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Moc01g01490 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g01490
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr1:1055065..1055709
RNA-Seq ExpressionMoc01g01490
SyntenyMoc01g01490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]4.6e-2137.63Show/hide
Query:  MHAGELLNARENPGNTARSPESKMERQTIRQNSQKRAKADYQPKDRQFPKNIRRYTTTTVPVEHILMEIKDKNLLRWPAKRQQGNFPRDQSCYCLFHKEV
        M AGE   ++    +  +  + K ER   +    +  K D +   +  P+   +YT+TTVP+E +LMEIK++ LL+WP +    +  R +  YCLFH + 
Subjt:  MHAGELLNARENPGNTARSPESKMERQTIRQNSQKRAKADYQPKDRQFPKNIRRYTTTTVPVEHILMEIKDKNLLRWPAKRQQGNFPRDQSCYCLFHKEV

Query:  GHNTAECVRLKEEIETLIQQGYLQEFVDRRGRGNRPHPHDGRPENRHPDPREIRTIFGGPTGGESSRKRKARARHARREPYDHTVY--TSTSRP
        GH T +C  LKEE+E LI +GYL+E+V+       P        ++ P  REIRTI GGP   ES RKRK   R AR     + VY   +T+RP
Subjt:  GHNTAECVRLKEEIETLIQQGYLQEFVDRRGRGNRPHPHDGRPENRHPDPREIRTIFGGPTGGESSRKRKARARHARREPYDHTVY--TSTSRP

XP_022148331.1 uncharacterized protein LOC111017012 [Momordica charantia]2.8e-3459.26Show/hide
Query:  MEIKDKNLLRWPAKRQQGNFPRDQSCYCLFHKEVGHNTAECVRLKEEIETLIQQGYLQEFVDRRGRGNRPHPHDGRPENRHPDP-REIRTIFGGPTGGES
        MEIKDKNL +WP K +  ++P D+  YCLFH+E GHNT+EC+RLKEEIE++IQ GYL+EFVDRR RG  P     +   +  DP REIRTI  GP GGES
Subjt:  MEIKDKNLLRWPAKRQQGNFPRDQSCYCLFHKEVGHNTAECVRLKEEIETLIQQGYLQEFVDRRGRGNRPHPHDGRPENRHPDP-REIRTIFGGPTGGES

Query:  SRKRKARARHARREPYDHTVYTSTSRPSEFTICFN
        SRKRK +AR AR   YDHT+YT+T+     T+CFN
Subjt:  SRKRKARARHARREPYDHTVYTSTSRPSEFTICFN

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.2e-2439.69Show/hide
Query:  MHAGELLNARENPGNTARSPESKMERQTIRQNSQKRAKADYQPKDRQFPKNIRRYTTTTVPVEHILMEIKDKNLLRWPAKRQQGNFPRDQSCYCLFHKEV
        M AGE   ++  P      P  K ER   +    +  K D +   +  P+   +YT TTVP+E +LMEIKD+ LL+WP + +  +  R +  YCLFH++ 
Subjt:  MHAGELLNARENPGNTARSPESKMERQTIRQNSQKRAKADYQPKDRQFPKNIRRYTTTTVPVEHILMEIKDKNLLRWPAKRQQGNFPRDQSCYCLFHKEV

Query:  GHNTAECVRLKEEIETLIQQGYLQEFVDRRGRGNRPHPHDGRPENRHPDPREIRTIFGGPTGGESSRKRKARARHARREPYDHTVY--TSTSRP
        GH T +C  LKEE+E LI++GYL+E+V+       P        ++ P  REIRTI GGP   ES RKRKA  R AR     + VY   +T+RP
Subjt:  GHNTAECVRLKEEIETLIQQGYLQEFVDRRGRGNRPHPHDGRPENRHPDPREIRTIFGGPTGGESSRKRKARARHARREPYDHTVY--TSTSRP

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]1.7e-2344.72Show/hide
Query:  ESKMERQTIRQNSQKRAKADYQPKDRQFPKNIRRYTTTTVPVEHILMEIKDKNLLRWPAKRQQGNFPRDQSCYCLFHKEVGHNTAECVRLKEEIETLIQQ
        + K ER   +  S K  K D     +  P+   +YT TTVP+E +LMEIKD+ LL+WP   +     R +  YCLFH++ GH T +C  LKEE+E LI++
Subjt:  ESKMERQTIRQNSQKRAKADYQPKDRQFPKNIRRYTTTTVPVEHILMEIKDKNLLRWPAKRQQGNFPRDQSCYCLFHKEVGHNTAECVRLKEEIETLIQQ

Query:  GYLQEFV-DRRGRGNRPHPHDGRPENRHPDPREIRTIFGGPTGGESSRKRKARARHARREP
        GYL+E+V D +   NR +      +N+ P  REIRTI GG T  ES RKRKA  R AR  P
Subjt:  GYLQEFV-DRRGRGNRPHPHDGRPENRHPDPREIRTIFGGPTGGESSRKRKARARHARREP

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]3.2e-2237.5Show/hide
Query:  MHAGELLNARENPGNTARSPESKMERQTIRQNSQKRAKADYQPKDRQFPKNIRRYTTTTVPVEHILMEIKDKNLLRWPAKRQQGNFPRDQSCYCLFHKEV
        M AGE   ++  P    +  + K ER   +    +  K D +   +  P+   +YT TTVP+E +LMEIKD+ LL+WP + +  +  R +  YCLFH++ 
Subjt:  MHAGELLNARENPGNTARSPESKMERQTIRQNSQKRAKADYQPKDRQFPKNIRRYTTTTVPVEHILMEIKDKNLLRWPAKRQQGNFPRDQSCYCLFHKEV

Query:  GHNTAECVRLKEEIETLIQQGYLQEFVDRRGRGNRPHPHDGRPENRHPDPREIRTIFGGPTGGESSRKRKARARHARREPYDHTVYTSTSRPSEFTICFN
         H T +   LKEE+E LI++GYLQE+V+       P         + P  REIRTI GGP   ES+RKRKA  R AR     + VY + +     TI F+
Subjt:  GHNTAECVRLKEEIETLIQQGYLQEFVDRRGRGNRPHPHDGRPENRHPDPREIRTIFGGPTGGESSRKRKARARHARREPYDHTVYTSTSRPSEFTICFN

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128052.2e-2137.63Show/hide
Query:  MHAGELLNARENPGNTARSPESKMERQTIRQNSQKRAKADYQPKDRQFPKNIRRYTTTTVPVEHILMEIKDKNLLRWPAKRQQGNFPRDQSCYCLFHKEV
        M AGE   ++    +  +  + K ER   +    +  K D +   +  P+   +YT+TTVP+E +LMEIK++ LL+WP +    +  R +  YCLFH + 
Subjt:  MHAGELLNARENPGNTARSPESKMERQTIRQNSQKRAKADYQPKDRQFPKNIRRYTTTTVPVEHILMEIKDKNLLRWPAKRQQGNFPRDQSCYCLFHKEV

Query:  GHNTAECVRLKEEIETLIQQGYLQEFVDRRGRGNRPHPHDGRPENRHPDPREIRTIFGGPTGGESSRKRKARARHARREPYDHTVY--TSTSRP
        GH T +C  LKEE+E LI +GYL+E+V+       P        ++ P  REIRTI GGP   ES RKRK   R AR     + VY   +T+RP
Subjt:  GHNTAECVRLKEEIETLIQQGYLQEFVDRRGRGNRPHPHDGRPENRHPDPREIRTIFGGPTGGESSRKRKARARHARREPYDHTVY--TSTSRP

A0A6J1D520 uncharacterized protein LOC1110170121.4e-3459.26Show/hide
Query:  MEIKDKNLLRWPAKRQQGNFPRDQSCYCLFHKEVGHNTAECVRLKEEIETLIQQGYLQEFVDRRGRGNRPHPHDGRPENRHPDP-REIRTIFGGPTGGES
        MEIKDKNL +WP K +  ++P D+  YCLFH+E GHNT+EC+RLKEEIE++IQ GYL+EFVDRR RG  P     +   +  DP REIRTI  GP GGES
Subjt:  MEIKDKNLLRWPAKRQQGNFPRDQSCYCLFHKEVGHNTAECVRLKEEIETLIQQGYLQEFVDRRGRGNRPHPHDGRPENRHPDP-REIRTIFGGPTGGES

Query:  SRKRKARARHARREPYDHTVYTSTSRPSEFTICFN
        SRKRK +AR AR   YDHT+YT+T+     T+CFN
Subjt:  SRKRKARARHARREPYDHTVYTSTSRPSEFTICFN

A0A6J1DWY0 uncharacterized protein LOC1110252935.7e-2539.69Show/hide
Query:  MHAGELLNARENPGNTARSPESKMERQTIRQNSQKRAKADYQPKDRQFPKNIRRYTTTTVPVEHILMEIKDKNLLRWPAKRQQGNFPRDQSCYCLFHKEV
        M AGE   ++  P      P  K ER   +    +  K D +   +  P+   +YT TTVP+E +LMEIKD+ LL+WP + +  +  R +  YCLFH++ 
Subjt:  MHAGELLNARENPGNTARSPESKMERQTIRQNSQKRAKADYQPKDRQFPKNIRRYTTTTVPVEHILMEIKDKNLLRWPAKRQQGNFPRDQSCYCLFHKEV

Query:  GHNTAECVRLKEEIETLIQQGYLQEFVDRRGRGNRPHPHDGRPENRHPDPREIRTIFGGPTGGESSRKRKARARHARREPYDHTVY--TSTSRP
        GH T +C  LKEE+E LI++GYL+E+V+       P        ++ P  REIRTI GGP   ES RKRKA  R AR     + VY   +T+RP
Subjt:  GHNTAECVRLKEEIETLIQQGYLQEFVDRRGRGNRPHPHDGRPENRHPDPREIRTIFGGPTGGESSRKRKARARHARREPYDHTVY--TSTSRP

A0A6J1DYL6 uncharacterized protein LOC1110257851.6e-2237.5Show/hide
Query:  MHAGELLNARENPGNTARSPESKMERQTIRQNSQKRAKADYQPKDRQFPKNIRRYTTTTVPVEHILMEIKDKNLLRWPAKRQQGNFPRDQSCYCLFHKEV
        M AGE   ++  P    +  + K ER   +    +  K D +   +  P+   +YT TTVP+E +LMEIKD+ LL+WP + +  +  R +  YCLFH++ 
Subjt:  MHAGELLNARENPGNTARSPESKMERQTIRQNSQKRAKADYQPKDRQFPKNIRRYTTTTVPVEHILMEIKDKNLLRWPAKRQQGNFPRDQSCYCLFHKEV

Query:  GHNTAECVRLKEEIETLIQQGYLQEFVDRRGRGNRPHPHDGRPENRHPDPREIRTIFGGPTGGESSRKRKARARHARREPYDHTVYTSTSRPSEFTICFN
         H T +   LKEE+E LI++GYLQE+V+       P         + P  REIRTI GGP   ES+RKRKA  R AR     + VY + +     TI F+
Subjt:  GHNTAECVRLKEEIETLIQQGYLQEFVDRRGRGNRPHPHDGRPENRHPDPREIRTIFGGPTGGESSRKRKARARHARREPYDHTVYTSTSRPSEFTICFN

A0A6J1DZ52 uncharacterized protein LOC1110256128.3e-2444.72Show/hide
Query:  ESKMERQTIRQNSQKRAKADYQPKDRQFPKNIRRYTTTTVPVEHILMEIKDKNLLRWPAKRQQGNFPRDQSCYCLFHKEVGHNTAECVRLKEEIETLIQQ
        + K ER   +  S K  K D     +  P+   +YT TTVP+E +LMEIKD+ LL+WP   +     R +  YCLFH++ GH T +C  LKEE+E LI++
Subjt:  ESKMERQTIRQNSQKRAKADYQPKDRQFPKNIRRYTTTTVPVEHILMEIKDKNLLRWPAKRQQGNFPRDQSCYCLFHKEVGHNTAECVRLKEEIETLIQQ

Query:  GYLQEFV-DRRGRGNRPHPHDGRPENRHPDPREIRTIFGGPTGGESSRKRKARARHARREP
        GYL+E+V D +   NR +      +N+ P  REIRTI GG T  ES RKRKA  R AR  P
Subjt:  GYLQEFV-DRRGRGNRPHPHDGRPENRHPDPREIRTIFGGPTGGESSRKRKARARHARREP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATGCTGGAGAACTACTCAATGCTAGAGAGAATCCGGGAAATACTGCCCGAAGCCCCGAGTCAAAAATGGAAAGGCAGACCATTAGGCAAAATTCTCAAAAA
AGAGCAAAAGCTGACTACCAGCCTAAAGATCGACAGTTCCCGAAAAACATTCGAAGATATACCACAACAACTGTACCGGTAGAGCATATCTTGATGGAAATCAAG
GATAAGAATCTCCTCAGGTGGCCTGCTAAAAGACAACAGGGAAATTTTCCCCGAGATCAAAGCTGCTACTGTTTATTCCATAAAGAAGTTGGACACAACACTGCT
GAATGTGTTCGCTTGAAAGAAGAAATCGAGACACTGATACAACAAGGGTATCTTCAAGAGTTCGTAGATAGAAGAGGAAGAGGTAATCGCCCTCATCCGCATGAT
GGACGGCCAGAAAATAGGCATCCCGATCCACGTGAGATCCGAACGATATTTGGCGGACCAACTGGGGGAGAATCTAGTAGAAAGAGAAAAGCTCGGGCCAGACAT
GCACGACGTGAGCCTTATGACCACACTGTCTACACATCCACATCGAGGCCTTCTGAATTCACCATATGCTTCAACCGTTCGGTGAACAAAGTCTACACCAACCGC
ACAATGATGCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCATGCTGGAGAACTACTCAATGCTAGAGAGAATCCGGGAAATACTGCCCGAAGCCCCGAGTCAAAAATGGAAAGGCAGACCATTAGGCAAAATTCTCAAAAA
AGAGCAAAAGCTGACTACCAGCCTAAAGATCGACAGTTCCCGAAAAACATTCGAAGATATACCACAACAACTGTACCGGTAGAGCATATCTTGATGGAAATCAAG
GATAAGAATCTCCTCAGGTGGCCTGCTAAAAGACAACAGGGAAATTTTCCCCGAGATCAAAGCTGCTACTGTTTATTCCATAAAGAAGTTGGACACAACACTGCT
GAATGTGTTCGCTTGAAAGAAGAAATCGAGACACTGATACAACAAGGGTATCTTCAAGAGTTCGTAGATAGAAGAGGAAGAGGTAATCGCCCTCATCCGCATGAT
GGACGGCCAGAAAATAGGCATCCCGATCCACGTGAGATCCGAACGATATTTGGCGGACCAACTGGGGGAGAATCTAGTAGAAAGAGAAAAGCTCGGGCCAGACAT
GCACGACGTGAGCCTTATGACCACACTGTCTACACATCCACATCGAGGCCTTCTGAATTCACCATATGCTTCAACCGTTCGGTGAACAAAGTCTACACCAACCGC
ACAATGATGCACTAG
Protein sequenceShow/hide protein sequence
MHAGELLNARENPGNTARSPESKMERQTIRQNSQKRAKADYQPKDRQFPKNIRRYTTTTVPVEHILMEIKDKNLLRWPAKRQQGNFPRDQSCYCLFHKEVGHNTA
ECVRLKEEIETLIQQGYLQEFVDRRGRGNRPHPHDGRPENRHPDPREIRTIFGGPTGGESSRKRKARARHARREPYDHTVYTSTSRPSEFTICFNRSVNKVYTNR
TMMH