; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc01g01670 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g01670
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr1:1146196..1147975
RNA-Seq ExpressionMoc01g01670
SyntenyMoc01g01670
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsIPR041373 - Reverse transcriptase, RNase H-like domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150099.1 uncharacterized protein LOC111018360 [Momordica charantia]1.4e-7788.17Show/hide
Query:  KQPGDAFEDLKAAMTKGSVLGLADVAKLFEVETDASDYALGGVLLPDGHPIAYESRKLNNAERCYTVSEKEMLVVVHCLRSWRQYLLGSRFIMKTDNSAI
        K+  DAFEDLKAAM KG VLGLADV K FEVETDASDYALGGVLL D HPI YESRKLNNAER YTVSEKEML VVHCLRSWRQYLLGS F++KTDNSAI
Subjt:  KQPGDAFEDLKAAMTKGSVLGLADVAKLFEVETDASDYALGGVLLPDGHPIAYESRKLNNAERCYTVSEKEMLVVVHCLRSWRQYLLGSRFIMKTDNSAI

Query:  CHFFNQPKLTSKQARWQELLAEFDFKFEHKAGKSNQAANALSRKGEHAALCMLAHIHASKVDGSIHDLI
        CHFFNQPKLTSKQARWQELLAEFDFKFEHKAGKSNQAA+ALSRKGEHA LCMLAHIH SK DGSI DLI
Subjt:  CHFFNQPKLTSKQARWQELLAEFDFKFEHKAGKSNQAANALSRKGEHAALCMLAHIHASKVDGSIHDLI

XP_022150099.1 uncharacterized protein LOC111018360 [Momordica charantia]1.1e-2682.5Show/hide
Query:  MKAINFEALPIGRVSKRVLLKLGTWTDSVDLMAVRMDDFNVVLGMEFLIEHKVIAMHLAKCMIVTSSNPTVVTTSIKQPG
        MK +NFEALPI  VSKRV+LKLGTWT SVD + VRMDDF+VVLGMEFLIEHKVI M LAKCMIVTS++PTVVTTSIKQPG
Subjt:  MKAINFEALPIGRVSKRVLLKLGTWTDSVDLMAVRMDDFNVVLGMEFLIEHKVIAMHLAKCMIVTSSNPTVVTTSIKQPG

XP_022150099.1 uncharacterized protein LOC111018360 [Momordica charantia]1.7e-7281.71Show/hide
Query:  AFEDLKAAMTKGSVLGLADVAKLFEVETDASDYALGGVLLPDGHPIAYESRKLNNAERCYTVSEKEMLVVVHCLRSWRQYLLGSRFIMKTDNSAICHFFN
        AFEDLK  MT+G VLGL DV K FE+ETDASD+ALGGVL+ +GHPIA+ESRKLN+AER YTVSEKEML VVHCLR WRQYLLGS+F++KTDNSAICHFF+
Subjt:  AFEDLKAAMTKGSVLGLADVAKLFEVETDASDYALGGVLLPDGHPIAYESRKLNNAERCYTVSEKEMLVVVHCLRSWRQYLLGSRFIMKTDNSAICHFFN

Query:  QPKLTSKQARWQELLAEFDFKFEHKAGKSNQAANALSRKGEHAALCMLAHIHASKVDGSIHDLI
        QPKLT+KQARWQ+ LAEFDFKFEHKAGKSNQAA+ALSRKGEHAALCMLAHIH+SK+DGS+ D+I
Subjt:  QPKLTSKQARWQELLAEFDFKFEHKAGKSNQAANALSRKGEHAALCMLAHIHASKVDGSIHDLI

XP_022975176.1 uncharacterized protein LOC111474215 [Cucurbita maxima]2.2e-1465.62Show/hide
Query:  VLLKLGTWTDSVDLMAVRMDDFNVVLGMEFLIEHKVIAMHLAKCMIVTSSNPTVVTTSIKQPGD
        V  K+G WT  +DL+  RMDDF+VVLGMEFL+EHKVI M LAKC++VT  NPTV+  SIKQPG+
Subjt:  VLLKLGTWTDSVDLMAVRMDDFNVVLGMEFLIEHKVIAMHLAKCMIVTSSNPTVVTTSIKQPGD

XP_022975516.1 uncharacterized protein LOC111474945, partial [Cucurbita maxima]1.4e-1360.29Show/hide
Query:  VLLKLGTWTDSVDLMAVRMDDFNVVLGMEFLIEHKVIAMHLAKCMIVTSSNPTVVTTSIKQPGDAFED
        V  K+G WT  +DL+  RMDDF+VVLGMEFL+EHKVI M LAKC+++T  NPTV+  SIKQP    E+
Subjt:  VLLKLGTWTDSVDLMAVRMDDFNVVLGMEFLIEHKVIAMHLAKCMIVTSSNPTVVTTSIKQPGDAFED

XP_022975516.1 uncharacterized protein LOC111474945, partial [Cucurbita maxima]3.0e-7282.32Show/hide
Query:  AFEDLKAAMTKGSVLGLADVAKLFEVETDASDYALGGVLLPDGHPIAYESRKLNNAERCYTVSEKEMLVVVHCLRSWRQYLLGSRFIMKTDNSAICHFFN
        AFE+LK  MT+G VLGL DV K FEVETDASD+ALGGVL+ +GHPIAYESRKLN+AER YTVSEKEML VVHCLR WRQYLLGS+F++KTDNSA CHFF+
Subjt:  AFEDLKAAMTKGSVLGLADVAKLFEVETDASDYALGGVLLPDGHPIAYESRKLNNAERCYTVSEKEMLVVVHCLRSWRQYLLGSRFIMKTDNSAICHFFN

Query:  QPKLTSKQARWQELLAEFDFKFEHKAGKSNQAANALSRKGEHAALCMLAHIHASKVDGSIHDLI
        QPKLT+KQARWQE LAEFDFKFEHKAGKSNQAA+ALSRKGEHAALCMLAHIH+SK+DGS+ D+I
Subjt:  QPKLTSKQARWQELLAEFDFKFEHKAGKSNQAANALSRKGEHAALCMLAHIHASKVDGSIHDLI

XP_023524533.1 uncharacterized protein LOC111788429 [Cucurbita pepo subsp. pepo]6.9e-2166.67Show/hide
Query:  MKAINFEALPIGRVSKRVLLKLGTWTDSVDLMAVRMDDFNVVLGMEFLIEHKVIAMHLAKCMIVTSSNPTVVTTSIKQPGD
        MKA+N EALPI  VSK V  K+G WT  +DL+ VRMDDF+VVLGMEFL+EHKVI M LAKC+++T  NPTV+  SIKQPG+
Subjt:  MKAINFEALPIGRVSKRVLLKLGTWTDSVDLMAVRMDDFNVVLGMEFLIEHKVIAMHLAKCMIVTSSNPTVVTTSIKQPGD

XP_023524533.1 uncharacterized protein LOC111788429 [Cucurbita pepo subsp. pepo]5.2e-6978.66Show/hide
Query:  AFEDLKAAMTKGSVLGLADVAKLFEVETDASDYALGGVLLPDGHPIAYESRKLNNAERCYTVSEKEMLVVVHCLRSWRQYLLGSRFIMKTDNSAICHFFN
        AFEDLK  M  G VLGL DV K FE+ETDASD+ALGGVL+ +GHPIA+ESRKLN+AER Y VSEK+ML VVHCLR WRQYLLGS+F++KTDNS ICHFF+
Subjt:  AFEDLKAAMTKGSVLGLADVAKLFEVETDASDYALGGVLLPDGHPIAYESRKLNNAERCYTVSEKEMLVVVHCLRSWRQYLLGSRFIMKTDNSAICHFFN

Query:  QPKLTSKQARWQELLAEFDFKFEHKAGKSNQAANALSRKGEHAALCMLAHIHASKVDGSIHDLI
        QPKLT+KQARWQE LA+FDFKF+HKAGKSNQAA+ALSRKGEHAALCMLAHIH+SK+DGS+ D+I
Subjt:  QPKLTSKQARWQELLAEFDFKFEHKAGKSNQAANALSRKGEHAALCMLAHIHASKVDGSIHDLI

XP_023537907.1 uncharacterized protein LOC111798805 [Cucurbita pepo subsp. pepo]6.9e-2166.67Show/hide
Query:  MKAINFEALPIGRVSKRVLLKLGTWTDSVDLMAVRMDDFNVVLGMEFLIEHKVIAMHLAKCMIVTSSNPTVVTTSIKQPGD
        MKA+N EALPI  VSK V  K+G WT  +DL+ VRMDDF+VVLGMEFL+EHKVI M LAKC+++T  NPTV+  SIKQPG+
Subjt:  MKAINFEALPIGRVSKRVLLKLGTWTDSVDLMAVRMDDFNVVLGMEFLIEHKVIAMHLAKCMIVTSSNPTVVTTSIKQPGD

XP_023537907.1 uncharacterized protein LOC111798805 [Cucurbita pepo subsp. pepo]3.0e-7282.32Show/hide
Query:  AFEDLKAAMTKGSVLGLADVAKLFEVETDASDYALGGVLLPDGHPIAYESRKLNNAERCYTVSEKEMLVVVHCLRSWRQYLLGSRFIMKTDNSAICHFFN
        AFE+LK  MT+G VLGL DV K FEVETDASD+ALGGVL+ +GHPIAYESRKLN+AER YTVSEKEML VVHCLR WRQYLLGS+F++KTDNSA CHFF+
Subjt:  AFEDLKAAMTKGSVLGLADVAKLFEVETDASDYALGGVLLPDGHPIAYESRKLNNAERCYTVSEKEMLVVVHCLRSWRQYLLGSRFIMKTDNSAICHFFN

Query:  QPKLTSKQARWQELLAEFDFKFEHKAGKSNQAANALSRKGEHAALCMLAHIHASKVDGSIHDLI
        QPKLT+KQARWQE LAEFDFKFEHKAGKSNQAA+ALSRKGEHAALCMLAHIH+SK+DGS+ D+I
Subjt:  QPKLTSKQARWQELLAEFDFKFEHKAGKSNQAANALSRKGEHAALCMLAHIHASKVDGSIHDLI

TrEMBL top hitse value%identityAlignment
A0A6J1D906 Reverse transcriptase6.7e-7888.17Show/hide
Query:  KQPGDAFEDLKAAMTKGSVLGLADVAKLFEVETDASDYALGGVLLPDGHPIAYESRKLNNAERCYTVSEKEMLVVVHCLRSWRQYLLGSRFIMKTDNSAI
        K+  DAFEDLKAAM KG VLGLADV K FEVETDASDYALGGVLL D HPI YESRKLNNAER YTVSEKEML VVHCLRSWRQYLLGS F++KTDNSAI
Subjt:  KQPGDAFEDLKAAMTKGSVLGLADVAKLFEVETDASDYALGGVLLPDGHPIAYESRKLNNAERCYTVSEKEMLVVVHCLRSWRQYLLGSRFIMKTDNSAI

Query:  CHFFNQPKLTSKQARWQELLAEFDFKFEHKAGKSNQAANALSRKGEHAALCMLAHIHASKVDGSIHDLI
        CHFFNQPKLTSKQARWQELLAEFDFKFEHKAGKSNQAA+ALSRKGEHA LCMLAHIH SK DGSI DLI
Subjt:  CHFFNQPKLTSKQARWQELLAEFDFKFEHKAGKSNQAANALSRKGEHAALCMLAHIHASKVDGSIHDLI

A0A6J1D906 Reverse transcriptase5.4e-2782.5Show/hide
Query:  MKAINFEALPIGRVSKRVLLKLGTWTDSVDLMAVRMDDFNVVLGMEFLIEHKVIAMHLAKCMIVTSSNPTVVTTSIKQPG
        MK +NFEALPI  VSKRV+LKLGTWT SVD + VRMDDF+VVLGMEFLIEHKVI M LAKCMIVTS++PTVVTTSIKQPG
Subjt:  MKAINFEALPIGRVSKRVLLKLGTWTDSVDLMAVRMDDFNVVLGMEFLIEHKVIAMHLAKCMIVTSSNPTVVTTSIKQPG

A0A6J1D906 Reverse transcriptase8.4e-7381.71Show/hide
Query:  AFEDLKAAMTKGSVLGLADVAKLFEVETDASDYALGGVLLPDGHPIAYESRKLNNAERCYTVSEKEMLVVVHCLRSWRQYLLGSRFIMKTDNSAICHFFN
        AFEDLK  MT+G VLGL DV K FE+ETDASD+ALGGVL+ +GHPIA+ESRKLN+AER YTVSEKEML VVHCLR WRQYLLGS+F++KTDNSAICHFF+
Subjt:  AFEDLKAAMTKGSVLGLADVAKLFEVETDASDYALGGVLLPDGHPIAYESRKLNNAERCYTVSEKEMLVVVHCLRSWRQYLLGSRFIMKTDNSAICHFFN

Query:  QPKLTSKQARWQELLAEFDFKFEHKAGKSNQAANALSRKGEHAALCMLAHIHASKVDGSIHDLI
        QPKLT+KQARWQ+ LAEFDFKFEHKAGKSNQAA+ALSRKGEHAALCMLAHIH+SK+DGS+ D+I
Subjt:  QPKLTSKQARWQELLAEFDFKFEHKAGKSNQAANALSRKGEHAALCMLAHIHASKVDGSIHDLI

A0A6J1DLQ6 uncharacterized protein LOC1110223201.5e-6676.22Show/hide
Query:  AFEDLKAAMTKGSVLGLADVAKLFEVETDASDYALGGVLLPDGHPIAYESRKLNNAERCYTVSEKEMLVVVHCLRSWRQYLLGSRFIMKTDNSAICHFFN
        AFE LK AM +GSVLG+ADV + FEVETDASD+ALGGVLL DGHPIAYES+KLN+AER Y  SEKEML VVHCLR+WRQYLLG++F++KTDNS++CHFFN
Subjt:  AFEDLKAAMTKGSVLGLADVAKLFEVETDASDYALGGVLLPDGHPIAYESRKLNNAERCYTVSEKEMLVVVHCLRSWRQYLLGSRFIMKTDNSAICHFFN

Query:  QPKLTSKQARWQELLAEFDFKFEHKAGKSNQAANALSRKGEHAALCMLAHIHASKVDGSIHDLI
        QPKL+SKQARWQE LAEFDF+FEHK G++NQAA+ALSRK E AALCMLAH+ ASK+ GSI + I
Subjt:  QPKLTSKQARWQELLAEFDFKFEHKAGKSNQAANALSRKGEHAALCMLAHIHASKVDGSIHDLI

A0A6J1DLQ6 uncharacterized protein LOC1110223204.9e-2068.35Show/hide
Query:  MKAINFEALPIGRVSKRVLLKLGTWTDSVDLMAVRMDDFNVVLGMEFLIEHKVIAMHLAKCMIVTSSNPTVVTTSIKQP
        MKA+N  ALPI  V+KRV +KLGTW+  VD + VRMDDF+VVLG++FL+EHKVI M LAKC++VTSS+P VV TSIKQP
Subjt:  MKAINFEALPIGRVSKRVLLKLGTWTDSVDLMAVRMDDFNVVLGMEFLIEHKVIAMHLAKCMIVTSSNPTVVTTSIKQP

A0A6J1IDF7 uncharacterized protein LOC1114742151.0e-1465.62Show/hide
Query:  VLLKLGTWTDSVDLMAVRMDDFNVVLGMEFLIEHKVIAMHLAKCMIVTSSNPTVVTTSIKQPGD
        V  K+G WT  +DL+  RMDDF+VVLGMEFL+EHKVI M LAKC++VT  NPTV+  SIKQPG+
Subjt:  VLLKLGTWTDSVDLMAVRMDDFNVVLGMEFLIEHKVIAMHLAKCMIVTSSNPTVVTTSIKQPGD

A0A6J1IDF7 uncharacterized protein LOC1114742151.5e-6677.91Show/hide
Query:  FEDLKAAMTKGSVLGLADVAKLFEVETDASDYALGGVLLPDGHPIAYESRKLNNAERCYTVSEKEMLVVVHCLRSWRQYLLGSRFIMKTDNSAICHFFNQ
        FEDLKA MT+  VL L DV K FE+ETDASD+ALGGVL+ +GH IAYESRKLN+AER YTVSEKEML VVHCLR WRQYLLGS+FI+K DNS ICHFF+Q
Subjt:  FEDLKAAMTKGSVLGLADVAKLFEVETDASDYALGGVLLPDGHPIAYESRKLNNAERCYTVSEKEMLVVVHCLRSWRQYLLGSRFIMKTDNSAICHFFNQ

Query:  PKLTSKQARWQELLAEFDFKFEHKAGKSNQAANALSRKGEHAALCMLAHIHASKVDGSIHDLI
        PKLT KQARWQE LAEFDFKFEHKAGKSNQ A+ALS+KGEHAALCM A+I +SK+DGS+H++I
Subjt:  PKLTSKQARWQELLAEFDFKFEHKAGKSNQAANALSRKGEHAALCMLAHIHASKVDGSIHDLI

A0A6J1IEF9 uncharacterized protein LOC1114749456.8e-1460.29Show/hide
Query:  VLLKLGTWTDSVDLMAVRMDDFNVVLGMEFLIEHKVIAMHLAKCMIVTSSNPTVVTTSIKQPGDAFED
        V  K+G WT  +DL+  RMDDF+VVLGMEFL+EHKVI M LAKC+++T  NPTV+  SIKQP    E+
Subjt:  VLLKLGTWTDSVDLMAVRMDDFNVVLGMEFLIEHKVIAMHLAKCMIVTSSNPTVVTTSIKQPGDAFED

A0A6J1IEF9 uncharacterized protein LOC1114749452.5e-6978.66Show/hide
Query:  AFEDLKAAMTKGSVLGLADVAKLFEVETDASDYALGGVLLPDGHPIAYESRKLNNAERCYTVSEKEMLVVVHCLRSWRQYLLGSRFIMKTDNSAICHFFN
        AFEDLK  M  G VLGL DV K FE+ETDASD+ALGGVL+ +GHPIA+ESRKLN+AER Y VSEK+ML VVHCLR WRQYLLGS+F++KTDNS ICHFF+
Subjt:  AFEDLKAAMTKGSVLGLADVAKLFEVETDASDYALGGVLLPDGHPIAYESRKLNNAERCYTVSEKEMLVVVHCLRSWRQYLLGSRFIMKTDNSAICHFFN

Query:  QPKLTSKQARWQELLAEFDFKFEHKAGKSNQAANALSRKGEHAALCMLAHIHASKVDGSIHDLI
        QPKLT+KQARWQE LA+FDFKF+HKAGKSNQAA+ALSRKGEHAALCMLAHIH+SK+DGS+ D+I
Subjt:  QPKLTSKQARWQELLAEFDFKFEHKAGKSNQAANALSRKGEHAALCMLAHIHASKVDGSIHDLI

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.61.4e-2437.93Show/hide
Query:  EFLIEHKVIAMHLAKCMIVTSSNPTVVTTSIKQPGDAFEDLKAAMTKGSVLGLADVAKLFEVETDASDYALGGVLLPDGHPIAYESRKLNNAERCYTVSE
        +F+     IA  + KC+     N  + TT+  +   AF+ LK  +++  +L + D  K F + TDASD ALG VL  DGHP++Y SR LN  E  Y+  E
Subjt:  EFLIEHKVIAMHLAKCMIVTSSNPTVVTTSIKQPGDAFEDLKAAMTKGSVLGLADVAKLFEVETDASDYALGGVLLPDGHPIAYESRKLNNAERCYTVSE

Query:  KEMLVVVHCLRSWRQYLLGSRFIMKTDNSAICHFFNQPKLTSKQARWQELLAEFDFKFEHKAGKSNQAANALSR
        KE+L +V   +++R YLLG  F + +D+  +   +      SK  RW+  L+EFDF  ++  GK N  A+ALSR
Subjt:  KEMLVVVHCLRSWRQYLLGSRFIMKTDNSAICHFFNQPKLTSKQARWQELLAEFDFKFEHKAGKSNQAANALSR

P0CT41 Transposon Tf2-12 polyprotein1.8e-1636.73Show/hide
Query:  AFEDLKAAMTKGSVLGLADVAKLFEVETDASDYALGGVLLPDG-----HPIAYESRKLNNAERCYTVSEKEMLVVVHCLRSWRQYLLGS--RFIMKTDN-
        A E++K  +    VL   D +K   +ETDASD A+G VL         +P+ Y S K++ A+  Y+VS+KEML ++  L+ WR YL  +   F + TD+ 
Subjt:  AFEDLKAAMTKGSVLGLADVAKLFEVETDASDYALGGVLLPDG-----HPIAYESRKLNNAERCYTVSEKEMLVVVHCLRSWRQYLLGS--RFIMKTDN-

Query:  SAICHFFNQPKLTSKQ-ARWQELLAEFDFKFEHKAGKSNQAANALSR
        + I    N+ +  +K+ ARWQ  L +F+F+  ++ G +N  A+ALSR
Subjt:  SAICHFFNQPKLTSKQ-ARWQELLAEFDFKFEHKAGKSNQAANALSR

P20825 Retrovirus-related Pol polyprotein from transposon 2971.8e-2438.89Show/hide
Query:  LAKCMIVTSSNPTVVTTSIKQPGDAFEDLKAAMTKGSVLGLADVAKLFEVETDASDYALGGVLLPDGHPIAYESRKLNNAERCYTVSEKEMLVVVHCLRS
        +AK M       T + T   +  +AFE LKA + +  +L L D  K F + TDAS+ ALG VL  +GHPI++ SR LN+ E  Y+  EKE+L +V   ++
Subjt:  LAKCMIVTSSNPTVVTTSIKQPGDAFEDLKAAMTKGSVLGLADVAKLFEVETDASDYALGGVLLPDGHPIAYESRKLNNAERCYTVSEKEMLVVVHCLRS

Query:  WRQYLLGSRFIMKTDNSAICHFFNQPKLTSKQARWQELLAEFDFKFEHKAGKSNQAANALSR
        +R YLLG +F++ +D+  +    N  +  +K  RW+  L+E+ FK ++  GK N  A+ALSR
Subjt:  WRQYLLGSRFIMKTDNSAICHFFNQPKLTSKQARWQELLAEFDFKFEHKAGKSNQAANALSR

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus2.8e-1735.19Show/hide
Query:  IVTSSNPTVVTTSIKQPGDAFEDLKAAMTKGSVLGLADVAKLFEVETDASDYALGGVLLPD----GHPIAYESRKLNNAERCYTVSEKEMLVVVHCLRSW
        I +S +  V  T  +    +F DLK+ +    +L      K F + TDAS++A+G VL  D      PIAY SR LN  E  Y   EKEML ++  L + 
Subjt:  IVTSSNPTVVTTSIKQPGDAFEDLKAAMTKGSVLGLADVAKLFEVETDASDYALGGVLLPD----GHPIAYESRKLNNAERCYTVSEKEMLVVVHCLRSW

Query:  RQYLLGSRFI-MKTDNSAICHFFNQPKLTSKQARWQELLAEFDFKFEHKAGKSNQAANALSR
        R YL G+  I + TD+  +          +K  RW+  + E++ +  +K GKSN  A+ALSR
Subjt:  RQYLLGSRFI-MKTDNSAICHFFNQPKLTSKQARWQELLAEFDFKFEHKAGKSNQAANALSR

Q9UR07 Transposon Tf2-11 polyprotein1.8e-1636.73Show/hide
Query:  AFEDLKAAMTKGSVLGLADVAKLFEVETDASDYALGGVLLPDG-----HPIAYESRKLNNAERCYTVSEKEMLVVVHCLRSWRQYLLGS--RFIMKTDN-
        A E++K  +    VL   D +K   +ETDASD A+G VL         +P+ Y S K++ A+  Y+VS+KEML ++  L+ WR YL  +   F + TD+ 
Subjt:  AFEDLKAAMTKGSVLGLADVAKLFEVETDASDYALGGVLLPDG-----HPIAYESRKLNNAERCYTVSEKEMLVVVHCLRSWRQYLLGS--RFIMKTDN-

Query:  SAICHFFNQPKLTSKQ-ARWQELLAEFDFKFEHKAGKSNQAANALSR
        + I    N+ +  +K+ ARWQ  L +F+F+  ++ G +N  A+ALSR
Subjt:  SAICHFFNQPKLTSKQ-ARWQELLAEFDFKFEHKAGKSNQAANALSR

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGCCATCAATTTTGAAGCTCTACCCATTGGCAGAGTTTCTAAGAGAGTGTTGTTGAAATTAGGGACGTGGACAGACAGTGTCGATTTAATGGCGGTTCGC
ATGGACGACTTCAACGTTGTACTGGGGATGGAGTTCCTCATTGAGCATAAAGTCATAGCGATGCATTTGGCCAAATGCATGATCGTCACTAGTAGCAATCCCACC
GTGGTTACTACTAGCATCAAACAACCTGGTGATGCCTTCGAGGATCTAAAGGCAGCCATGACAAAGGGTTCAGTACTTGGGCTTGCAGATGTGGCAAAACTGTTT
GAAGTAGAAACTGATGCTTCGGACTATGCGTTAGGCGGCGTTCTACTTCCAGATGGCCATCCTATTGCTTACGAAAGTCGTAAGCTGAACAACGCTGAACGATGC
TATACCGTATCTGAGAAAGAAATGTTGGTGGTGGTACATTGTCTCAGGTCTTGGAGACAATACTTGTTGGGCTCGCGCTTCATCATGAAAACAGACAATAGTGCA
ATCTGTCACTTCTTCAATCAACCGAAGCTGACATCCAAGCAAGCCAGGTGGCAAGAGTTGTTGGCTGAGTTTGATTTCAAGTTTGAGCATAAGGCAGGGAAGTCG
AACCAAGCCGCTAACGCCTTGAGTCGAAAAGGCGAACATGCGGCCCTGTGCATGTTAGCCCATATCCACGCTAGTAAGGTGGACGGGTCGATTCACGATCTCATT
TGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGCCATCAATTTTGAAGCTCTACCCATTGGCAGAGTTTCTAAGAGAGTGTTGTTGAAATTAGGGACGTGGACAGACAGTGTCGATTTAATGGCGGTTCGC
ATGGACGACTTCAACGTTGTACTGGGGATGGAGTTCCTCATTGAGCATAAAGTCATAGCGATGCATTTGGCCAAATGCATGATCGTCACTAGTAGCAATCCCACC
GTGGTTACTACTAGCATCAAACAACCTGGTGATGCCTTCGAGGATCTAAAGGCAGCCATGACAAAGGGTTCAGTACTTGGGCTTGCAGATGTGGCAAAACTGTTT
GAAGTAGAAACTGATGCTTCGGACTATGCGTTAGGCGGCGTTCTACTTCCAGATGGCCATCCTATTGCTTACGAAAGTCGTAAGCTGAACAACGCTGAACGATGC
TATACCGTATCTGAGAAAGAAATGTTGGTGGTGGTACATTGTCTCAGGTCTTGGAGACAATACTTGTTGGGCTCGCGCTTCATCATGAAAACAGACAATAGTGCA
ATCTGTCACTTCTTCAATCAACCGAAGCTGACATCCAAGCAAGCCAGGTGGCAAGAGTTGTTGGCTGAGTTTGATTTCAAGTTTGAGCATAAGGCAGGGAAGTCG
AACCAAGCCGCTAACGCCTTGAGTCGAAAAGGCGAACATGCGGCCCTGTGCATGTTAGCCCATATCCACGCTAGTAAGGTGGACGGGTCGATTCACGATCTCATT
TGA
Protein sequenceShow/hide protein sequence
MKAINFEALPIGRVSKRVLLKLGTWTDSVDLMAVRMDDFNVVLGMEFLIEHKVIAMHLAKCMIVTSSNPTVVTTSIKQPGDAFEDLKAAMTKGSVLGLADVAKLF
EVETDASDYALGGVLLPDGHPIAYESRKLNNAERCYTVSEKEMLVVVHCLRSWRQYLLGSRFIMKTDNSAICHFFNQPKLTSKQARWQELLAEFDFKFEHKAGKS
NQAANALSRKGEHAALCMLAHIHASKVDGSIHDLI