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Moc01g01150 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g01150
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr1:851349..853268
RNA-Seq ExpressionMoc01g01150
SyntenyMoc01g01150
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057648.1 putative polyprotein [Cucumis melo var. makuwa]3.7e-1165.15Show/hide
Query:  MYHHAIKIEDQLRKEKEHSKRNESMQPKEKFGATKRVVPESSNN---EASKEVKEKVNSVQCWKCK
        MYH+AIKIE QL++EKE SKRNESMQ + KF   ++V  ESSN    EASKEV+EK +S+QCWKCK
Subjt:  MYHHAIKIEDQLRKEKEHSKRNESMQPKEKFGATKRVVPESSNN---EASKEVKEKVNSVQCWKCK

KAA0066461.1 uncharacterized protein E6C27_scaffold21G005620 [Cucumis melo var. makuwa]3.4e-1266.67Show/hide
Query:  MYHHAIKIEDQLRKEKEHSKRNESMQPKEKFGATKRVVPESSNN---EASKEVKEKVNSVQCWKCK
        MYH+AIKIE QL++EKEHSKRNESMQ + KF A ++V  ESSN    E+SKEV+EK +S+QCWKCK
Subjt:  MYHHAIKIEDQLRKEKEHSKRNESMQPKEKFGATKRVVPESSNN---EASKEVKEKVNSVQCWKCK

XP_022153198.1 uncharacterized protein LOC111020753 [Momordica charantia]1.4e-1052.27Show/hide
Query:  MYHHAIKIEDQLRKEKEHSK----------------------RNESMQPKEKFGATKRVVPESSN---NEASKEVKEKVNSVQCWKCK
        MYH+ +KIEDQL++EKE+SK                      RNES+QPKEKF A KR+  ESSN   NEA KEV+EK +S+QCWKCK
Subjt:  MYHHAIKIEDQLRKEKEHSK----------------------RNESMQPKEKFGATKRVVPESSN---NEASKEVKEKVNSVQCWKCK

XP_023520950.1 uncharacterized protein LOC111784506, partial [Cucurbita pepo subsp. pepo]3.7e-1155.68Show/hide
Query:  MYHHAIKIEDQLRKEKEHSK----------------------RNESMQPKEKFGATKRVVPESS---NNEASKEVKEKVNSVQCWKCK
        MYH+A+KIEDQL++EKEHSK                      RNESM PKEKF A KRV  ESS    NEASK VKEK +S+QCWKCK
Subjt:  MYHHAIKIEDQLRKEKEHSK----------------------RNESMQPKEKFGATKRVVPESS---NNEASKEVKEKVNSVQCWKCK

XP_023544048.1 uncharacterized protein LOC111803745 [Cucurbita pepo subsp. pepo]3.7e-1155.68Show/hide
Query:  MYHHAIKIEDQLRKEKEHSK----------------------RNESMQPKEKFGATKRVVPESS---NNEASKEVKEKVNSVQCWKCK
        MYH+A+KIEDQL++EKEHSK                      RNESM PKEKF A KRV  ESS    NEASK VKEK +S+QCWKCK
Subjt:  MYHHAIKIEDQLRKEKEHSK----------------------RNESMQPKEKFGATKRVVPESS---NNEASKEVKEKVNSVQCWKCK

TrEMBL top hitse value%identityAlignment
A0A5A7UR86 Putative polyprotein1.8e-1165.15Show/hide
Query:  MYHHAIKIEDQLRKEKEHSKRNESMQPKEKFGATKRVVPESSNN---EASKEVKEKVNSVQCWKCK
        MYH+AIKIE QL++EKE SKRNESMQ + KF   ++V  ESSN    EASKEV+EK +S+QCWKCK
Subjt:  MYHHAIKIEDQLRKEKEHSKRNESMQPKEKFGATKRVVPESSNN---EASKEVKEKVNSVQCWKCK

A0A5A7VLF9 CCHC-type domain-containing protein1.6e-1266.67Show/hide
Query:  MYHHAIKIEDQLRKEKEHSKRNESMQPKEKFGATKRVVPESSNN---EASKEVKEKVNSVQCWKCK
        MYH+AIKIE QL++EKEHSKRNESMQ + KF A ++V  ESSN    E+SKEV+EK +S+QCWKCK
Subjt:  MYHHAIKIEDQLRKEKEHSKRNESMQPKEKFGATKRVVPESSNN---EASKEVKEKVNSVQCWKCK

A0A6J1DGU9 uncharacterized protein LOC1110207536.9e-1152.27Show/hide
Query:  MYHHAIKIEDQLRKEKEHSK----------------------RNESMQPKEKFGATKRVVPESSN---NEASKEVKEKVNSVQCWKCK
        MYH+ +KIEDQL++EKE+SK                      RNES+QPKEKF A KR+  ESSN   NEA KEV+EK +S+QCWKCK
Subjt:  MYHHAIKIEDQLRKEKEHSK----------------------RNESMQPKEKFGATKRVVPESSN---NEASKEVKEKVNSVQCWKCK

A0A6J1DX75 uncharacterized protein LOC1110253031.3e-0951.14Show/hide
Query:  MYHHAIKIEDQLRKEKEHSK----------------------RNESMQPKEKFGATKRVVPESSN---NEASKEVKEKVNSVQCWKCK
        MYH+A+KIEDQ ++EKE+SK                      RNESMQPK KF A KR+  ESSN   NEA KEV+E  +S+QCWKCK
Subjt:  MYHHAIKIEDQLRKEKEHSK----------------------RNESMQPKEKFGATKRVVPESSN---NEASKEVKEKVNSVQCWKCK

A0A6J1EVI6 LOW QUALITY PROTEIN: uncharacterized protein LOC1114384591.2e-1054.55Show/hide
Query:  MYHHAIKIEDQLRKEKEHSK----------------------RNESMQPKEKFGATKRVVPESSN---NEASKEVKEKVNSVQCWKCK
        M H+A+KIEDQL++EKEHSK                      RNESM PKEKF A KRV  ESSN   NEASK V+EK +S+QCWKCK
Subjt:  MYHHAIKIEDQLRKEKEHSK----------------------RNESMQPKEKFGATKRVVPESSN---NEASKEVKEKVNSVQCWKCK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATCACCATGCTATCAAAATTGAAGATCAATTGAGGAAAGAAAAGGAACATTCCAAAAGGAATGAATCCATGCAACCAAAAGAGAAGTTTGGTGCTACCAAAAGAGT
TGTGCCCGAGAGTTCAAATAATGAAGCTTCAAAGGAGGTAAAGGAGAAGGTTAATTCTGTTCAATGTTGGAAGTGCAAAGTGAAATTCCAACTCTTCAAATCTAAGGGTG
GTCGAATACAAGTAACAATGGAAGTTATGGTGGAGCCAACAAGAGTTATCCTACCATCTTCTCATGATCTTGAGATTGTCTTCAAGGTAATCATGGACAAAAGAAACCTT
AGGTTTGATGTTAAATCGATTCATTGGATTAGTCTTGATCAAGCTAATTATGGAGTAGTCGTCTTAGGATCTAGGAGTGACCATCATAGATACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTATCACCATGCTATCAAAATTGAAGATCAATTGAGGAAAGAAAAGGAACATTCCAAAAGGAATGAATCCATGCAACCAAAAGAGAAGTTTGGTGCTACCAAAAGAGT
TGTGCCCGAGAGTTCAAATAATGAAGCTTCAAAGGAGGTAAAGGAGAAGGTTAATTCTGTTCAATGTTGGAAGTGCAAAGTGAAATTCCAACTCTTCAAATCTAAGGGTG
GTCGAATACAAGTAACAATGGAAGTTATGGTGGAGCCAACAAGAGTTATCCTACCATCTTCTCATGATCTTGAGATTGTCTTCAAGGTAATCATGGACAAAAGAAACCTT
AGGTTTGATGTTAAATCGATTCATTGGATTAGTCTTGATCAAGCTAATTATGGAGTAGTCGTCTTAGGATCTAGGAGTGACCATCATAGATACTAA
Protein sequenceShow/hide protein sequence
MYHHAIKIEDQLRKEKEHSKRNESMQPKEKFGATKRVVPESSNNEASKEVKEKVNSVQCWKCKVKFQLFKSKGGRIQVTMEVMVEPTRVILPSSHDLEIVFKVIMDKRNL
RFDVKSIHWISLDQANYGVVVLGSRSDHHRY