; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc01g01760 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g01760
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionProtein SUPPRESSOR OF SILENCING 3
Genome locationchr1:1184507..1187694
RNA-Seq ExpressionMoc01g01760
SyntenyMoc01g01760
Gene Ontology termsGO:0006952 - defense response (biological process)
GO:0010073 - meristem maintenance (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5751757.1 Protein SUPPRESSOR OF SILENCING 3 [Tripterygium wilfordii]1.4e-1751.2Show/hide
Query:  FSPSPIDSFDKIFDGVPSGLEVQLGCSDEI-QLVGLKKWEAAGFTICSFGLVKCLLSWSLEVAIGLFDDPAAFDGGVWL---SDGPVRRCTTSRNVVVSV
        FS S +DSF+KI DGVP+GL  +    D + +L GLK  E  G TI SFGL+ CLLSWSLEV + +   P AF         SDGPV RCTTSR   VSV
Subjt:  FSPSPIDSFDKIFDGVPSGLEVQLGCSDEI-QLVGLKKWEAAGFTICSFGLVKCLLSWSLEVAIGLFDDPAAFDGGVWL---SDGPVRRCTTSRNVVVSV

Query:  WTNVVKGLQPTRLWLAAFSITMQLI
         T VVKGLQ    W+  FS+ +  I
Subjt:  WTNVVKGLQPTRLWLAAFSITMQLI

TXG60213.1 hypothetical protein EZV62_014786 [Acer yangbiense]1.0e-1750.79Show/hide
Query:  DSFDKIFDGVPSGLEVQLGC----SDE--IQLVGLKKWEAAGFTICSFGLVKCLLSWSLEVAIGLFDDPAAFDG----GVWLSDGPVRRCTTSRNVVVSV
        DSF+KI DGVP+GL + LG      DE  ++L+G       G TI S GLV CLLSWSL  A+ LF  P            LSDGPV+RCT SR V VSV
Subjt:  DSFDKIFDGVPSGLEVQLGC----SDE--IQLVGLKKWEAAGFTICSFGLVKCLLSWSLEVAIGLFDDPAAFDG----GVWLSDGPVRRCTTSRNVVVSV

Query:  WTNVVKGLQPTRLWLAAFSITMQLIY
        WTNVV GLQP   WLA  S+ M + +
Subjt:  WTNVVKGLQPTRLWLAAFSITMQLIY

XP_020540099.1 putative pentatricopeptide repeat-containing protein At5g08490 [Jatropha curcas]5.2e-1738.04Show/hide
Query:  CHHSIVMESAMDV-----DVHSSVQVGAGDRVRARYVKNRGANS---------CINNSFSPSPIDSFDKIFDGVPSGLEVQLGCSDEI-QLVGLKKWEAA
        C H+ +++  + +           Q+  G   ++R++   G +          CI+ S S S ID+F+KI +GVP+GL  + G  D +  + GLK     
Subjt:  CHHSIVMESAMDV-----DVHSSVQVGAGDRVRARYVKNRGANS---------CINNSFSPSPIDSFDKIFDGVPSGLEVQLGCSDEI-QLVGLKKWEAA

Query:  GFTICSFGLVKCLLSWSLEVAIGLFDDPAAFDGGV----WLSDGPVRRCTTSRNVVVSVWTNVVKGLQPTRLWLAAFSITMQLI
        G  I S GL  CLLSWSL+V + +   PA F   V     LSDGPV RCT SR   VSV T VV GLQP   WLA FS+ + L+
Subjt:  GFTICSFGLVKCLLSWSLEVAIGLFDDPAAFDGGV----WLSDGPVRRCTTSRNVVVSVWTNVVKGLQPTRLWLAAFSITMQLI

XP_022149984.1 serine/threonine-protein phosphatase 7 long form homolog [Momordica charantia]4.2e-1978.12Show/hide
Query:  MYKVPTPARGPRRRGCRQVDQDAPMELDDPVPEVIYYNVKDVLSFTQTQDDVGLSMPMVMIPTP
        MY V TPARGPR RG RQVDQDAP+ELDDPVPEVIY+NV+D+  FTQTQDD G S PM MIPTP
Subjt:  MYKVPTPARGPRRRGCRQVDQDAPMELDDPVPEVIYYNVKDVLSFTQTQDDVGLSMPMVMIPTP

XP_022152034.1 disease resistance protein RGA2-like [Momordica charantia]5.7e-1661.04Show/hide
Query:  GRHLQILHQMYKVPTPARGPRRRGCRQVDQDAPMELDDPVPEVIYYNVKDVLSFTQTQDDVGLSMPMVMIPTPSITH
        GRHLQ LHQMY+VP P     RRG RQ++QDAP E + P PE IY+NV  V  F +TQ+DVG   PMVMIPTPS +H
Subjt:  GRHLQILHQMYKVPTPARGPRRRGCRQVDQDAPMELDDPVPEVIYYNVKDVLSFTQTQDDVGLSMPMVMIPTPSITH

TrEMBL top hitse value%identityAlignment
A0A5C7HSY2 Uncharacterized protein5.0e-1850.79Show/hide
Query:  DSFDKIFDGVPSGLEVQLGC----SDE--IQLVGLKKWEAAGFTICSFGLVKCLLSWSLEVAIGLFDDPAAFDG----GVWLSDGPVRRCTTSRNVVVSV
        DSF+KI DGVP+GL + LG      DE  ++L+G       G TI S GLV CLLSWSL  A+ LF  P            LSDGPV+RCT SR V VSV
Subjt:  DSFDKIFDGVPSGLEVQLGC----SDE--IQLVGLKKWEAAGFTICSFGLVKCLLSWSLEVAIGLFDDPAAFDG----GVWLSDGPVRRCTTSRNVVVSV

Query:  WTNVVKGLQPTRLWLAAFSITMQLIY
        WTNVV GLQP   WLA  S+ M + +
Subjt:  WTNVVKGLQPTRLWLAAFSITMQLIY

A0A6D2IHH6 Uncharacterized protein4.7e-1647.79Show/hide
Query:  NSFSPSPIDSFDKIFDGVPSGLEVQL---GCSDEIQLVGLKKWEAAGFTICSFGLVKCLLSWSLEV---AIGLFDDPAAFDGGVWLSDGPVRRCTTSRNV
        ++FSPS  D  +   +GVP+GL ++       D +  +GLK   + G TI SFGL+ CLLSWSLEV    +G+F   A+       SDGPV+RCT S  V
Subjt:  NSFSPSPIDSFDKIFDGVPSGLEVQL---GCSDEIQLVGLKKWEAAGFTICSFGLVKCLLSWSLEV---AIGLFDDPAAFDGGVWLSDGPVRRCTTSRNV

Query:  VVSVWTNVVKGLQ
        +VSVWTNVV GLQ
Subjt:  VVSVWTNVVKGLQ

A0A6J1D8N6 serine/threonine-protein phosphatase 7 long form homolog2.0e-1978.12Show/hide
Query:  MYKVPTPARGPRRRGCRQVDQDAPMELDDPVPEVIYYNVKDVLSFTQTQDDVGLSMPMVMIPTP
        MY V TPARGPR RG RQVDQDAP+ELDDPVPEVIY+NV+D+  FTQTQDD G S PM MIPTP
Subjt:  MYKVPTPARGPRRRGCRQVDQDAPMELDDPVPEVIYYNVKDVLSFTQTQDDVGLSMPMVMIPTP

A0A6J1DEU3 disease resistance protein RGA2-like2.8e-1661.04Show/hide
Query:  GRHLQILHQMYKVPTPARGPRRRGCRQVDQDAPMELDDPVPEVIYYNVKDVLSFTQTQDDVGLSMPMVMIPTPSITH
        GRHLQ LHQMY+VP P     RRG RQ++QDAP E + P PE IY+NV  V  F +TQ+DVG   PMVMIPTPS +H
Subjt:  GRHLQILHQMYKVPTPARGPRRRGCRQVDQDAPMELDDPVPEVIYYNVKDVLSFTQTQDDVGLSMPMVMIPTPSITH

A0A7J7DZM0 Protein SUPPRESSOR OF SILENCING 36.6e-1851.2Show/hide
Query:  FSPSPIDSFDKIFDGVPSGLEVQLGCSDEI-QLVGLKKWEAAGFTICSFGLVKCLLSWSLEVAIGLFDDPAAFDGGVWL---SDGPVRRCTTSRNVVVSV
        FS S +DSF+KI DGVP+GL  +    D + +L GLK  E  G TI SFGL+ CLLSWSLEV + +   P AF         SDGPV RCTTSR   VSV
Subjt:  FSPSPIDSFDKIFDGVPSGLEVQLGCSDEI-QLVGLKKWEAAGFTICSFGLVKCLLSWSLEVAIGLFDDPAAFDGGVWL---SDGPVRRCTTSRNVVVSV

Query:  WTNVVKGLQPTRLWLAAFSITMQLI
         T VVKGLQ    W+  FS+ +  I
Subjt:  WTNVVKGLQPTRLWLAAFSITMQLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCTGAAAGCATATTTTAGTGATATTGTTGTTAATATCTCTCTAAAAGCTCCGTTTCTTGTGGTGAATATTGATGGGAGACATCTTCAAATCCTTCATCAA
ATGTATAAAGTGCCTACTCCTGCTCGTGGCCCTAGGCGTAGAGGATGCCGTCAAGTAGACCAGGATGCCCCAATGGAGCTTGACGATCCTGTACCTGAAGTTATT
TATTATAACGTCAAGGACGTTCTATCGTTTACACAGACACAGGATGATGTTGGTCTGTCCATGCCTATGGTTATGATACCGACTCCTAGTATCACACACCACCTT
TGCCACCACAGTATAGTTATGGAGTCGGCCATGGACGTGGACGTCCACTCTAGTGTTCAGGTCGGAGCCGGAGACCGGGTTCGAGCTCGATATGTGAAGAACCGT
GGTGCAAATTCCTGCATAAACAATTCCTTCTCCCCGTCCCCGATCGACAGCTTCGACAAGATCTTCGACGGAGTACCGAGCGGGCTCGAAGTGCAGCTCGGATGC
TCCGATGAAATACAGCTAGTTGGCTTGAAGAAATGGGAAGCTGCTGGTTTCACAATTTGCAGCTTTGGTCTTGTCAAGTGCCTCCTTTCATGGAGCTTGGAGGTT
GCGATTGGCCTCTTTGATGATCCCGCCGCCTTCGATGGCGGTGTATGGCTCTCGGATGGCCCGGTCAGGCGCTGCACGACCTCTCGGAATGTGGTCGTGTCGGTC
TGGACGAATGTCGTCAAGGGTTTGCAACCAACAAGACTTTGGTTGGCTGCCTTCTCCATCACAATGCAGCTTATTTATTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGCTGAAAGCATATTTTAGTGATATTGTTGTTAATATCTCTCTAAAAGCTCCGTTTCTTGTGGTGAATATTGATGGGAGACATCTTCAAATCCTTCATCAA
ATGTATAAAGTGCCTACTCCTGCTCGTGGCCCTAGGCGTAGAGGATGCCGTCAAGTAGACCAGGATGCCCCAATGGAGCTTGACGATCCTGTACCTGAAGTTATT
TATTATAACGTCAAGGACGTTCTATCGTTTACACAGACACAGGATGATGTTGGTCTGTCCATGCCTATGGTTATGATACCGACTCCTAGTATCACACACCACCTT
TGCCACCACAGTATAGTTATGGAGTCGGCCATGGACGTGGACGTCCACTCTAGTGTTCAGGTCGGAGCCGGAGACCGGGTTCGAGCTCGATATGTGAAGAACCGT
GGTGCAAATTCCTGCATAAACAATTCCTTCTCCCCGTCCCCGATCGACAGCTTCGACAAGATCTTCGACGGAGTACCGAGCGGGCTCGAAGTGCAGCTCGGATGC
TCCGATGAAATACAGCTAGTTGGCTTGAAGAAATGGGAAGCTGCTGGTTTCACAATTTGCAGCTTTGGTCTTGTCAAGTGCCTCCTTTCATGGAGCTTGGAGGTT
GCGATTGGCCTCTTTGATGATCCCGCCGCCTTCGATGGCGGTGTATGGCTCTCGGATGGCCCGGTCAGGCGCTGCACGACCTCTCGGAATGTGGTCGTGTCGGTC
TGGACGAATGTCGTCAAGGGTTTGCAACCAACAAGACTTTGGTTGGCTGCCTTCTCCATCACAATGCAGCTTATTTATTCATAA
Protein sequenceShow/hide protein sequence
MSLKAYFSDIVVNISLKAPFLVVNIDGRHLQILHQMYKVPTPARGPRRRGCRQVDQDAPMELDDPVPEVIYYNVKDVLSFTQTQDDVGLSMPMVMIPTPSITHHL
CHHSIVMESAMDVDVHSSVQVGAGDRVRARYVKNRGANSCINNSFSPSPIDSFDKIFDGVPSGLEVQLGCSDEIQLVGLKKWEAAGFTICSFGLVKCLLSWSLEV
AIGLFDDPAAFDGGVWLSDGPVRRCTTSRNVVVSVWTNVVKGLQPTRLWLAAFSITMQLIYS