; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc01g01410 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g01410
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr1:981656..982030
RNA-Seq ExpressionMoc01g01410
SyntenyMoc01g01410
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156989.1 uncharacterized protein LOC111023818 [Momordica charantia]2.0e-0842.71Show/hide
Query:  MKFPTKLQECSMLKILDEALMEELEAEAMLKHREVVDSGSDVDDIEE--DPEVIYLKKEPPVLELKALPQHLKYAYLGSSETLSIIIAADLPMEKE
        +K+P  ++ECS L+I D+ + +E++ E +L   E   +    D ++    P V+    + P LELK LP HLKYAYLG  ETL + IAADL  EKE
Subjt:  MKFPTKLQECSMLKILDEALMEELEAEAMLKHREVVDSGSDVDDIEE--DPEVIYLKKEPPVLELKALPQHLKYAYLGSSETLSIIIAADLPMEKE

XP_022158578.1 uncharacterized protein LOC111025032 [Momordica charantia]3.4e-0844.07Show/hide
Query:  ECSMLKILDEALMEELEAEAML-KHREVVDSGSD-VDDIEEDPEVIYLK------------------------------KEPPVLELKALPQHLKYAYLG
        E  +L++LDEA+ME L AE ML +H   VD+  D VD+I +  E++YL                                EPP LELKALPQHLKYAYL 
Subjt:  ECSMLKILDEALMEELEAEAML-KHREVVDSGSD-VDDIEEDPEVIYLK------------------------------KEPPVLELKALPQHLKYAYLG

Query:  SSETLSIIIAADLPMEKE
        +S  L IIIAA+L  EKE
Subjt:  SSETLSIIIAADLPMEKE

XP_030479560.1 uncharacterized protein LOC115696816 [Cannabis sativa]2.2e-0735.2Show/hide
Query:  MKFPTKLQECSMLKILDEALMEELEAEAMLKHREVVDSGSDVDDIEEDPEV--------------------IYLK-----------KEPPVLELKALPQH
        M+FP ++ +CS L ++D  + E    E + K   V++S  D++ + ED E+                    + LK           +EPP LELK LP H
Subjt:  MKFPTKLQECSMLKILDEALMEELEAEAMLKHREVVDSGSDVDDIEEDPEV--------------------IYLK-----------KEPPVLELKALPQH

Query:  LKYAYLGSSETLSIIIAADLPMEKE
        LKYAYLG +ETL +II+A L  E E
Subjt:  LKYAYLGSSETLSIIIAADLPMEKE

XP_030502183.1 uncharacterized protein LOC115717351 [Cannabis sativa]4.4e-0834.4Show/hide
Query:  MKFPTKLQECSMLKILDEALMEELEAEAMLKHREVVDSGSDVDDIEEDP--------------------EVIYLK-----------KEPPVLELKALPQH
        M+FP +++ECS + ++D  + E+   EA  K  + + S  +++D+ ED                     E + LK           +EPP LELK LP H
Subjt:  MKFPTKLQECSMLKILDEALMEELEAEAMLKHREVVDSGSDVDDIEEDP--------------------EVIYLK-----------KEPPVLELKALPQH

Query:  LKYAYLGSSETLSIIIAADLPMEKE
        LKYAYLG ++TL +IIA++L +E E
Subjt:  LKYAYLGSSETLSIIIAADLPMEKE

XP_030505517.1 uncharacterized protein LOC115720508 [Cannabis sativa]2.2e-0734.4Show/hide
Query:  MKFPTKLQECSMLKILDEALMEELEAEAMLKHREVVDSGSDVDDIEEDP--------------------EVIYLK-----------KEPPVLELKALPQH
        M+F  +++ECS + ++D  ++E    EA  K  + + S  +++D+ ED                     E + LK           +EPP LELK LP H
Subjt:  MKFPTKLQECSMLKILDEALMEELEAEAMLKHREVVDSGSDVDDIEEDP--------------------EVIYLK-----------KEPPVLELKALPQH

Query:  LKYAYLGSSETLSIIIAADLPMEKE
        LKYAYLG ++TL +IIAA+L +E E
Subjt:  LKYAYLGSSETLSIIIAADLPMEKE

TrEMBL top hitse value%identityAlignment
A0A4Y1QWW9 Reverse transcriptase2.0e-0637.25Show/hide
Query:  KFPTKLQECSMLKILDEALMEELEAEAMLKHREVVDSGSDV--------DDIEEDPEVIY-LKKEPPVLELKALPQHLKYAYLGSSETLSIIIAADLPME
        K P + Q+C  + ++D  L  + E E +L++   ++S   V        + + E  + +   +++PP LELK LP+HLKYAYLG++ETL +IIAADL   
Subjt:  KFPTKLQECSMLKILDEALMEELEAEAMLKHREVVDSGSDV--------DDIEEDPEVIY-LKKEPPVLELKALPQHLKYAYLGSSETLSIIIAADLPME

Query:  KE
        +E
Subjt:  KE

A0A5E4GJT7 PREDICTED: LOW QUALITY PROTEIN (Fragment)1.3e-0565Show/hide
Query:  KKEPPVLELKALPQHLKYAYLGSSETLSIIIAADLPMEKE
        +++PP LELK LP+HLKYAYLG++ETL +IIAADL + +E
Subjt:  KKEPPVLELKALPQHLKYAYLGSSETLSIIIAADLPMEKE

A0A6J1CNZ2 uncharacterized protein LOC1110133787.6e-0636.8Show/hide
Query:  MKFPTKLQECSMLKILDEALMEELEAEAML-KHREVVDSGSDVDDIEEDPEVIYLK------------------------------KEPPVLELKALPQH
        MK+P+   E ++L++LDEA+++ L AEAML K    VD+  +  D E   E++Y                                +E P L LKA+P+H
Subjt:  MKFPTKLQECSMLKILDEALMEELEAEAML-KHREVVDSGSDVDDIEEDPEVIYLK------------------------------KEPPVLELKALPQH

Query:  LKYAYLGSSETLSIIIAADLPMEKE
        +KYAYLG+S  L III A L +EKE
Subjt:  LKYAYLGSSETLSIIIAADLPMEKE

A0A6J1DV77 uncharacterized protein LOC1110238189.6e-0942.71Show/hide
Query:  MKFPTKLQECSMLKILDEALMEELEAEAMLKHREVVDSGSDVDDIEE--DPEVIYLKKEPPVLELKALPQHLKYAYLGSSETLSIIIAADLPMEKE
        +K+P  ++ECS L+I D+ + +E++ E +L   E   +    D ++    P V+    + P LELK LP HLKYAYLG  ETL + IAADL  EKE
Subjt:  MKFPTKLQECSMLKILDEALMEELEAEAMLKHREVVDSGSDVDDIEE--DPEVIYLKKEPPVLELKALPQHLKYAYLGSSETLSIIIAADLPMEKE

A0A6J1DWH3 uncharacterized protein LOC1110250321.6e-0844.07Show/hide
Query:  ECSMLKILDEALMEELEAEAML-KHREVVDSGSD-VDDIEEDPEVIYLK------------------------------KEPPVLELKALPQHLKYAYLG
        E  +L++LDEA+ME L AE ML +H   VD+  D VD+I +  E++YL                                EPP LELKALPQHLKYAYL 
Subjt:  ECSMLKILDEALMEELEAEAML-KHREVVDSGSD-VDDIEEDPEVIYLK------------------------------KEPPVLELKALPQHLKYAYLG

Query:  SSETLSIIIAADLPMEKE
        +S  L IIIAA+L  EKE
Subjt:  SSETLSIIIAADLPMEKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTCCCTACTAAATTACAAGAATGTTCAATGCTTAAGATTCTGGATGAGGCATTAATGGAAGAGTTAGAAGCAGAAGCAATGCTAAAGCATCGGGAAGTTGTCGA
CTCTGGAAGTGATGTTGACGATATAGAGGAAGACCCTGAAGTTATCTACCTAAAAAAAGAACCGCCAGTCCTAGAACTTAAGGCATTACCTCAGCACCTGAAGTATGCCT
ACTTGGGTTCATCAGAGACATTGTCGATCATCATTGCAGCGGACCTACCCATGGAAAAGGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAATTCCCTACTAAATTACAAGAATGTTCAATGCTTAAGATTCTGGATGAGGCATTAATGGAAGAGTTAGAAGCAGAAGCAATGCTAAAGCATCGGGAAGTTGTCGA
CTCTGGAAGTGATGTTGACGATATAGAGGAAGACCCTGAAGTTATCTACCTAAAAAAAGAACCGCCAGTCCTAGAACTTAAGGCATTACCTCAGCACCTGAAGTATGCCT
ACTTGGGTTCATCAGAGACATTGTCGATCATCATTGCAGCGGACCTACCCATGGAAAAGGAGTAG
Protein sequenceShow/hide protein sequence
MKFPTKLQECSMLKILDEALMEELEAEAMLKHREVVDSGSDVDDIEEDPEVIYLKKEPPVLELKALPQHLKYAYLGSSETLSIIIAADLPMEKE