; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc01g02060 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g02060
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRNase H domain-containing protein
Genome locationchr1:1387953..1389654
RNA-Seq ExpressionMoc01g02060
SyntenyMoc01g02060
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131661.1 uncharacterized protein LOC111004786 [Momordica charantia]1.5e-2443.05Show/hide
Query:  LNTNFRFLDYWQNFITTLNSTERSLAAITCWSIWGDRNATLHGSVISPPEIKSDWISSYTQNFLQAMAQNLPMRHAQVTSSSPAPD-RYCTPSADYLKLN
        +N N  F+D W      LN  +R LAA T W+IW DRN+  HGS +S P ++ +WISSY QN+ QA       R +   SS P P  R+  P    +K+N
Subjt:  LNTNFRFLDYWQNFITTLNSTERSLAAITCWSIWGDRNATLHGSVISPPEIKSDWISSYTQNFLQAMAQNLPMRHAQVTSSSPAPD-RYCTPSADYLKLN

Query:  TDVACRNFSTGLGMVLQDSSGLVVVAMAENILQPFPPLLVEIWGILEACKI
        +D ACR+ STGLG++++D  G+++VA +  +  P  PL  EI GILEA K+
Subjt:  TDVACRNFSTGLGMVLQDSSGLVVVAMAENILQPFPPLLVEIWGILEACKI

XP_022131662.1 uncharacterized protein LOC111004787 [Momordica charantia]7.4e-2754.13Show/hide
Query:  LRDSSIRASSHFWKGLLWGRTLLLKGLRIRVGNGSSIEAFSDPWIPRPHTFQPIIVPMGFSDTRVTYFIISDGQWDVNSLSNFFCAEDRDLITSLPISLN
        L+ + +R  S+FWKG +WGR LL+KGLR RVGNGS+I  FSDPWIPRP++F+PI  P G  D +V   I  +GQWDV+ +S  FC EDRDLI S+P+S  
Subjt:  LRDSSIRASSHFWKGLLWGRTLLLKGLRIRVGNGSSIEAFSDPWIPRPHTFQPIIVPMGFSDTRVTYFIISDGQWDVNSLSNFFCAEDRDLITSLPISLN

Query:  TNFRFLDYW
          +  +D W
Subjt:  TNFRFLDYW

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.5e-4333.42Show/hide
Query:  LRDSSIRASSHFWKGLLWGRTLLLKGLRIRVGNGSSIEAFSDPWIPRPHTFQPIIVPMGFSDTRVTYFIISDGQWDVNSLSNFFCAEDRDLITSLPI---
        L+ S+   SS+FWKG LWGR LL+KGLR+RVGNGS+I+AFSDPW+PRP TF+P+    G  DT V  FI +DG WDV S+S+ FC EDRDLI S+PI   
Subjt:  LRDSSIRASSHFWKGLLWGRTLLLKGLRIRVGNGSSIEAFSDPWIPRPHTFQPIIVPMGFSDTRVTYFIISDGQWDVNSLSNFFCAEDRDLITSLPI---

Query:  ---------------------------------SLNTNFR------------------------------------------------------------
                                         S +TN+R                                                            
Subjt:  ---------------------------------SLNTNFR------------------------------------------------------------

Query:  --------------------------FLDYWQNFITTLNSTERSLAAITCWSIWGDRNATLHGSVISPPEIKSDWISSYTQNFLQAMAQNLPMRHAQVTS
                                  FL+ W +    L   + +LAAIT W IW DRN+ +HG  +SP E K +W++ +  +  QA   N   R    T 
Subjt:  --------------------------FLDYWQNFITTLNSTERSLAAITCWSIWGDRNATLHGSVISPPEIKSDWISSYTQNFLQAMAQNLPMRHAQVTS

Query:  SSPAP-DRYCTPSADY-LKLNTDVACRNFSTGLGMVLQDSSGLVVVAMAENILQPFPPLLVEIWGILEACK
        S+  P  +Y  PS+   LKLNTD ACR  ST  G +++DSS  +V A +  +  P  PLL EI  ILE  K
Subjt:  SSPAP-DRYCTPSADY-LKLNTDVACRNFSTGLGMVLQDSSGLVVVAMAENILQPFPPLLVEIWGILEACK

XP_030487365.1 uncharacterized protein LOC115704292 [Cannabis sativa]1.2e-1625.16Show/hide
Query:  CTLRDSSI-RASSHFWKGLLWGRTLLLKGLRIRVGNGSSIEAFSDPWIPRPHTFQPIIVPMGFSDTRVTYFIISDGQWDVNSLSNFFCAEDRDLITSLPI
        C+  D++I  + S  W+ + WG+ LLLKGLR ++G+G+ ++   DPWIP  + F+P+    G +   V+ FI +D  W+V  LS +F   D D I S+ +
Subjt:  CTLRDSSI-RASSHFWKGLLWGRTLLLKGLRIRVGNGSSIEAFSDPWIPRPHTFQPIIVPMGFSDTRVTYFIISDGQWDVNSLSNFFCAEDRDLITSLPI

Query:  S----------------------------------------LNTNFRFL------DYWQNFITTLNSTERSLAAITCWSIWGDRNATLHGSVISPPEIKS
        S                                           +FR        DY  +   T    E        W IW DRN  +HG +   P    
Subjt:  S----------------------------------------LNTNFRFL------DYWQNFITTLNSTERSLAAITCWSIWGDRNATLHGSVISPPEIKS

Query:  DWISSYTQNFLQAMAQNLPMRHAQVTS----SSPAP------DRYCTPSADYLKLNTDVA--CRNFSTGLGMVLQDSSGLVVVAMAENILQPFPPLLVEI
         + + + ++F +  +    +R   VTS    S P+P       ++  P  +  KLN D A        G+G +L+D +  VV A+++ +   F   ++E 
Subjt:  DWISSYTQNFLQAMAQNLPMRHAQVTS----SSPAP------DRYCTPSADYLKLNTDVA--CRNFSTGLGMVLQDSSGLVVVAMAENILQPFPPLLVEI

Query:  WGILEA
          +  A
Subjt:  WGILEA

XP_030505068.1 uncharacterized protein LOC115720043 [Cannabis sativa]9.0e-1723.35Show/hide
Query:  WKGLLWGRTLLLKGLRIRVGNGSSIEAFSDPWIPRPHTFQPIIVPMGFSDTRVTYFIISDGQWDVNSLSNFFCAEDRDLITSLPISLNTN----------
        W+G++WG+ LL+KGLR +VG+GS I   S+PW+P   TF+P++     +  +V+  I+    W+   L   F   D D I ++P++L+ +          
Subjt:  WKGLLWGRTLLLKGLRIRVGNGSSIEAFSDPWIPRPHTFQPIIVPMGFSDTRVTYFIISDGQWDVNSLSNFFCAEDRDLITSLPISLNTN----------

Query:  -------------------------------------------------------FRFLDYWQ---------------------NFITTLNSTERSLAAI
                                                                R    WQ                     +   T +S++    A 
Subjt:  -------------------------------------------------------FRFLDYWQ---------------------NFITTLNSTERSLAAI

Query:  TCWSIWGDRNATLHGSVISPPEIKSDWISSYTQNFLQA----MAQNLPMRHAQVTSSSPAPDRYCTPSADYLKLNTDVACRNFS--TGLGMVLQDSSGLV
          WSIW +RN  +HGS   P ++   +  SY   F  A       +L +R+   + S  +P  +  P +  LKLNTD A       +G G +LQ S+G +
Subjt:  TCWSIWGDRNATLHGSVISPPEIKSDWISSYTQNFLQA----MAQNLPMRHAQVTSSSPAPDRYCTPSADYLKLNTDVACRNFS--TGLGMVLQDSSGLV

Query:  VVAMAENILQPFPPLLVEIWGILEACKIHELLEI
        V  MA      F P ++E+  ++ + K  + L++
Subjt:  VVAMAENILQPFPPLLVEIWGILEACKIHELLEI

TrEMBL top hitse value%identityAlignment
A0A6J1BQ49 uncharacterized protein LOC1110047867.5e-2543.05Show/hide
Query:  LNTNFRFLDYWQNFITTLNSTERSLAAITCWSIWGDRNATLHGSVISPPEIKSDWISSYTQNFLQAMAQNLPMRHAQVTSSSPAPD-RYCTPSADYLKLN
        +N N  F+D W      LN  +R LAA T W+IW DRN+  HGS +S P ++ +WISSY QN+ QA       R +   SS P P  R+  P    +K+N
Subjt:  LNTNFRFLDYWQNFITTLNSTERSLAAITCWSIWGDRNATLHGSVISPPEIKSDWISSYTQNFLQAMAQNLPMRHAQVTSSSPAPD-RYCTPSADYLKLN

Query:  TDVACRNFSTGLGMVLQDSSGLVVVAMAENILQPFPPLLVEIWGILEACKI
        +D ACR+ STGLG++++D  G+++VA +  +  P  PL  EI GILEA K+
Subjt:  TDVACRNFSTGLGMVLQDSSGLVVVAMAENILQPFPPLLVEIWGILEACKI

A0A6J1BRN0 uncharacterized protein LOC1110047873.6e-2754.13Show/hide
Query:  LRDSSIRASSHFWKGLLWGRTLLLKGLRIRVGNGSSIEAFSDPWIPRPHTFQPIIVPMGFSDTRVTYFIISDGQWDVNSLSNFFCAEDRDLITSLPISLN
        L+ + +R  S+FWKG +WGR LL+KGLR RVGNGS+I  FSDPWIPRP++F+PI  P G  D +V   I  +GQWDV+ +S  FC EDRDLI S+P+S  
Subjt:  LRDSSIRASSHFWKGLLWGRTLLLKGLRIRVGNGSSIEAFSDPWIPRPHTFQPIIVPMGFSDTRVTYFIISDGQWDVNSLSNFFCAEDRDLITSLPISLN

Query:  TNFRFLDYW
          +  +D W
Subjt:  TNFRFLDYW

A0A6J1DX30 uncharacterized protein LOC1110248741.2e-4333.42Show/hide
Query:  LRDSSIRASSHFWKGLLWGRTLLLKGLRIRVGNGSSIEAFSDPWIPRPHTFQPIIVPMGFSDTRVTYFIISDGQWDVNSLSNFFCAEDRDLITSLPI---
        L+ S+   SS+FWKG LWGR LL+KGLR+RVGNGS+I+AFSDPW+PRP TF+P+    G  DT V  FI +DG WDV S+S+ FC EDRDLI S+PI   
Subjt:  LRDSSIRASSHFWKGLLWGRTLLLKGLRIRVGNGSSIEAFSDPWIPRPHTFQPIIVPMGFSDTRVTYFIISDGQWDVNSLSNFFCAEDRDLITSLPI---

Query:  ---------------------------------SLNTNFR------------------------------------------------------------
                                         S +TN+R                                                            
Subjt:  ---------------------------------SLNTNFR------------------------------------------------------------

Query:  --------------------------FLDYWQNFITTLNSTERSLAAITCWSIWGDRNATLHGSVISPPEIKSDWISSYTQNFLQAMAQNLPMRHAQVTS
                                  FL+ W +    L   + +LAAIT W IW DRN+ +HG  +SP E K +W++ +  +  QA   N   R    T 
Subjt:  --------------------------FLDYWQNFITTLNSTERSLAAITCWSIWGDRNATLHGSVISPPEIKSDWISSYTQNFLQAMAQNLPMRHAQVTS

Query:  SSPAP-DRYCTPSADY-LKLNTDVACRNFSTGLGMVLQDSSGLVVVAMAENILQPFPPLLVEIWGILEACK
        S+  P  +Y  PS+   LKLNTD ACR  ST  G +++DSS  +V A +  +  P  PLL EI  ILE  K
Subjt:  SSPAP-DRYCTPSADY-LKLNTDVACRNFSTGLGMVLQDSSGLVVVAMAENILQPFPPLLVEIWGILEACK

A0A803P614 Uncharacterized protein3.4e-1730.17Show/hide
Query:  WKGLLWGRTLLLKGLRIRVGNGSSIEAFSDPWIPRPHTFQPIIVPMGFSDTRVTYFIISDGQWDVNSLSNFFCAEDRDLITSLPISLNTN----FRFLDY
        W+G++WGR LLLKGLR ++G G  I   +DPWIP   TF P    +G +D  V++ I  +  W+V  L  +F   D D       + + +    F+    
Subjt:  WKGLLWGRTLLLKGLRIRVGNGSSIEAFSDPWIPRPHTFQPIIVPMGFSDTRVTYFIISDGQWDVNSLSNFFCAEDRDLITSLPISLNTN----FRFLDY

Query:  W---QNFITTLNSTERSLAAITCWSIWGDRNATLHGSVISPPEIKSDWISSYTQNFLQAMAQNLPMRHAQVTSSSPAPD------RYCTPSADYLKLNTD
        W    + +   N  ++       W    +RN  +HGS   P    + +  +Y  NF  A  +     H    S+SP P       ++  P+   LKLN D
Subjt:  W---QNFITTLNSTERSLAAITCWSIWGDRNATLHGSVISPPEIKSDWISSYTQNFLQAMAQNLPMRHAQVTSSSPAPD------RYCTPSADYLKLNTD

Query:  VAC---RNFSTGLGMVLQDSSGLVVVAMAENILQPFPPLLVE
         A    RN   G+G V+++S G V+ AMA+ I+  F   ++E
Subjt:  VAC---RNFSTGLGMVLQDSSGLVVVAMAENILQPFPPLLVE

A0A803PI64 Uncharacterized protein1.4e-1825.48Show/hide
Query:  SSHFWKGLLWGRTLLLKGLRIRVGNGSSIEAFSDPWIPRPHTFQPIIVPMGFSDTRVTYFIISDGQWDVNSLSNFFCAEDRDLITSLPIS----------
        +S  W+ L+WG+ L+LKG R RVGNG S+    DPW+PRP TF+    P    +  VT    +DGQWD + + + F   D +LI ++P S          
Subjt:  SSHFWKGLLWGRTLLLKGLRIRVGNGSSIEAFSDPWIPRPHTFQPIIVPMGFSDTRVTYFIISDGQWDVNSLSNFFCAEDRDLITSLPIS----------

Query:  ---------LNTNFRFLD---------------------------------YW------QNFITTLNSTERSLA---------------AITCWSIWGDR
                 + + +R                                    YW        F   L +   SL                 +  W++W  R
Subjt:  ---------LNTNFRFLD---------------------------------YW------QNFITTLNSTERSLA---------------AITCWSIWGDR

Query:  NATLHGSVISPPEIKSDWISSYTQNFLQAMAQNLPMRHAQVTSSSPAPDRYCTPS-ADYLKLNTDVACR--NFSTGLGMVLQDSSGLVVVAMAENILQPF
        N+ +HGS    PE   +W   Y   F               ++S+   +R   PS  D + +N D   +     +GLG V++DS+G V+ A A  + Q  
Subjt:  NATLHGSVISPPEIKSDWISSYTQNFLQAMAQNLPMRHAQVTSSSPAPDRYCTPS-ADYLKLNTDVACR--NFSTGLGMVLQDSSGLVVVAMAENILQPF

Query:  PPLLVEIWGI
        PPL + +  I
Subjt:  PPLLVEIWGI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCACTCTGAGAGATTCTTCTATCAGAGCATCATCGCATTTTTGGAAAGGGCTTTTGTGGGGAAGAACTCTTCTCCTTAAAGGCTTGCGAATTCGGGTTGGA
AATGGCTCATCTATTGAGGCTTTCTCCGATCCATGGATTCCAAGGCCTCACACCTTTCAGCCAATTATTGTTCCTATGGGGTTTAGTGATACTAGAGTGACATAT
TTCATTATTTCAGATGGACAATGGGATGTTAATTCTTTATCTAATTTCTTCTGTGCTGAGGACAGGGACCTTATTACCTCTTTGCCTATAAGCCTAAATACAAAT
TTCAGGTTTCTAGATTACTGGCAGAACTTCATCACGACTTTAAATTCGACAGAAAGAAGTCTGGCGGCCATTACCTGTTGGTCGATTTGGGGAGACCGAAATGCA
ACCCTTCATGGCTCAGTCATCTCGCCTCCAGAAATCAAATCTGACTGGATTAGCTCTTACACCCAAAATTTCCTTCAGGCAATGGCCCAGAACCTTCCTATGAGG
CATGCTCAAGTTACCTCTTCTTCACCGGCTCCAGATCGCTACTGCACCCCTTCAGCGGATTACTTGAAATTAAACACCGACGTTGCATGTAGAAACTTTTCTACC
GGGTTAGGGATGGTTCTTCAAGATTCAAGTGGGTTGGTGGTTGTAGCAATGGCAGAAAACATCCTGCAGCCCTTCCCTCCTCTTCTCGTTGAAATATGGGGTATT
CTTGAAGCTTGTAAGATCCACGAATTGCTTGAAATTAGAGGTAGAATCCAACTCTTTGATAGCAATCAGTTTGATTCAATGAGAGATGCAGACCAGAGGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCACTCTGAGAGATTCTTCTATCAGAGCATCATCGCATTTTTGGAAAGGGCTTTTGTGGGGAAGAACTCTTCTCCTTAAAGGCTTGCGAATTCGGGTTGGA
AATGGCTCATCTATTGAGGCTTTCTCCGATCCATGGATTCCAAGGCCTCACACCTTTCAGCCAATTATTGTTCCTATGGGGTTTAGTGATACTAGAGTGACATAT
TTCATTATTTCAGATGGACAATGGGATGTTAATTCTTTATCTAATTTCTTCTGTGCTGAGGACAGGGACCTTATTACCTCTTTGCCTATAAGCCTAAATACAAAT
TTCAGGTTTCTAGATTACTGGCAGAACTTCATCACGACTTTAAATTCGACAGAAAGAAGTCTGGCGGCCATTACCTGTTGGTCGATTTGGGGAGACCGAAATGCA
ACCCTTCATGGCTCAGTCATCTCGCCTCCAGAAATCAAATCTGACTGGATTAGCTCTTACACCCAAAATTTCCTTCAGGCAATGGCCCAGAACCTTCCTATGAGG
CATGCTCAAGTTACCTCTTCTTCACCGGCTCCAGATCGCTACTGCACCCCTTCAGCGGATTACTTGAAATTAAACACCGACGTTGCATGTAGAAACTTTTCTACC
GGGTTAGGGATGGTTCTTCAAGATTCAAGTGGGTTGGTGGTTGTAGCAATGGCAGAAAACATCCTGCAGCCCTTCCCTCCTCTTCTCGTTGAAATATGGGGTATT
CTTGAAGCTTGTAAGATCCACGAATTGCTTGAAATTAGAGGTAGAATCCAACTCTTTGATAGCAATCAGTTTGATTCAATGAGAGATGCAGACCAGAGGAGATGA
Protein sequenceShow/hide protein sequence
MCTLRDSSIRASSHFWKGLLWGRTLLLKGLRIRVGNGSSIEAFSDPWIPRPHTFQPIIVPMGFSDTRVTYFIISDGQWDVNSLSNFFCAEDRDLITSLPISLNTN
FRFLDYWQNFITTLNSTERSLAAITCWSIWGDRNATLHGSVISPPEIKSDWISSYTQNFLQAMAQNLPMRHAQVTSSSPAPDRYCTPSADYLKLNTDVACRNFST
GLGMVLQDSSGLVVVAMAENILQPFPPLLVEIWGILEACKIHELLEIRGRIQLFDSNQFDSMRDADQRR