; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc01g02140 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g02140
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr1:1415902..1420550
RNA-Seq ExpressionMoc01g02140
SyntenyMoc01g02140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147186.1 uncharacterized protein LOC111016198 [Momordica charantia]2.8e-5470.3Show/hide
Query:  MRVNDQQVTFSVFNSIKYPANVEEYSLLKIADDLMSDEIQTEELLSKLEDELTKILKAGDKEAKLIQGQSHEPESDRTYKKTFEPLELKDWVQAPLQPSI
        MRVNDQQVTF +FNSIK+PA++EE SLL++ADDL S+E+QTEELL +LE+E+TKI +  +KEAKLIQG+ +E  SDR YKK FE  ELKD  QA LQ S+
Subjt:  MRVNDQQVTFSVFNSIKYPANVEEYSLLKIADDLMSDEIQTEELLSKLEDELTKILKAGDKEAKLIQGQSHEPESDRTYKKTFEPLELKDWVQAPLQPSI

Query:  VKAPKLELKVLPSHLKYAYLGKAETLPVIIAADLAEEKEYQLIEMLGNNKKATDWTLADIKGINP
         KA KLELKVLP+HLKYAYLGKAETL + IAADLAE+KE++LIEML N+K+A DWT+ADIK INP
Subjt:  VKAPKLELKVLPSHLKYAYLGKAETLPVIIAADLAEEKEYQLIEMLGNNKKATDWTLADIKGINP

XP_022156989.1 uncharacterized protein LOC111023818 [Momordica charantia]1.4e-4566.06Show/hide
Query:  MRVNDQQVTFSVFNSIKYPANVEEYSLLKIADDLMSDEIQTEELLSKLEDELTKILKAGDKEAKLIQGQSHEPESDRTYKKTFEPLELKDWVQAPLQPSI
        +RVNDQQVT S+FNSIKYP +VEE S L+IADDLMSDEIQTEELL++LEDELT+I                                +KD VQAPLQPS+
Subjt:  MRVNDQQVTFSVFNSIKYPANVEEYSLLKIADDLMSDEIQTEELLSKLEDELTKILKAGDKEAKLIQGQSHEPESDRTYKKTFEPLELKDWVQAPLQPSI

Query:  VKAPKLELKVLPSHLKYAYLGKAETLPVIIAADLAEEKEYQLIEMLGNNKKATDWTLADIKGINP
        VKAPKLELKVLPSHLKYAYLG+ ETLPV IAADLAEEKE +LIEML N+KKA  WTLADIKGI+P
Subjt:  VKAPKLELKVLPSHLKYAYLGKAETLPVIIAADLAEEKEYQLIEMLGNNKKATDWTLADIKGINP

XP_030485610.1 uncharacterized protein LOC115702304 [Cannabis sativa]3.3e-2643.6Show/hide
Query:  MRVNDQQVTFSVFNSIKYPANVEEYSLLKIADDLMSDEI-----QTEELLSKLEDELTKILKAGDKEAKLIQGQSHEPESDRTYKKTFEPLELKDWVQAP
        MRVNDQ+VTF+VFN++++   +EE S L + D ++++       + E ++S LED L  + +  + +   ++     P+    +K++FE LELK+    P
Subjt:  MRVNDQQVTFSVFNSIKYPANVEEYSLLKIADDLMSDEI-----QTEELLSKLEDELTKILKAGDKEAKLIQGQSHEPESDRTYKKTFEPLELKDWVQAP

Query:  LQPSIVKAPKLELKVLPSHLKYAYLGKAETLPVIIAADLAEEKEYQLIEMLGNNKKATDWTLADIKGINPKL
         +PSI + PKLELK LPSHLKYAYLG+ E LP+II+A L  E E  L+E+L  +K+A  WT+ADIKGI+P +
Subjt:  LQPSIVKAPKLELKVLPSHLKYAYLGKAETLPVIIAADLAEEKEYQLIEMLGNNKKATDWTLADIKGINPKL

XP_030502183.1 uncharacterized protein LOC115717351 [Cannabis sativa]2.3e-2744.44Show/hide
Query:  MRVNDQQVTFSVFNSIKYPANVEEYSLLKIADDLMSDEIQTE----ELLSKLEDELTKILKAGDKEAKLIQGQSHEPESDRTYKKTFEPLELKDWVQAPL
        MRVNDQ+VTF+VFN++++P  +EE S + + D +++++   E    E      DEL  + +  D +   ++     P+    +KK FE LELK+    P 
Subjt:  MRVNDQQVTFSVFNSIKYPANVEEYSLLKIADDLMSDEIQTE----ELLSKLEDELTKILKAGDKEAKLIQGQSHEPESDRTYKKTFEPLELKDWVQAPL

Query:  QPSIVKAPKLELKVLPSHLKYAYLGKAETLPVIIAADLAEEKEYQLIEMLGNNKKATDWTLADIKGINPKL
        +PS  + PKLELK LPSHLKYAYLG+ +TLPVIIA++L  E E  L+E+L  +KKA  WT+ADI+GI+P +
Subjt:  QPSIVKAPKLELKVLPSHLKYAYLGKAETLPVIIAADLAEEKEYQLIEMLGNNKKATDWTLADIKGINPKL

XP_030504461.1 uncharacterized protein LOC115719521 [Cannabis sativa]1.7e-2745.35Show/hide
Query:  MRVNDQQVTFSVFNSIKYPANVEEYSLLKIADDLMSDEI-----QTEELLSKLEDELTKILKAGDKEAKLIQGQSHEPESDRTYKKTFEPLELKDWVQAP
        MRVNDQ+VTF+VFN++++P  +EE S L + D ++++       + E ++S LED L  + +  + +   ++     P+    +K+ FE LELK+    P
Subjt:  MRVNDQQVTFSVFNSIKYPANVEEYSLLKIADDLMSDEI-----QTEELLSKLEDELTKILKAGDKEAKLIQGQSHEPESDRTYKKTFEPLELKDWVQAP

Query:  LQPSIVKAPKLELKVLPSHLKYAYLGKAETLPVIIAADLAEEKEYQLIEMLGNNKKATDWTLADIKGINPKL
        L+PSI + PKLELK LPSHLKYAYLG+ ETLPVII+A L  E E  L+E+L  +K+A  WT+ADIK I+P +
Subjt:  LQPSIVKAPKLELKVLPSHLKYAYLGKAETLPVIIAADLAEEKEYQLIEMLGNNKKATDWTLADIKGINPKL

TrEMBL top hitse value%identityAlignment
A0A2G9HW58 DNA-directed DNA polymerase3.8e-2039.64Show/hide
Query:  MRVNDQQVTFSVFNSIKYPANVEEYSLLKIADDLMSDEIQTEELLSKLEDELTKILKAGDKEAKLIQGQSHEPESDRTYKKTFEPLELKDWVQAP----L
        MRV DQQ+ F+VF ++K+P   +E   + + D+L+ +E   E+ L  LE  L  +L   +KE        HE        K F+   ++   +      L
Subjt:  MRVNDQQVTFSVFNSIKYPANVEEYSLLKIADDLMSDEIQTEELLSKLEDELTKILKAGDKEAKLIQGQSHEPESDRTYKKTFEPLELKDWVQAP----L

Query:  QPSIVKAPKLELKVLPSHLKYAYLGKAETLPVIIAADLAEEKEYQLIEMLGNNKKATDWTLADIKGINP
        +PSI + P LELK LPSHL YAYLG+++TLPVII++ L++ +  +L+ +LGN+K A  WT+ DIKGI+P
Subjt:  QPSIVKAPKLELKVLPSHLKYAYLGKAETLPVIIAADLAEEKEYQLIEMLGNNKKATDWTLADIKGINP

A0A4Y1QSK5 Reverse transcriptase6.4e-2037.43Show/hide
Query:  MRVNDQQVTFSVFNSIKYPANVEEYSLLKIADDLMSDEIQTEELLSKLEDELTKILKAGDKEAKLIQG----QSHEPESDRTYKKTFEPLELKDWVQAPL
        +RV +++ TF VF +IK+P   E+   +++ D++ SD  + E     LE  L     + D    + +      + +P   R  +  FEPL       A  
Subjt:  MRVNDQQVTFSVFNSIKYPANVEEYSLLKIADDLMSDEIQTEELLSKLEDELTKILKAGDKEAKLIQG----QSHEPESDRTYKKTFEPLELKDWVQAPL

Query:  QPSIVKAPKLELKVLPSHLKYAYLGKAETLPVIIAADLAEEKEYQLIEMLGNNKKATDWTLADIKGINPKL
         PS++ AP L LK LP+HL+YAYLG +ETLPVIIAA+L+E +E +++ +L  +K A  WT+ DIKGI+P +
Subjt:  QPSIVKAPKLELKVLPSHLKYAYLGKAETLPVIIAADLAEEKEYQLIEMLGNNKKATDWTLADIKGINPKL

A0A6J1D1L0 uncharacterized protein LOC1110161981.4e-5470.3Show/hide
Query:  MRVNDQQVTFSVFNSIKYPANVEEYSLLKIADDLMSDEIQTEELLSKLEDELTKILKAGDKEAKLIQGQSHEPESDRTYKKTFEPLELKDWVQAPLQPSI
        MRVNDQQVTF +FNSIK+PA++EE SLL++ADDL S+E+QTEELL +LE+E+TKI +  +KEAKLIQG+ +E  SDR YKK FE  ELKD  QA LQ S+
Subjt:  MRVNDQQVTFSVFNSIKYPANVEEYSLLKIADDLMSDEIQTEELLSKLEDELTKILKAGDKEAKLIQGQSHEPESDRTYKKTFEPLELKDWVQAPLQPSI

Query:  VKAPKLELKVLPSHLKYAYLGKAETLPVIIAADLAEEKEYQLIEMLGNNKKATDWTLADIKGINP
         KA KLELKVLP+HLKYAYLGKAETL + IAADLAE+KE++LIEML N+K+A DWT+ADIK INP
Subjt:  VKAPKLELKVLPSHLKYAYLGKAETLPVIIAADLAEEKEYQLIEMLGNNKKATDWTLADIKGINP

A0A6J1DV77 uncharacterized protein LOC1110238186.8e-4666.06Show/hide
Query:  MRVNDQQVTFSVFNSIKYPANVEEYSLLKIADDLMSDEIQTEELLSKLEDELTKILKAGDKEAKLIQGQSHEPESDRTYKKTFEPLELKDWVQAPLQPSI
        +RVNDQQVT S+FNSIKYP +VEE S L+IADDLMSDEIQTEELL++LEDELT+I                                +KD VQAPLQPS+
Subjt:  MRVNDQQVTFSVFNSIKYPANVEEYSLLKIADDLMSDEIQTEELLSKLEDELTKILKAGDKEAKLIQGQSHEPESDRTYKKTFEPLELKDWVQAPLQPSI

Query:  VKAPKLELKVLPSHLKYAYLGKAETLPVIIAADLAEEKEYQLIEMLGNNKKATDWTLADIKGINP
        VKAPKLELKVLPSHLKYAYLG+ ETLPV IAADLAEEKE +LIEML N+KKA  WTLADIKGI+P
Subjt:  VKAPKLELKVLPSHLKYAYLGKAETLPVIIAADLAEEKEYQLIEMLGNNKKATDWTLADIKGINP

A0A6P5TZ80 uncharacterized protein LOC1107721665.8e-2141.76Show/hide
Query:  MRVNDQQVTFSVFNSIKYPANVEEYSLLKIADDLMSDEIQ---TEELLSKLEDELTKILKAGDKEAKLIQGQSHEPESDRTYKKTFEPLELKDWVQAPLQ
        +RV DQ V FS+F   K PA+V++   + + D LM  EI    T + L K+   L     A ++  + +      P     ++  FE L      + PLQ
Subjt:  MRVNDQQVTFSVFNSIKYPANVEEYSLLKIADDLMSDEIQ---TEELLSKLEDELTKILKAGDKEAKLIQGQSHEPESDRTYKKTFEPLELKDWVQAPLQ

Query:  PSIVKAPKLELKVLPSHLKYAYLGKAETLPVIIAADLAEEKEYQLIEMLGNNKKATDWTLADIKGINPKL
        PS V+ PKL+LKVLP HLKYAYLG   +LPVIIAADL+  +E +L+ +L N + A  WT+ADIKGI+P +
Subjt:  PSIVKAPKLELKVLPSHLKYAYLGKAETLPVIIAADLAEEKEYQLIEMLGNNKKATDWTLADIKGINPKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGTCAATGACCAGCAAGTGACATTCTCTGTTTTTAACTCCATTAAATACCCTGCTAATGTGGAAGAATATTCTTTGTTAAAGATTGCAGATGATTTGATG
AGTGATGAAATACAAACGGAAGAGCTGTTGAGCAAACTGGAGGACGAGCTAACAAAAATTCTCAAGGCAGGAGACAAGGAAGCCAAGTTGATCCAAGGCCAGTCG
CATGAACCTGAATCCGATAGAACCTATAAGAAGACATTCGAGCCGCTGGAATTGAAGGACTGGGTGCAAGCACCGCTGCAGCCATCTATTGTGAAAGCACCCAAG
TTAGAGCTGAAGGTCTTACCTTCACACCTCAAGTATGCTTATCTGGGAAAAGCAGAAACACTGCCAGTCATCATCGCAGCAGACTTAGCCGAAGAAAAAGAGTAT
CAGTTAATAGAGATGTTGGGAAATAACAAGAAGGCCACTGACTGGACTTTAGCTGATATAAAAGGGATTAATCCAAAGCTAGAGGGAGTAGTGAAAGGACAACAA
GCAGCAATCAAAGACGCATTTCCTGATAAGCAGTTGCTGGTGGTGGCAGAACAGAGAAAAGACTTGGAGCCATGGTCGCCTGCAGCATTGACAAACCGTCAGCCT
CGTCATCCAATTATGCCTCGAGTTAAAGCGAAAGCAAGGGAAGGTAAGAAAGCCATTCCCCCTCAAGAACTGACACCATCTCCTTCACCGGAAAAGACGTCAGAG
CCGGCTCAAGCGAAAGCCCCACCCCAACCCAACCCGTTACCCGAAAACACAGCCCCAGAAAGAGAAACCTCTTCCCAGCCTAAAAAGAAACCCGCTGCCAAGAGG
GGTAAGAGAGCCGCGAAGGGAAAGAAGCAGCCGCCTGTTCCAGTCGAAGAAGAAGAGCAGCTGGCTCAAGACAGCCAAACCAAAGCAGTCGGTCAGAATGATGAG
CACGAAGAACTCGTCCAAGCGGACAGTAGCAAAGAGCAAGCGGGCAGTGGTGAGGATAACCTGGGAGAAGGTGGCGCAACCGCAAAGGCAGCCAGAGAAGGAGAA
GCTCTGTCTGACAAAGAGCAAGAAGAAATAAAAGAAGAGGTAGAAGCAGCTCCGGTGCCCGTTAGAAAATCACAAAGAAAGAGAAAGCTTTCCCCAATTGCTGAG
CCCGAAAAAGGGAAGAGGCCCAAGCAGAAGGTAGACATGCAAGCTAAAAAAAAAGGAGAGGAGAAGGTTACTGCAGAGCCCACAGAATTTCTGCGATTTGGCGAT
GCTGCAGCATCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGTCAATGACCAGCAAGTGACATTCTCTGTTTTTAACTCCATTAAATACCCTGCTAATGTGGAAGAATATTCTTTGTTAAAGATTGCAGATGATTTGATG
AGTGATGAAATACAAACGGAAGAGCTGTTGAGCAAACTGGAGGACGAGCTAACAAAAATTCTCAAGGCAGGAGACAAGGAAGCCAAGTTGATCCAAGGCCAGTCG
CATGAACCTGAATCCGATAGAACCTATAAGAAGACATTCGAGCCGCTGGAATTGAAGGACTGGGTGCAAGCACCGCTGCAGCCATCTATTGTGAAAGCACCCAAG
TTAGAGCTGAAGGTCTTACCTTCACACCTCAAGTATGCTTATCTGGGAAAAGCAGAAACACTGCCAGTCATCATCGCAGCAGACTTAGCCGAAGAAAAAGAGTAT
CAGTTAATAGAGATGTTGGGAAATAACAAGAAGGCCACTGACTGGACTTTAGCTGATATAAAAGGGATTAATCCAAAGCTAGAGGGAGTAGTGAAAGGACAACAA
GCAGCAATCAAAGACGCATTTCCTGATAAGCAGTTGCTGGTGGTGGCAGAACAGAGAAAAGACTTGGAGCCATGGTCGCCTGCAGCATTGACAAACCGTCAGCCT
CGTCATCCAATTATGCCTCGAGTTAAAGCGAAAGCAAGGGAAGGTAAGAAAGCCATTCCCCCTCAAGAACTGACACCATCTCCTTCACCGGAAAAGACGTCAGAG
CCGGCTCAAGCGAAAGCCCCACCCCAACCCAACCCGTTACCCGAAAACACAGCCCCAGAAAGAGAAACCTCTTCCCAGCCTAAAAAGAAACCCGCTGCCAAGAGG
GGTAAGAGAGCCGCGAAGGGAAAGAAGCAGCCGCCTGTTCCAGTCGAAGAAGAAGAGCAGCTGGCTCAAGACAGCCAAACCAAAGCAGTCGGTCAGAATGATGAG
CACGAAGAACTCGTCCAAGCGGACAGTAGCAAAGAGCAAGCGGGCAGTGGTGAGGATAACCTGGGAGAAGGTGGCGCAACCGCAAAGGCAGCCAGAGAAGGAGAA
GCTCTGTCTGACAAAGAGCAAGAAGAAATAAAAGAAGAGGTAGAAGCAGCTCCGGTGCCCGTTAGAAAATCACAAAGAAAGAGAAAGCTTTCCCCAATTGCTGAG
CCCGAAAAAGGGAAGAGGCCCAAGCAGAAGGTAGACATGCAAGCTAAAAAAAAAGGAGAGGAGAAGGTTACTGCAGAGCCCACAGAATTTCTGCGATTTGGCGAT
GCTGCAGCATCATAA
Protein sequenceShow/hide protein sequence
MRVNDQQVTFSVFNSIKYPANVEEYSLLKIADDLMSDEIQTEELLSKLEDELTKILKAGDKEAKLIQGQSHEPESDRTYKKTFEPLELKDWVQAPLQPSIVKAPK
LELKVLPSHLKYAYLGKAETLPVIIAADLAEEKEYQLIEMLGNNKKATDWTLADIKGINPKLEGVVKGQQAAIKDAFPDKQLLVVAEQRKDLEPWSPAALTNRQP
RHPIMPRVKAKAREGKKAIPPQELTPSPSPEKTSEPAQAKAPPQPNPLPENTAPERETSSQPKKKPAAKRGKRAAKGKKQPPVPVEEEEQLAQDSQTKAVGQNDE
HEELVQADSSKEQAGSGEDNLGEGGATAKAAREGEALSDKEQEEIKEEVEAAPVPVRKSQRKRKLSPIAEPEKGKRPKQKVDMQAKKKGEEKVTAEPTEFLRFGD
AAAS