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Moc01g01360 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g01360
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr1:967830..971647
RNA-Seq ExpressionMoc01g01360
SyntenyMoc01g01360
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150861.1 uncharacterized protein LOC111018906 [Momordica charantia]9.0e-3948.33Show/hide
Query:  VTFSDKDLEDIHVPHNNALVIVAQIDHVKVRRILVDWGASVNILSFSTYETLGWERGQLKPSPTSL--------------------------VTKMAEFI
        ++F D DLE +H+PHN+ALVI   IDHV VRR+LVD GAS NILS +TY  LGW R QLK SPT L                          VT+MAEF+
Subjt:  VTFSDKDLEDIHVPHNNALVIVAQIDHVKVRRILVDWGASVNILSFSTYETLGWERGQLKPSPTSL--------------------------VTKMAEFI

Query:  VVEATSAYNKIFGRPVIHDLQVVPLTLHQSLKYHTSKGIGTVRGEQKTFSECYAVVLKPTCT-AISR--------GPELKELKAMDEPNQGEPAEDLKLI
        V+   SAYN IFGRP+IH  + V  TLHQ LKY T  G+GTVRGEQKT  ECYA  LK +   A+           PE   LK+  +     P E L+L+
Subjt:  VVEATSAYNKIFGRPVIHDLQVVPLTLHQSLKYHTSKGIGTVRGEQKTFSECYAVVLKPTCT-AISR--------GPELKELKAMDEPNQGEPAEDLKLI

Query:  PLLSSKKCV
        PLLS K+ V
Subjt:  PLLSSKKCV

XP_022152110.1 uncharacterized protein LOC111019899 [Momordica charantia]8.1e-4048.29Show/hide
Query:  VTFSDKDLEDIHVPHNNALVIVAQIDHVKVRRILVDWGASVNILSFSTYETLGWERGQLKPSPTSL--------------------------VTKMAEFI
        +TF   DL ++H+PHN+ALVI   IDHV VRR+LVD GAS NILS  TY  LGW R QLK SPT L                          VT+MAEF+
Subjt:  VTFSDKDLEDIHVPHNNALVIVAQIDHVKVRRILVDWGASVNILSFSTYETLGWERGQLKPSPTSL--------------------------VTKMAEFI

Query:  VVEATSAYNKIFGRPVIHDLQVVPLTLHQSLKYHTSKGIGTVRGEQKTFSECYAVVLKPTC-----TAISRGPELKELKAMDEPNQGEPAEDLKLIPLLS
        VV+  SAYN IFGRP+IH  + +P TLHQ LKY T  G+GTVRGEQ    ECYA  LK T      T  SR   L+    +       P E+L+L+PLLS
Subjt:  VVEATSAYNKIFGRPVIHDLQVVPLTLHQSLKYHTSKGIGTVRGEQKTFSECYAVVLKPTC-----TAISRGPELKELKAMDEPNQGEPAEDLKLIPLLS

Query:  SKKCV
         +K V
Subjt:  SKKCV

XP_022152367.1 uncharacterized protein LOC111020111 [Momordica charantia]2.0e-3848.76Show/hide
Query:  VTFSDKDLEDIHVPHNNALVIVAQIDHVKVRRILVDWGASVNILSFSTYETLGWERGQLKPSPTSL--------------------------VTKMAEFI
        V  +D DLE +H+PHN+ALVI   ID V VRR+LVD GAS NILS  TY  LGW R QLK SPT L                          VT+MAEF+
Subjt:  VTFSDKDLEDIHVPHNNALVIVAQIDHVKVRRILVDWGASVNILSFSTYETLGWERGQLKPSPTSL--------------------------VTKMAEFI

Query:  VVEATSAYNKIFGRPVIHDLQVVPLTLHQSLKYHTSKGIGTVRGEQKTFSECYAVVLKPTCTAISRGPELKELKAMDEP-----NQGEP-AEDLKLIPLL
        V++   AYN IFGRP+IH  + VP TLHQ LKY T  G+GTVRGEQKT  ECYA  LK +   +     L+E    D+P      Q  P  E+L+L+PLL
Subjt:  VVEATSAYNKIFGRPVIHDLQVVPLTLHQSLKYHTSKGIGTVRGEQKTFSECYAVVLKPTCTAISRGPELKELKAMDEP-----NQGEP-AEDLKLIPLL

Query:  S
        S
Subjt:  S

XP_022154846.1 uncharacterized protein LOC111022006 [Momordica charantia]3.1e-3947.37Show/hide
Query:  VTFSDKDLEDIHVPHNNALVIVAQIDHVKVRRILVDWGASVNILSFSTYETLGWERGQLKPSPTSL--------------------------VTKMAEFI
        +TF D DLE +H+PHN+ALVI   IDH+ VRR+L+D GAS NI S  TY  LGW R QLK SPT L                          VT+MAEF+
Subjt:  VTFSDKDLEDIHVPHNNALVIVAQIDHVKVRRILVDWGASVNILSFSTYETLGWERGQLKPSPTSL--------------------------VTKMAEFI

Query:  VVEATSAYNKIFGRPVIHDLQVVPLTLHQSLKYHTSKGIGTVRGEQKTFSECYAVVLK--PTCT---AISRGP---ELKELKAMDEPNQGEPAEDLKLIP
        V++  SAYN IFGRP+IH    V  TLHQ LKY TS G+GTVRGEQKT  +CYA  LK    CT     +RG       +L    +     P E+L+L+P
Subjt:  VVEATSAYNKIFGRPVIHDLQVVPLTLHQSLKYHTSKGIGTVRGEQKTFSECYAVVLK--PTCT---AISRGP---ELKELKAMDEPNQGEPAEDLKLIP

Query:  LLSSKKCVH
        LLS +K V+
Subjt:  LLSSKKCVH

XP_022157676.1 uncharacterized protein LOC111024332 [Momordica charantia]3.1e-3948.51Show/hide
Query:  VTFSDKDLEDIHVPHNNALVIVAQIDHVKVRRILVDWGASVNILSFSTYETLGWERGQLKPSPTSL--------------------------VTKMAEFI
        +TF   DLE++H+PHN+ALVI   IDHV VRR+LVD GAS NILS  TY  LGW R QLK SPT L                          VT+M EF+
Subjt:  VTFSDKDLEDIHVPHNNALVIVAQIDHVKVRRILVDWGASVNILSFSTYETLGWERGQLKPSPTSL--------------------------VTKMAEFI

Query:  VVEATSAYNKIFGRPVIHDLQVVPLTLHQSLKYHTSKGIGTVRGEQKTFSECYAVVLK--PTCTAISRGPELKELKAMDEPNQ--GEPAEDLKLIPLLSS
        VV+  S YN IFGRP+IH  + +P TLHQ LKY T  G+GTVRGEQ    ECYA  LK    C   +      EL+A D P +    P E+L+L+PLLS 
Subjt:  VVEATSAYNKIFGRPVIHDLQVVPLTLHQSLKYHTSKGIGTVRGEQKTFSECYAVVLK--PTCTAISRGPELKELKAMDEPNQ--GEPAEDLKLIPLLSS

Query:  KK
        +K
Subjt:  KK

TrEMBL top hitse value%identityAlignment
A0A6J1DCR3 uncharacterized protein LOC1110189064.3e-3948.33Show/hide
Query:  VTFSDKDLEDIHVPHNNALVIVAQIDHVKVRRILVDWGASVNILSFSTYETLGWERGQLKPSPTSL--------------------------VTKMAEFI
        ++F D DLE +H+PHN+ALVI   IDHV VRR+LVD GAS NILS +TY  LGW R QLK SPT L                          VT+MAEF+
Subjt:  VTFSDKDLEDIHVPHNNALVIVAQIDHVKVRRILVDWGASVNILSFSTYETLGWERGQLKPSPTSL--------------------------VTKMAEFI

Query:  VVEATSAYNKIFGRPVIHDLQVVPLTLHQSLKYHTSKGIGTVRGEQKTFSECYAVVLKPTCT-AISR--------GPELKELKAMDEPNQGEPAEDLKLI
        V+   SAYN IFGRP+IH  + V  TLHQ LKY T  G+GTVRGEQKT  ECYA  LK +   A+           PE   LK+  +     P E L+L+
Subjt:  VVEATSAYNKIFGRPVIHDLQVVPLTLHQSLKYHTSKGIGTVRGEQKTFSECYAVVLKPTCT-AISR--------GPELKELKAMDEPNQGEPAEDLKLI

Query:  PLLSSKKCV
        PLLS K+ V
Subjt:  PLLSSKKCV

A0A6J1DD03 uncharacterized protein LOC1110198993.9e-4048.29Show/hide
Query:  VTFSDKDLEDIHVPHNNALVIVAQIDHVKVRRILVDWGASVNILSFSTYETLGWERGQLKPSPTSL--------------------------VTKMAEFI
        +TF   DL ++H+PHN+ALVI   IDHV VRR+LVD GAS NILS  TY  LGW R QLK SPT L                          VT+MAEF+
Subjt:  VTFSDKDLEDIHVPHNNALVIVAQIDHVKVRRILVDWGASVNILSFSTYETLGWERGQLKPSPTSL--------------------------VTKMAEFI

Query:  VVEATSAYNKIFGRPVIHDLQVVPLTLHQSLKYHTSKGIGTVRGEQKTFSECYAVVLKPTC-----TAISRGPELKELKAMDEPNQGEPAEDLKLIPLLS
        VV+  SAYN IFGRP+IH  + +P TLHQ LKY T  G+GTVRGEQ    ECYA  LK T      T  SR   L+    +       P E+L+L+PLLS
Subjt:  VVEATSAYNKIFGRPVIHDLQVVPLTLHQSLKYHTSKGIGTVRGEQKTFSECYAVVLKPTC-----TAISRGPELKELKAMDEPNQGEPAEDLKLIPLLS

Query:  SKKCV
         +K V
Subjt:  SKKCV

A0A6J1DG07 uncharacterized protein LOC1110201119.7e-3948.76Show/hide
Query:  VTFSDKDLEDIHVPHNNALVIVAQIDHVKVRRILVDWGASVNILSFSTYETLGWERGQLKPSPTSL--------------------------VTKMAEFI
        V  +D DLE +H+PHN+ALVI   ID V VRR+LVD GAS NILS  TY  LGW R QLK SPT L                          VT+MAEF+
Subjt:  VTFSDKDLEDIHVPHNNALVIVAQIDHVKVRRILVDWGASVNILSFSTYETLGWERGQLKPSPTSL--------------------------VTKMAEFI

Query:  VVEATSAYNKIFGRPVIHDLQVVPLTLHQSLKYHTSKGIGTVRGEQKTFSECYAVVLKPTCTAISRGPELKELKAMDEP-----NQGEP-AEDLKLIPLL
        V++   AYN IFGRP+IH  + VP TLHQ LKY T  G+GTVRGEQKT  ECYA  LK +   +     L+E    D+P      Q  P  E+L+L+PLL
Subjt:  VVEATSAYNKIFGRPVIHDLQVVPLTLHQSLKYHTSKGIGTVRGEQKTFSECYAVVLKPTCTAISRGPELKELKAMDEP-----NQGEP-AEDLKLIPLL

Query:  S
        S
Subjt:  S

A0A6J1DPX9 uncharacterized protein LOC1110220061.5e-3947.37Show/hide
Query:  VTFSDKDLEDIHVPHNNALVIVAQIDHVKVRRILVDWGASVNILSFSTYETLGWERGQLKPSPTSL--------------------------VTKMAEFI
        +TF D DLE +H+PHN+ALVI   IDH+ VRR+L+D GAS NI S  TY  LGW R QLK SPT L                          VT+MAEF+
Subjt:  VTFSDKDLEDIHVPHNNALVIVAQIDHVKVRRILVDWGASVNILSFSTYETLGWERGQLKPSPTSL--------------------------VTKMAEFI

Query:  VVEATSAYNKIFGRPVIHDLQVVPLTLHQSLKYHTSKGIGTVRGEQKTFSECYAVVLK--PTCT---AISRGP---ELKELKAMDEPNQGEPAEDLKLIP
        V++  SAYN IFGRP+IH    V  TLHQ LKY TS G+GTVRGEQKT  +CYA  LK    CT     +RG       +L    +     P E+L+L+P
Subjt:  VVEATSAYNKIFGRPVIHDLQVVPLTLHQSLKYHTSKGIGTVRGEQKTFSECYAVVLK--PTCT---AISRGP---ELKELKAMDEPNQGEPAEDLKLIP

Query:  LLSSKKCVH
        LLS +K V+
Subjt:  LLSSKKCVH

A0A6J1DYW5 uncharacterized protein LOC1110243321.5e-3948.51Show/hide
Query:  VTFSDKDLEDIHVPHNNALVIVAQIDHVKVRRILVDWGASVNILSFSTYETLGWERGQLKPSPTSL--------------------------VTKMAEFI
        +TF   DLE++H+PHN+ALVI   IDHV VRR+LVD GAS NILS  TY  LGW R QLK SPT L                          VT+M EF+
Subjt:  VTFSDKDLEDIHVPHNNALVIVAQIDHVKVRRILVDWGASVNILSFSTYETLGWERGQLKPSPTSL--------------------------VTKMAEFI

Query:  VVEATSAYNKIFGRPVIHDLQVVPLTLHQSLKYHTSKGIGTVRGEQKTFSECYAVVLK--PTCTAISRGPELKELKAMDEPNQ--GEPAEDLKLIPLLSS
        VV+  S YN IFGRP+IH  + +P TLHQ LKY T  G+GTVRGEQ    ECYA  LK    C   +      EL+A D P +    P E+L+L+PLLS 
Subjt:  VVEATSAYNKIFGRPVIHDLQVVPLTLHQSLKYHTSKGIGTVRGEQKTFSECYAVVLK--PTCTAISRGPELKELKAMDEPNQ--GEPAEDLKLIPLLSS

Query:  KK
        +K
Subjt:  KK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCAGCCGCGGAAAAGAGCTGCACCGGTTCGTTGCCGACGCCGGGGGAAACCCGTCGCCGCTGCTGCAAGTTGCCGGAATCGCGCCGCCTGCTACTACTGCTTCAGA
TTCGGTCGCCGGCCGCCGCGCGTGGTTCTTCGTCCGCCGCTACTACGAGTCGTCGTCCCGGTCGAACGCGACCTCCCTACGGAAGGTGTTTGCATGGTTCAATATCGAGG
TGAATGGAGATAGTATTCATATCGTCCCCTACCAAGTCACTTTCTCGGACAAAGACCTCGAAGACATACATGTCCCTCACAACAACGCCCTGGTCATTGTAGCCCAGATC
GACCACGTTAAAGTTAGACGGATACTGGTCGACTGGGGCGCTTCAGTAAATATACTATCGTTTTCTACTTATGAGACCTTAGGCTGGGAGCGAGGCCAGTTGAAGCCTAG
CCCCACCTCACTGGTCACAAAGATGGCAGAATTCATCGTGGTCGAGGCCACGTCAGCGTACAACAAGATATTTGGCCGACCTGTTATCCACGATCTACAGGTTGTACCTT
TGACGCTACACCAATCGTTGAAATACCATACCTCTAAAGGGATTGGGACAGTGCGAGGAGAGCAAAAGACCTTCAGCGAGTGTTATGCAGTAGTACTCAAACCAACTTGC
ACTGCAATTTCTAGAGGACCCGAGCTCAAAGAGCTTAAAGCAATGGATGAGCCAAATCAGGGGGAGCCCGCAGAAGACCTGAAGCTCATCCCATTGCTAAGCTCAAAGAA
GTGCGTGCACGAGCTATTAGCTCAGTTCAAGGAGTATACCATGGAGTGGGTACCCCGATCCGATAACACTAACACTGACGCACTAGCAAAGTTGGTGTCCTCCTATCATG
TCGAGCTCCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCAGCCGCGGAAAAGAGCTGCACCGGTTCGTTGCCGACGCCGGGGGAAACCCGTCGCCGCTGCTGCAAGTTGCCGGAATCGCGCCGCCTGCTACTACTGCTTCAGA
TTCGGTCGCCGGCCGCCGCGCGTGGTTCTTCGTCCGCCGCTACTACGAGTCGTCGTCCCGGTCGAACGCGACCTCCCTACGGAAGGTGTTTGCATGGTTCAATATCGAGG
TGAATGGAGATAGTATTCATATCGTCCCCTACCAAGTCACTTTCTCGGACAAAGACCTCGAAGACATACATGTCCCTCACAACAACGCCCTGGTCATTGTAGCCCAGATC
GACCACGTTAAAGTTAGACGGATACTGGTCGACTGGGGCGCTTCAGTAAATATACTATCGTTTTCTACTTATGAGACCTTAGGCTGGGAGCGAGGCCAGTTGAAGCCTAG
CCCCACCTCACTGGTCACAAAGATGGCAGAATTCATCGTGGTCGAGGCCACGTCAGCGTACAACAAGATATTTGGCCGACCTGTTATCCACGATCTACAGGTTGTACCTT
TGACGCTACACCAATCGTTGAAATACCATACCTCTAAAGGGATTGGGACAGTGCGAGGAGAGCAAAAGACCTTCAGCGAGTGTTATGCAGTAGTACTCAAACCAACTTGC
ACTGCAATTTCTAGAGGACCCGAGCTCAAAGAGCTTAAAGCAATGGATGAGCCAAATCAGGGGGAGCCCGCAGAAGACCTGAAGCTCATCCCATTGCTAAGCTCAAAGAA
GTGCGTGCACGAGCTATTAGCTCAGTTCAAGGAGTATACCATGGAGTGGGTACCCCGATCCGATAACACTAACACTGACGCACTAGCAAAGTTGGTGTCCTCCTATCATG
TCGAGCTCCCCTGA
Protein sequenceShow/hide protein sequence
MCSRGKELHRFVADAGGNPSPLLQVAGIAPPATTASDSVAGRRAWFFVRRYYESSSRSNATSLRKVFAWFNIEVNGDSIHIVPYQVTFSDKDLEDIHVPHNNALVIVAQI
DHVKVRRILVDWGASVNILSFSTYETLGWERGQLKPSPTSLVTKMAEFIVVEATSAYNKIFGRPVIHDLQVVPLTLHQSLKYHTSKGIGTVRGEQKTFSECYAVVLKPTC
TAISRGPELKELKAMDEPNQGEPAEDLKLIPLLSSKKCVHELLAQFKEYTMEWVPRSDNTNTDALAKLVSSYHVELP