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Moc01g01590 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g01590
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr1:1110944..1111509
RNA-Seq ExpressionMoc01g01590
SyntenyMoc01g01590
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151684.1 uncharacterized protein LOC111019599 [Momordica charantia]5.2e-2075Show/hide
Query:  MERNDTTLQSQAASLRNLEIQVGQLATDLKSRPYGVLPSDTKVPKRDDKEQRNALTLRSGETLPTAHPNALEIYIE
        ME+ND T+QSQAASLRNLE+Q+GQLATDLKSRP   L SD KVPKRD+KEQ  ALTLRSG+TLPTA PNA  I+ E
Subjt:  MERNDTTLQSQAASLRNLEIQVGQLATDLKSRPYGVLPSDTKVPKRDDKEQRNALTLRSGETLPTAHPNALEIYIE

XP_022157438.1 uncharacterized protein LOC111024136 [Momordica charantia]5.5e-2265.91Show/hide
Query:  QRPSKGSFTSFENLMKKYMERNDTTLQSQAASLRNLEIQVGQLATDLKSRPYGVLPSDTKVPKRDDKEQRNALTLRSGETLPTAHPNA
        +R S+GSF S E LMK+YM  ND T++ Q + LRNLE+QVGQLATDL SRP G LPSDT+VPKRD KEQ  ALTL SG+ LP  H NA
Subjt:  QRPSKGSFTSFENLMKKYMERNDTTLQSQAASLRNLEIQVGQLATDLKSRPYGVLPSDTKVPKRDDKEQRNALTLRSGETLPTAHPNA

XP_022158598.1 uncharacterized protein LOC111025053 [Momordica charantia]4.4e-2777.65Show/hide
Query:  SKGSFTSFENLMKKYMERNDTTLQSQAASLRNLEIQVGQLATDLKSRPYGVLPSDTKVPKRDDKEQRNALTLRSGETLPTAHPNA
        SKGS TS EN+MK+YM  ND T+QSQAASLRNLE+QVGQLA DLKSRP G LPSDT+VPKRD KEQ NALTLRSG+ LP  HPNA
Subjt:  SKGSFTSFENLMKKYMERNDTTLQSQAASLRNLEIQVGQLATDLKSRPYGVLPSDTKVPKRDDKEQRNALTLRSGETLPTAHPNA

XP_022158740.1 uncharacterized protein LOC111025203 [Momordica charantia]4.8e-1871.83Show/hide
Query:  AMQRPSKGSFTSFENLMKKYMERNDTTLQSQAASLRNLEIQVGQLATDLKSRPYGVLPSDTKVPKRDDKEQ
        A Q+P KGSF S ENLMK+YME+N+ T+QS AASLRNLE+QVGQLATDLKSRPYG LPSDTKV ++    Q
Subjt:  AMQRPSKGSFTSFENLMKKYMERNDTTLQSQAASLRNLEIQVGQLATDLKSRPYGVLPSDTKVPKRDDKEQ

XP_022159060.1 uncharacterized protein LOC111025500 [Momordica charantia]1.1e-3070.43Show/hide
Query:  ICTTQAGGTILTFVEVEIREETMLVAMQRPSKGSFTSFENLMKKYMERNDTTLQSQAASLRNLEIQVGQLATDLKSRPYGVLPSDTKVPKRDDKEQRNAL
        I TT AGGTILT V VEIR+ETML                   KYME NDTT+QSQA SLRNLE+QVGQLATDLKS+P GVLPSD KVPKRD KEQ NAL
Subjt:  ICTTQAGGTILTFVEVEIREETMLVAMQRPSKGSFTSFENLMKKYMERNDTTLQSQAASLRNLEIQVGQLATDLKSRPYGVLPSDTKVPKRDDKEQRNAL

Query:  TLRSGETLPTAHPNA
        TLRSG+TLPTAHPNA
Subjt:  TLRSGETLPTAHPNA

TrEMBL top hitse value%identityAlignment
A0A6J1DDS7 uncharacterized protein LOC1110195992.5e-2075Show/hide
Query:  MERNDTTLQSQAASLRNLEIQVGQLATDLKSRPYGVLPSDTKVPKRDDKEQRNALTLRSGETLPTAHPNALEIYIE
        ME+ND T+QSQAASLRNLE+Q+GQLATDLKSRP   L SD KVPKRD+KEQ  ALTLRSG+TLPTA PNA  I+ E
Subjt:  MERNDTTLQSQAASLRNLEIQVGQLATDLKSRPYGVLPSDTKVPKRDDKEQRNALTLRSGETLPTAHPNALEIYIE

A0A6J1DTD1 uncharacterized protein LOC1110241362.7e-2265.91Show/hide
Query:  QRPSKGSFTSFENLMKKYMERNDTTLQSQAASLRNLEIQVGQLATDLKSRPYGVLPSDTKVPKRDDKEQRNALTLRSGETLPTAHPNA
        +R S+GSF S E LMK+YM  ND T++ Q + LRNLE+QVGQLATDL SRP G LPSDT+VPKRD KEQ  ALTL SG+ LP  H NA
Subjt:  QRPSKGSFTSFENLMKKYMERNDTTLQSQAASLRNLEIQVGQLATDLKSRPYGVLPSDTKVPKRDDKEQRNALTLRSGETLPTAHPNA

A0A6J1DWK1 uncharacterized protein LOC1110250532.1e-2777.65Show/hide
Query:  SKGSFTSFENLMKKYMERNDTTLQSQAASLRNLEIQVGQLATDLKSRPYGVLPSDTKVPKRDDKEQRNALTLRSGETLPTAHPNA
        SKGS TS EN+MK+YM  ND T+QSQAASLRNLE+QVGQLA DLKSRP G LPSDT+VPKRD KEQ NALTLRSG+ LP  HPNA
Subjt:  SKGSFTSFENLMKKYMERNDTTLQSQAASLRNLEIQVGQLATDLKSRPYGVLPSDTKVPKRDDKEQRNALTLRSGETLPTAHPNA

A0A6J1DWN2 uncharacterized protein LOC1110252032.3e-1871.83Show/hide
Query:  AMQRPSKGSFTSFENLMKKYMERNDTTLQSQAASLRNLEIQVGQLATDLKSRPYGVLPSDTKVPKRDDKEQ
        A Q+P KGSF S ENLMK+YME+N+ T+QS AASLRNLE+QVGQLATDLKSRPYG LPSDTKV ++    Q
Subjt:  AMQRPSKGSFTSFENLMKKYMERNDTTLQSQAASLRNLEIQVGQLATDLKSRPYGVLPSDTKVPKRDDKEQ

A0A6J1DXK5 uncharacterized protein LOC1110255005.4e-3170.43Show/hide
Query:  ICTTQAGGTILTFVEVEIREETMLVAMQRPSKGSFTSFENLMKKYMERNDTTLQSQAASLRNLEIQVGQLATDLKSRPYGVLPSDTKVPKRDDKEQRNAL
        I TT AGGTILT V VEIR+ETML                   KYME NDTT+QSQA SLRNLE+QVGQLATDLKS+P GVLPSD KVPKRD KEQ NAL
Subjt:  ICTTQAGGTILTFVEVEIREETMLVAMQRPSKGSFTSFENLMKKYMERNDTTLQSQAASLRNLEIQVGQLATDLKSRPYGVLPSDTKVPKRDDKEQRNAL

Query:  TLRSGETLPTAHPNA
        TLRSG+TLPTAHPNA
Subjt:  TLRSGETLPTAHPNA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGCCACATCCAAGGGATTTCTTGTTCTTTTTGCGAAGGAGAGCATCATTACAACAATTGCCTTGGCAATCCAGAGTCGGTGTACTATTTGGGAAATACTC
AGAACAATGGAAGCAACCCATATTCCAATATGTACAACCCAGGCTGGAGGAACCATCCTAACTTTTGTTGAAGTGGAAATCAGGGAGGAAACAATGCTGGTAGCA
ATGCAAAGGCCATCTAAAGGATCATTCACATCTTTCGAGAATCTAATGAAGAAGTATATGGAAAGGAATGATACCACGCTGCAAAGTCAGGCAGCATCGCTGAGG
AATCTAGAAATTCAGGTAGGTCAGTTGGCAACAGATCTGAAGAGTAGGCCTTATGGAGTGCTGCCCAGTGATACTAAGGTGCCCAAGAGGGACGACAAGGAGCAA
CGTAATGCTCTGACATTGCGGAGTGGCGAGACATTGCCTACTGCCCATCCAAATGCTTTAGAAATCTATATAGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGCCACATCCAAGGGATTTCTTGTTCTTTTTGCGAAGGAGAGCATCATTACAACAATTGCCTTGGCAATCCAGAGTCGGTGTACTATTTGGGAAATACTC
AGAACAATGGAAGCAACCCATATTCCAATATGTACAACCCAGGCTGGAGGAACCATCCTAACTTTTGTTGAAGTGGAAATCAGGGAGGAAACAATGCTGGTAGCA
ATGCAAAGGCCATCTAAAGGATCATTCACATCTTTCGAGAATCTAATGAAGAAGTATATGGAAAGGAATGATACCACGCTGCAAAGTCAGGCAGCATCGCTGAGG
AATCTAGAAATTCAGGTAGGTCAGTTGGCAACAGATCTGAAGAGTAGGCCTTATGGAGTGCTGCCCAGTGATACTAAGGTGCCCAAGAGGGACGACAAGGAGCAA
CGTAATGCTCTGACATTGCGGAGTGGCGAGACATTGCCTACTGCCCATCCAAATGCTTTAGAAATCTATATAGAATAA
Protein sequenceShow/hide protein sequence
MLATSKGFLVLFAKESIITTIALAIQSRCTIWEILRTMEATHIPICTTQAGGTILTFVEVEIREETMLVAMQRPSKGSFTSFENLMKKYMERNDTTLQSQAASLR
NLEIQVGQLATDLKSRPYGVLPSDTKVPKRDDKEQRNALTLRSGETLPTAHPNALEIYIE