWSWSARMFSFASRLQLIQSILQSFQSRESRKVVECASLGFLEFGHYNEAALVALYVGWLYMGWLYVGGLIFFLSEMLFDLWFDL

Query:  RLEMVSVVLFGMTLGFWMSDLSKDWREDVLVWIPKSSGLFSVSSAWDVLRPTQPLVPWFSSLWFSGNISKHSFIAWLAVRDRLATV
        RLEMVSVVLFGMTLGFWMSDLSKDWREDVLVWIPKSSGLFSVSSAWDVLRPTQPLVPWFSSLWFSGNISKHSFIAWLAVRDRLAT+
Subjt:  RLEMVSVVLFGMTLGFWMSDLSKDWREDVLVWIPKSSGLFSVSSAWDVLRPTQPLVPWFSSLWFSGNISKHSFIAWLAVRDRLATV

XP_022157473.1 uncharacterized protein LOC111024165 [Momordica charantia]2.1e-4943.18Show/hide
Query:  RSSPSFRFHEKCDGVALTHLCFADDLMIFSRADFGSLSFVNNVLASFGELAGLVANTRKSSFFGTGIPDVEVEQLAAFSDFSVTSFPVRYLGVPLFSCRL
        ++   FRFH KC+ V L HLCF DDLMI S  D GSLSF+ +V  SF +   LV        FG G+P VE ++LAAF  FSV S  VRYLGV L S R+
Subjt:  RSSPSFRFHEKCDGVALTHLCFADDLMIFSRADFGSLSFVNNVLASFGELAGLVANTRKSSFFGTGIPDVEVEQLAAFSDFSVTSFPVRYLGVPLFSCRL

Query:  SHHDCQPLLEQIVSRVWSWSARMFSFASRLQLIQSILQSFQSRESRKVVECASLGFLEFGHYNEAALVALYVGWLYMGWLYVGGLIFFLSEMLFDLWFDL
        SHHDC+PLLE+I+ RV +WSARM SFAS L LI+ + QSFQ                                      +Y   +    + +L D     
Subjt:  SHHDCQPLLEQIVSRVWSWSARMFSFASRLQLIQSILQSFQSRESRKVVECASLGFLEFGHYNEAALVALYVGWLYMGWLYVGGLIFFLSEMLFDLWFDL

Query:  RLEMVSVVLFGMTLGFWMSDLSKDWREDVLVW--IPKSSGLFSVSSAWDVLRPTQPLVPWFSSLWFSGNISKHSFIAWLAVRDRLAT---VSYWSIDLAW
            V  +L      F        W    + W  I  SSGLFSVS+A DVLRP +P VPWFS +WF GNI KHSFIAWLA+RDRLAT   +  W   +  
Subjt:  RLEMVSVVLFGMTLGFWMSDLSKDWREDVLVW--IPKSSGLFSVSSAWDVLRPTQPLVPWFSSLWFSGNISKHSFIAWLAVRDRLAT---VSYWSIDLAW

Query:  ICHINAGQ
         C    GQ
Subjt:  ICHINAGQ

XP_031737043.1 uncharacterized protein LOC116402131 [Cucumis sativus]2.9e-5131.02Show/hide
Query:  SFRFHEKCDGVALTHLCFADDLMIFSRADFGSLSFVNNVLASFGELAGLVANTRKSSFFGTGIPDVEVEQLAAFSDFSVTSFPVRYLGVPLFSCRLSHHD
        +F+FH+ C+ V LTHL FADDLMIF  AD  S+SF+   +  FGEL+GL AN  KSS F  G+   +  +LAA   FS+   PVRYLG+PL   RL   D
Subjt:  SFRFHEKCDGVALTHLCFADDLMIFSRADFGSLSFVNNVLASFGELAGLVANTRKSSFFGTGIPDVEVEQLAAFSDFSVTSFPVRYLGVPLFSCRLSHHD

Query:  CQPLLEQIVSRVWSWSARMFSFASRLQLIQSILQSFQ-------------SRESRKVVEC--------------------------ASLGFLEFGHYNEA
        C PL+++I SR+ SWSAR+ SFA RLQL++S+L+S Q              R+  K++                              L   +   +N A
Subjt:  CQPLLEQIVSRVWSWSARMFSFASRLQLIQSILQSFQ-------------SRESRKVVEC--------------------------ASLGFLEFGHYNEA

Query:  ALV-----------ALYVGWL---------YMGWLYVGGL-IFFLSEMLFDLWFDLRLEMVSVVLFGMTLG-------------------------FWMS
        + +           +L+V W+          +GW+ +G L +  +S +   L    R  M   +  G   G                         F + 
Subjt:  ALV-----------ALYVGWL---------YMGWLYVGGL-IFFLSEMLFDLWFDLRLEMVSVVLFGMTLG-------------------------FWMS

Query:  DLSKDWR------------------------EDVLVWIPKSSGLFSVSSAWDVLRPTQPLVPWFSSLWFSGNISKHSFIAWLAVRDRLAT----------
        D   DWR                        ED  VW+P S   FS++SAW+ +RP    V W   LW  GNI KHSF AWLA+RDRL T          
Subjt:  DLSKDWR------------------------EDVLVWIPKSSGLFSVSSAWDVLRPTQPLVPWFSSLWFSGNISKHSFIAWLAVRDRLAT----------

Query:  -----------------------------------------VSYWSIDLAWICHINAGQSVRRRVWCLAWTSTVSFNWRERNARVHGGGV
                                                 + YW ++L+WIC+   G+ VRR++W L W +T+ F W+ERN  +HGG V
Subjt:  -----------------------------------------VSYWSIDLAWICHINAGQSVRRRVWCLAWTSTVSFNWRERNARVHGGGV

XP_038888122.1 uncharacterized protein LOC120078021 [Benincasa hispida]1.4e-4542.35Show/hide
Query:  FRFHEKCDGVALTHLCFADDLMIFSRADFGSLSFVNNVLASFGELAGLVANTRKSSFFGTGIPDVEVEQLAAFSDFSVTSFPVRYLGVPLFSCRLSHHDC
        FRFH++C+ V LTHL F DDLMIF  A   SL FV  VLA F  L+GLVAN   SS F  G+   + E+LAAF  FS+ S  VRYLG+PL + RL   DC
Subjt:  FRFHEKCDGVALTHLCFADDLMIFSRADFGSLSFVNNVLASFGELAGLVANTRKSSFFGTGIPDVEVEQLAAFSDFSVTSFPVRYLGVPLFSCRLSHHDC

Query:  QPLLEQIVSRVWSWSARMFSFASRLQLIQSILQSFQSRESRKVVECASLGFLEFGHYNEAALVALYVGWLYMGWLYVGGLIFFLSEMLFDLWFDLRLEMV
         PL+++I +R+ SW+AR  SFA RLQLI+S+LQSFQ                             +V W    WL        L + + D +        
Subjt:  QPLLEQIVSRVWSWSARMFSFASRLQLIQSILQSFQSRESRKVVECASLGFLEFGHYNEAALVALYVGWLYMGWLYVGGLIFFLSEMLFDLWFDLRLEMV

Query:  SVVLFGMTLGFWMSDLSKDWREDVLVWIPKSSGLFSVSSAWDVLRPTQPLVPWFSSLWFSGNISKHSFIAWLAVRDRLATV
        S+V++    G  +   SK   ED  VW+  +SG FS++SAW+ L P +P V W   LW  G I +H F AWLAVRDR+  V
Subjt:  SVVLFGMTLGFWMSDLSKDWREDVLVWIPKSSGLFSVSSAWDVLRPTQPLVPWFSSLWFSGNISKHSFIAWLAVRDRLATV

TrEMBL top hitse value%identityAlignment
A0A5A7U8G1 Non-LTR retroelement reverse transcriptase-like protein1.6e-4732.66Show/hide
Query:  MVMAVLSRMLNRLPPSFRFHEKCDGVALTHLCFADDLMIFSRADFGVGMLVQGGIWPSGFGTRSSPSFRFHEKCDGVALTHLCFADDLMIFSRADFGSLS
        MVM VLSRMLN++P SF+FH +C+ V LTHL FADDLMIF  AD                     PS RF  +C                          
Subjt:  MVMAVLSRMLNRLPPSFRFHEKCDGVALTHLCFADDLMIFSRADFGVGMLVQGGIWPSGFGTRSSPSFRFHEKCDGVALTHLCFADDLMIFSRADFGSLS

Query:  FVNNVLASFGELAGLVANTRKSSFFGTGIPDVEVEQLAAFSDFSVTSFPVRYLGVPLFSCRLSHHDCQPLLEQIVSRVWSWSARMFSFASRLQLIQSILQ
             L  FGEL+GL AN RKS  F  G+ +    QLAA   F   + PVRYLG+PL + RL  +DC P++++I SR+ SW AR+ SFA RLQL+ S+L+
Subjt:  FVNNVLASFGELAGLVANTRKSSFFGTGIPDVEVEQLAAFSDFSVTSFPVRYLGVPLFSCRLSHHDCQPLLEQIVSRVWSWSARMFSFASRLQLIQSILQ

Query:  SFQSRESRKVV-------ECASLGFLEFGHYNEAA------LVALYVGWLYMGWL--YV------------------------GGLIFFLSE-MLFD---
        S Q   +   V       E   L   +   +N A+      L+   +G L++ W+  Y+                        G ++  + E +L+D   
Subjt:  SFQSRESRKVV-------ECASLGFLEFGHYNEAA------LVALYVGWLYMGWL--YV------------------------GGLIFFLSE-MLFD---

Query:  ----------------LWFDLRLEMVSVVLFGMTLGFWMSDLSKDWREDVLVWIPKSSGLFSVSSAWDVLRPTQPLVPWFSSLWFSGNISKHSFIAWLAV
                        LW  + LE++++      +   +S +S  W     VW+P   G FS++SAW  +RP    V W   LW   NI KHSF AWLA+
Subjt:  ----------------LWFDLRLEMVSVVLFGMTLGFWMSDLSKDWREDVLVWIPKSSGLFSVSSAWDVLRPTQPLVPWFSSLWFSGNISKHSFIAWLAV

Query:  RDRLAT----------------VSYWSIDLAWICHINAGQSVRRRVW
        +DRL T                + +W ++L+WICH   G+ VR ++W
Subjt:  RDRLAT----------------VSYWSIDLAWICHINAGQSVRRRVW

A0A5A7UV01 F17F8.57.4e-4530.79Show/hide
Query:  MVMAVLSRMLNRLPPSFRFHEKCDGVALTHLCFADDLMIFSRADFGVGMLVQGGIWPSGFGTRSSPSFRFHEKCDGVALTHLCFADDLMIFSRADFGSLS
        MVM VLSRMLN++P SF+FH +C+ V LT+L FADDLMIF  AD                     PS RF  +C                          
Subjt:  MVMAVLSRMLNRLPPSFRFHEKCDGVALTHLCFADDLMIFSRADFGVGMLVQGGIWPSGFGTRSSPSFRFHEKCDGVALTHLCFADDLMIFSRADFGSLS

Query:  FVNNVLASFGELAGLVANTRKSSFFGTGIPDVEVEQLAAFSDFSVTSFPVRYLGVPLFSCRLSHHDCQPLLEQIVSRVWSWSARMFSFASRLQLIQSILQ
             L  FGEL+GL AN RKSS F  G+ +     LAA   F   + P+RYLG+PL + RL  +D  PL+++I SR+ SW+AR+ SFA RLQL++ +L+
Subjt:  FVNNVLASFGELAGLVANTRKSSFFGTGIPDVEVEQLAAFSDFSVTSFPVRYLGVPLFSCRLSHHDCQPLLEQIVSRVWSWSARMFSFASRLQLIQSILQ

Query:  SFQ----------------------------SRESRKVVECA-----------SLGFLEFGHYNEAALV-----------ALYVGWL-------------
        S Q                              E R  ++ A            LG  +   +N A+ +           +L+V W+             
Subjt:  SFQ----------------------------SRESRKVVECA-----------SLGFLEFGHYNEAALV-----------ALYVGWL-------------

Query:  ---------------------YMGWLYVGGLIFFLSEMLFDLWF--DLRLEMVSVVLFGMTLGFWMSDLSKDWREDVLVWIPKSSGLFSVSSAWDVLRPT
                             ++ W+ VG        +  D W   D  LE V   +       W      D+ +    W+    G FS++SAW+ +RP 
Subjt:  ---------------------YMGWLYVGGLIFFLSEMLFDLWF--DLRLEMVSVVLFGMTLGFWMSDLSKDWREDVLVWIPKSSGLFSVSSAWDVLRPT

Query:  QPLVPWFSSLWFSGNISKHSFIAWLAVRDRLATVS----YWSIDLAWICHINAGQSVRRRVWCLAWTSTVSFNWRERNARVHGG
           V W   LW  GNI K+SF AWLA++DRL T      YW             +SVRR++W + W +T+ F W ERN R+HGG
Subjt:  QPLVPWFSSLWFSGNISKHSFIAWLAVRDRLATVS----YWSIDLAWICHINAGQSVRRRVWCLAWTSTVSFNWRERNARVHGG

A0A5A7V2L9 Putative reverse transcriptase2.6e-4232.1Show/hide
Query:  SFRFHEKCDGVALTHLCFADDLMIFSRADFGSLSFVNNVLASFGELAGLVANTRKSSFFGTGIPDVEVEQLAAFSDFSVTSFPVRYLGVPLFSCRLSHHD
        SF FH +C+ V L HL FADDLMIF  AD  SL F+   L  FGEL+GL  N  K+S F  G+       LAA   F + + PVRYLG+PL S RL   D
Subjt:  SFRFHEKCDGVALTHLCFADDLMIFSRADFGSLSFVNNVLASFGELAGLVANTRKSSFFGTGIPDVEVEQLAAFSDFSVTSFPVRYLGVPLFSCRLSHHD

Query:  CQPLLEQIVSRVWSWSARMFSFASRLQLIQSILQSFQ----------------------------SRESRKVVECA----SLGFLEFG-------HYNEA
        C PL+++I SR+ SW AR+FSFA RLQLI+ +L+S Q                              E R  V+ A     L F E G        +N A
Subjt:  CQPLLEQIVSRVWSWSARMFSFASRLQLIQSILQSFQ----------------------------SRESRKVVECA----SLGFLEFG-------HYNEA

Query:  ALV-----------ALYVGWLYMGWLYVGGLIFFLSEMLFDLWF---------DLRLEMVSVVLFGMTLGFWMSD-------LSKDWR-----EDVLVWI
        + +           +L+V W+   ++  G  ++ +   +   W           L+ ++   V  G T   W+         L ++        D  VW+
Subjt:  ALV-----------ALYVGWLYMGWLYVGGLIFFLSEMLFDLWF---------DLRLEMVSVVLFGMTLGFWMSD-------LSKDWR-----EDVLVWI

Query:  PKSSGLFSVSSAWDVLRPTQPLVPW-----------FS-----SLWFSGNISKHSFIAWLAVRDRLAT---VSYWSIDLAWICHINAGQSVRRRVWCLAW
            G FS++SAW+ +RP    V W           FS     SL  + +        W  V   +A+   + +W ++L+WICH   G+ VRR++W + W
Subjt:  PKSSGLFSVSSAWDVLRPTQPLVPW-----------FS-----SLWFSGNISKHSFIAWLAVRDRLAT---VSYWSIDLAWICHINAGQSVRRRVWCLAW

Query:  TSTVSFNWRERNARVHGGGVGRSPSA---LLCT
         +T+ + W ERN R+H GG  R P     L+CT
Subjt:  TSTVSFNWRERNARVHGGGVGRSPSA---LLCT

A0A6J1D875 uncharacterized protein LOC1110178119.6e-16299.65Show/hide
Query:  RSSPSFRFHEKCDGVALTHLCFADDLMIFSRADFGSLSFVNNVLASFGELAGLVANTRKSSFFGTGIPDVEVEQLAAFSDFSVTSFPVRYLGVPLFSCRL
        RSSPSFRFHEKCDGVALTHLCFADDLMIFSRADFGSLSFVNNVLASFGELAGLVANTRKSSFFGTGIPDVEVEQLAAFSDFSVTSFPVRYLGVPLFSCRL
Subjt:  RSSPSFRFHEKCDGVALTHLCFADDLMIFSRADFGSLSFVNNVLASFGELAGLVANTRKSSFFGTGIPDVEVEQLAAFSDFSVTSFPVRYLGVPLFSCRL

Query:  SHHDCQPLLEQIVSRVWSWSARMFSFASRLQLIQSILQSFQSRESRKVVECASLGFLEFGHYNEAALVALYVGWLYMGWLYVGGLIFFLSEMLFDLWFDL
        SHHDCQPLLEQIVSRVWSWSARMFSFASRLQLIQSILQSFQSRESRKVVECASLGFLEFGHYNEAALVALYVGWLYMGWLYVGGLIFFLSEMLFDLWFDL
Subjt:  SHHDCQPLLEQIVSRVWSWSARMFSFASRLQLIQSILQSFQSRESRKVVECASLGFLEFGHYNEAALVALYVGWLYMGWLYVGGLIFFLSEMLFDLWFDL

Query:  RLEMVSVVLFGMTLGFWMSDLSKDWREDVLVWIPKSSGLFSVSSAWDVLRPTQPLVPWFSSLWFSGNISKHSFIAWLAVRDRLATV
        RLEMVSVVLFGMTLGFWMSDLSKDWREDVLVWIPKSSGLFSVSSAWDVLRPTQPLVPWFSSLWFSGNISKHSFIAWLAVRDRLAT+
Subjt:  RLEMVSVVLFGMTLGFWMSDLSKDWREDVLVWIPKSSGLFSVSSAWDVLRPTQPLVPWFSSLWFSGNISKHSFIAWLAVRDRLATV

A0A6J1DTG0 uncharacterized protein LOC1110241651.0e-4943.18Show/hide
Query:  RSSPSFRFHEKCDGVALTHLCFADDLMIFSRADFGSLSFVNNVLASFGELAGLVANTRKSSFFGTGIPDVEVEQLAAFSDFSVTSFPVRYLGVPLFSCRL
        ++   FRFH KC+ V L HLCF DDLMI S  D GSLSF+ +V  SF +   LV        FG G+P VE ++LAAF  FSV S  VRYLGV L S R+
Subjt:  RSSPSFRFHEKCDGVALTHLCFADDLMIFSRADFGSLSFVNNVLASFGELAGLVANTRKSSFFGTGIPDVEVEQLAAFSDFSVTSFPVRYLGVPLFSCRL

Query:  SHHDCQPLLEQIVSRVWSWSARMFSFASRLQLIQSILQSFQSRESRKVVECASLGFLEFGHYNEAALVALYVGWLYMGWLYVGGLIFFLSEMLFDLWFDL
        SHHDC+PLLE+I+ RV +WSARM SFAS L LI+ + QSFQ                                      +Y   +    + +L D     
Subjt:  SHHDCQPLLEQIVSRVWSWSARMFSFASRLQLIQSILQSFQSRESRKVVECASLGFLEFGHYNEAALVALYVGWLYMGWLYVGGLIFFLSEMLFDLWFDL

Query:  RLEMVSVVLFGMTLGFWMSDLSKDWREDVLVW--IPKSSGLFSVSSAWDVLRPTQPLVPWFSSLWFSGNISKHSFIAWLAVRDRLAT---VSYWSIDLAW
            V  +L      F        W    + W  I  SSGLFSVS+A DVLRP +P VPWFS +WF GNI KHSFIAWLA+RDRLAT   +  W   +  
Subjt:  RLEMVSVVLFGMTLGFWMSDLSKDWREDVLVW--IPKSSGLFSVSSAWDVLRPTQPLVPWFSSLWFSGNISKHSFIAWLAVRDRLAT---VSYWSIDLAW

Query:  ICHINAGQ
         C    GQ
Subjt:  ICHINAGQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.2e-0940.54Show/hide
Query:  GIPDVEVEQLAAFSDFSVTSFPVRYLGVPLFSCRLSHHDCQPLLEQIVSRVWSWSARMFSFASRLQLIQSILQS
        G+ D +   +     F+  + PVRYLG+PL + +++  D  PL+E+I  R+  W+AR  SFA RLQLI S++ S
Subjt:  GIPDVEVEQLAAFSDFSVTSFPVRYLGVPLFSCRLSHHDCQPLLEQIVSRVWSWSARMFSFASRLQLIQSILQS

AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.6e-0432.81Show/hide
Query:  EDVLVWIPKSSG-----LFSVSSAWDVLRPTQPLVPWFSSLWFSGNISKHSFIAWLAVRDRLAT
        ED + W  K +G      F+    W   R  +  V W+  +WFS    K+S +AW+A+++RL T
Subjt:  EDVLVWIPKSSG-----LFSVSSAWDVLRPTQPLVPWFSSLWFSGNISKHSFIAWLAVRDRLAT

AT5G18880.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein9.6e-0527.06Show/hide
Query:  WREDVLVWIPKSSGLFSVSSAWDVLRPTQPLVPWFSSLWFSGNISKHSFIAWLAVRDRLAT---VSYWSIDL--AWICHINAGQS
        WR     ++P     FS    W+ +R   P VPW   +WF   I + S I W++  +RL T   +  W +++  +W+   N  ++
Subjt:  WREDVLVWIPKSSGLFSVSSAWDVLRPTQPLVPWFSSLWFSGNISKHSFIAWLAVRDRLAT---VSYWSIDL--AWICHINAGQS

AT5G28615.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.3e-0642.86Show/hide
Query:  SGLFSVSSAWDVLRPTQPLVPWFSSLWFSGNISKHSFIAWLAVRDRLAT
        S +FS +  W  L      VPW  S+WF GN  KH+FI+W+   +RL T
Subjt:  SGLFSVSSAWDVLRPTQPLVPWFSSLWFSGNISKHSFIAWLAVRDRLAT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCATGGCGGTGTTGTCTCGAATGTTGAATAGGTTGCCGCCGAGTTTCCGGTTTCATGAGAAGTGTGATGGGGTTGCTCTGACGCATTTATGTTTTGCAGAT
GACCTGATGATCTTCTCTCGTGCGGATTTTGGTGTGGGCATGCTTGTCCAGGGTGGAATTTGGCCGAGCGGCTTTGGAACTAGGTCGTCGCCGAGTTTCCGGTTT
CATGAGAAGTGTGATGGGGTTGCTCTGACGCATTTATGTTTTGCAGATGACCTGATGATCTTCTCTCGTGCGGATTTTGGTTCTTTATCCTTTGTTAATAATGTT
TTGGCCTCTTTTGGAGAGTTGGCAGGACTTGTGGCGAATACTCGGAAGAGCTCGTTTTTTGGAACGGGTATTCCTGATGTTGAGGTGGAGCAGTTGGCGGCTTTC
TCTGATTTTTCGGTCACTTCGTTTCCTGTACGTTATCTCGGGGTTCCGCTCTTTTCATGTCGGCTCTCTCATCATGATTGTCAGCCTTTGCTTGAGCAGATTGTG
TCTCGTGTTTGGAGTTGGTCGGCTAGGATGTTTTCTTTCGCTAGCCGGTTGCAGCTTATTCAGTCGATTTTGCAGAGTTTTCAGAGCCGTGAGAGCAGGAAGGTG
GTTGAGTGTGCGTCACTTGGGTTCTTGGAATTCGGCCACTATAATGAAGCTGCTTTGGTTGCTCTTTATGTGGGCTGGCTCTATATGGGCTGGCTCTATGTGGGT
GGCTTGATATTCTTTCTGTCCGAGATGCTTTTTGACCTTTGGTTCGATTTGCGATTGGAGATGGTCAGCGTTGTTTTGTTTGGCATGACGCTTGGCTTCTGGATG
TCCGATTTATCCAAGGATTGGAGAGAAGATGTGCTCGTTTGGATTCCGAAGTCGTCGGGTCTTTTCTCGGTGTCGAGCGCATGGGATGTGTTGCGGCCGACTCAA
CCTCTTGTTCCTTGGTTTTCCTCGCTTTGGTTCAGTGGGAACATTTCGAAGCATTCTTTCATTGCTTGGTTGGCGGTGCGTGATCGGCTTGCTACGGTTTCATAT
TGGTCTATTGATCTTGCTTGGATCTGTCACATTAATGCTGGACAGTCTGTTCGTCGTCGTGTGTGGTGTTTGGCATGGACTTCAACTGTTTCCTTTAATTGGAGG
GAGCGTAATGCTAGAGTTCATGGGGGTGGGGTGGGCCGGTCGCCTTCTGCCCTATTGTGCACTTTGAAAGCTGAGATTCAGGAGCTCTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCATGGCGGTGTTGTCTCGAATGTTGAATAGGTTGCCGCCGAGTTTCCGGTTTCATGAGAAGTGTGATGGGGTTGCTCTGACGCATTTATGTTTTGCAGAT
GACCTGATGATCTTCTCTCGTGCGGATTTTGGTGTGGGCATGCTTGTCCAGGGTGGAATTTGGCCGAGCGGCTTTGGAACTAGGTCGTCGCCGAGTTTCCGGTTT
CATGAGAAGTGTGATGGGGTTGCTCTGACGCATTTATGTTTTGCAGATGACCTGATGATCTTCTCTCGTGCGGATTTTGGTTCTTTATCCTTTGTTAATAATGTT
TTGGCCTCTTTTGGAGAGTTGGCAGGACTTGTGGCGAATACTCGGAAGAGCTCGTTTTTTGGAACGGGTATTCCTGATGTTGAGGTGGAGCAGTTGGCGGCTTTC
TCTGATTTTTCGGTCACTTCGTTTCCTGTACGTTATCTCGGGGTTCCGCTCTTTTCATGTCGGCTCTCTCATCATGATTGTCAGCCTTTGCTTGAGCAGATTGTG
TCTCGTGTTTGGAGTTGGTCGGCTAGGATGTTTTCTTTCGCTAGCCGGTTGCAGCTTATTCAGTCGATTTTGCAGAGTTTTCAGAGCCGTGAGAGCAGGAAGGTG
GTTGAGTGTGCGTCACTTGGGTTCTTGGAATTCGGCCACTATAATGAAGCTGCTTTGGTTGCTCTTTATGTGGGCTGGCTCTATATGGGCTGGCTCTATGTGGGT
GGCTTGATATTCTTTCTGTCCGAGATGCTTTTTGACCTTTGGTTCGATTTGCGATTGGAGATGGTCAGCGTTGTTTTGTTTGGCATGACGCTTGGCTTCTGGATG
TCCGATTTATCCAAGGATTGGAGAGAAGATGTGCTCGTTTGGATTCCGAAGTCGTCGGGTCTTTTCTCGGTGTCGAGCGCATGGGATGTGTTGCGGCCGACTCAA
CCTCTTGTTCCTTGGTTTTCCTCGCTTTGGTTCAGTGGGAACATTTCGAAGCATTCTTTCATTGCTTGGTTGGCGGTGCGTGATCGGCTTGCTACGGTTTCATAT
TGGTCTATTGATCTTGCTTGGATCTGTCACATTAATGCTGGACAGTCTGTTCGTCGTCGTGTGTGGTGTTTGGCATGGACTTCAACTGTTTCCTTTAATTGGAGG
GAGCGTAATGCTAGAGTTCATGGGGGTGGGGTGGGCCGGTCGCCTTCTGCCCTATTGTGCACTTTGAAAGCTGAGATTCAGGAGCTCTCGTAA
Protein sequenceShow/hide protein sequence
MVMAVLSRMLNRLPPSFRFHEKCDGVALTHLCFADDLMIFSRADFGVGMLVQGGIWPSGFGTRSSPSFRFHEKCDGVALTHLCFADDLMIFSRADFGSLSFVNNV
LASFGELAGLVANTRKSSFFGTGIPDVEVEQLAAFSDFSVTSFPVRYLGVPLFSCRLSHHDCQPLLEQIVSRVWSWSARMFSFASRLQLIQSILQSFQSRESRKV
VECASLGFLEFGHYNEAALVALYVGWLYMGWLYVGGLIFFLSEMLFDLWFDLRLEMVSVVLFGMTLGFWMSDLSKDWREDVLVWIPKSSGLFSVSSAWDVLRPTQ
PLVPWFSSLWFSGNISKHSFIAWLAVRDRLATVSYWSIDLAWICHINAGQSVRRRVWCLAWTSTVSFNWRERNARVHGGGVGRSPSALLCTLKAEIQELS