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Moc01g03610 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g03610
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr1:2318838..2325189
RNA-Seq ExpressionMoc01g03610
SyntenyMoc01g03610
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]3.5e-2473.86Show/hide
Query:  ELARSLVTQFVEGRNRYRHIAYLLTIKQKAIESLKDDVAWFNEEKLQLEGLTDAVALIAFVFGVKDEQLVFSFGKKTLSTFSQAFSRA
        ELAR+ VTQF  G NR R +AYLLTIKQKA ESLKD VA FN+EKLQ+EGLTDAV L+ F+ GVKDEQLVFSFGK+T  TFS+A SRA
Subjt:  ELARSLVTQFVEGRNRYRHIAYLLTIKQKAIESLKDDVAWFNEEKLQLEGLTDAVALIAFVFGVKDEQLVFSFGKKTLSTFSQAFSRA

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]1.6e-2167.82Show/hide
Query:  LARSLVTQFVEGRNRYRHIAYLLTIKQKAIESLKDDVAWFNEEKLQLEGLTDAVALIAFVFGVKDEQLVFSFGKKTLSTFSQAFSRA
        LA++ VTQF+ GR+R R +AYLLTIKQ+A ESL D VA FNEEKLQ+EGLT+AV+L+AF+  ++DE L FSFGKKT STFS+A SRA
Subjt:  LARSLVTQFVEGRNRYRHIAYLLTIKQKAIESLKDDVAWFNEEKLQLEGLTDAVALIAFVFGVKDEQLVFSFGKKTLSTFSQAFSRA

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]2.9e-2372.73Show/hide
Query:  ELARSLVTQFVEGRNRYRHIAYLLTIKQKAIESLKDDVAWFNEEKLQLEGLTDAVALIAFVFGVKDEQLVFSFGKKTLSTFSQAFSRA
        ELA + VTQFV GR + + + YLLTIKQKA ESLK+ VA FNEEKLQ+EGLTDAVALIAFV GVKDE+LVFSFGK+T  TF +A SRA
Subjt:  ELARSLVTQFVEGRNRYRHIAYLLTIKQKAIESLKDDVAWFNEEKLQLEGLTDAVALIAFVFGVKDEQLVFSFGKKTLSTFSQAFSRA

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.5e-2270.11Show/hide
Query:  LARSLVTQFVEGRNRYRHIAYLLTIKQKAIESLKDDVAWFNEEKLQLEGLTDAVALIAFVFGVKDEQLVFSFGKKTLSTFSQAFSRA
        LAR+ VTQFV GR R R +AYLLTIKQ+  ESL+D VA FNEEKLQ+EGLTDAV+L+AF+ GV+DE L FSFGK+T +TFS+A SRA
Subjt:  LARSLVTQFVEGRNRYRHIAYLLTIKQKAIESLKDDVAWFNEEKLQLEGLTDAVALIAFVFGVKDEQLVFSFGKKTLSTFSQAFSRA

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]2.1e-2170.11Show/hide
Query:  LARSLVTQFVEGRNRYRHIAYLLTIKQKAIESLKDDVAWFNEEKLQLEGLTDAVALIAFVFGVKDEQLVFSFGKKTLSTFSQAFSRA
        LAR+ +TQFV GR R R +AYLLTIKQ+  ESL D VA FNEEKLQLEGLTDAV+L+AF+ GV+DE L FSF K+T STFS+A SRA
Subjt:  LARSLVTQFVEGRNRYRHIAYLLTIKQKAIESLKDDVAWFNEEKLQLEGLTDAVALIAFVFGVKDEQLVFSFGKKTLSTFSQAFSRA

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166191.7e-2473.86Show/hide
Query:  ELARSLVTQFVEGRNRYRHIAYLLTIKQKAIESLKDDVAWFNEEKLQLEGLTDAVALIAFVFGVKDEQLVFSFGKKTLSTFSQAFSRA
        ELAR+ VTQF  G NR R +AYLLTIKQKA ESLKD VA FN+EKLQ+EGLTDAV L+ F+ GVKDEQLVFSFGK+T  TFS+A SRA
Subjt:  ELARSLVTQFVEGRNRYRHIAYLLTIKQKAIESLKDDVAWFNEEKLQLEGLTDAVALIAFVFGVKDEQLVFSFGKKTLSTFSQAFSRA

A0A6J1D7D2 uncharacterized protein LOC1110183077.8e-2267.82Show/hide
Query:  LARSLVTQFVEGRNRYRHIAYLLTIKQKAIESLKDDVAWFNEEKLQLEGLTDAVALIAFVFGVKDEQLVFSFGKKTLSTFSQAFSRA
        LA++ VTQF+ GR+R R +AYLLTIKQ+A ESL D VA FNEEKLQ+EGLT+AV+L+AF+  ++DE L FSFGKKT STFS+A SRA
Subjt:  LARSLVTQFVEGRNRYRHIAYLLTIKQKAIESLKDDVAWFNEEKLQLEGLTDAVALIAFVFGVKDEQLVFSFGKKTLSTFSQAFSRA

A0A6J1DWY0 uncharacterized protein LOC1110252931.2e-2270.11Show/hide
Query:  LARSLVTQFVEGRNRYRHIAYLLTIKQKAIESLKDDVAWFNEEKLQLEGLTDAVALIAFVFGVKDEQLVFSFGKKTLSTFSQAFSRA
        LAR+ VTQFV GR R R +AYLLTIKQ+  ESL+D VA FNEEKLQ+EGLTDAV+L+AF+ GV+DE L FSFGK+T +TFS+A SRA
Subjt:  LARSLVTQFVEGRNRYRHIAYLLTIKQKAIESLKDDVAWFNEEKLQLEGLTDAVALIAFVFGVKDEQLVFSFGKKTLSTFSQAFSRA

A0A6J1DZ49 uncharacterized protein LOC1110248511.4e-2372.73Show/hide
Query:  ELARSLVTQFVEGRNRYRHIAYLLTIKQKAIESLKDDVAWFNEEKLQLEGLTDAVALIAFVFGVKDEQLVFSFGKKTLSTFSQAFSRA
        ELA + VTQFV GR + + + YLLTIKQKA ESLK+ VA FNEEKLQ+EGLTDAVALIAFV GVKDE+LVFSFGK+T  TF +A SRA
Subjt:  ELARSLVTQFVEGRNRYRHIAYLLTIKQKAIESLKDDVAWFNEEKLQLEGLTDAVALIAFVFGVKDEQLVFSFGKKTLSTFSQAFSRA

A0A6J1E1E7 uncharacterized protein LOC1110255481.0e-2170.11Show/hide
Query:  LARSLVTQFVEGRNRYRHIAYLLTIKQKAIESLKDDVAWFNEEKLQLEGLTDAVALIAFVFGVKDEQLVFSFGKKTLSTFSQAFSRA
        LAR+ +TQFV GR R R +AYLLTIKQ+  ESL D VA FNEEKLQLEGLTDAV+L+AF+ GV+DE L FSF K+T STFS+A SRA
Subjt:  LARSLVTQFVEGRNRYRHIAYLLTIKQKAIESLKDDVAWFNEEKLQLEGLTDAVALIAFVFGVKDEQLVFSFGKKTLSTFSQAFSRA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGAAGAAGTTGGGGAGACAACCAGTCATGCACGGAGCAAGCTGAAGATAAGAGGAAACGACAAACCTCGAGCCAACGTTTGGCCGGATTCGAATTCCACAATCCC
TAGAGGGATCATGATTCAACTTGAGCCTGTGTGGAAAGAGCCATACCGGTCTTTAATGCTGTTCGATTTTGTGGGTCTCGTCGATCCCTTTATTCTAGAAGATTTGTGTG
AATTTGGCGGAATCCCAAAAGGCCAAATTTTTACATCAACAGAGCCTATAGTCCGATATGACCAAAGGACTTCTGGCAGCTCCTCTGCCTATTTGCCTTTGCAATCTTTG
AGCTTCAAAATGCCAAAGGATCAGACGATGTTGGTCCAGATGAAGTTCGTGACCTTGGCTTTTATCACAGTTGCAAGTGGCTCGACTTCTGCTTACCTGCGAAGAGCCAA
GGGCTGGAAATGGTGCAAGATTCACCGAGCTACTGAAGATCGGCCAAGTGACAACGACGACGAGCTAGCAAGGTGCCGCAACATTCTGGTGAAGAGTGCCACCCTTGGAG
AAGAGTTAATGGGGATACAGCTTTACCTGAGACAGCCGAAGGAGAAACCAGCCGACCAGTTCTCGGATAGAAGGATAAGCCGATCAAAGGTCTTCGGCTGGTTAGGCCAA
CAAGCATTTGTACGACAACAGAAGTTTATCGTGCCCAGTGGAAGTAGAAACTACCCAATTGACCGAGCCGACATCGGGCGGACTACTATCGACAAAAGAAGGCGACCTGG
GGGAACCGAGCTATTTGAGATACAGTCAGGAAGGCACAAAGACGATAAGTTCGACCTTGAGAAACTGGAATTGGCGAGATCACTTGTCACCCAATTTGTCGAAGGACGGA
ATAGATACAGGCATATAGCATACCTGCTGACTATCAAGCAAAAGGCGATAGAGAGCCTCAAAGACGATGTGGCTTGGTTCAACGAAGAAAAGCTACAATTGGAAGGTCTG
ACAGATGCGGTAGCATTGATAGCCTTTGTATTCGGTGTGAAGGACGAGCAATTGGTGTTCTCTTTCGGGAAGAAAACTTTGAGCACTTTCTCGCAAGCTTTTAGCCGAGC
CTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTGAAGAAGTTGGGGAGACAACCAGTCATGCACGGAGCAAGCTGAAGATAAGAGGAAACGACAAACCTCGAGCCAACGTTTGGCCGGATTCGAATTCCACAATCCC
TAGAGGGATCATGATTCAACTTGAGCCTGTGTGGAAAGAGCCATACCGGTCTTTAATGCTGTTCGATTTTGTGGGTCTCGTCGATCCCTTTATTCTAGAAGATTTGTGTG
AATTTGGCGGAATCCCAAAAGGCCAAATTTTTACATCAACAGAGCCTATAGTCCGATATGACCAAAGGACTTCTGGCAGCTCCTCTGCCTATTTGCCTTTGCAATCTTTG
AGCTTCAAAATGCCAAAGGATCAGACGATGTTGGTCCAGATGAAGTTCGTGACCTTGGCTTTTATCACAGTTGCAAGTGGCTCGACTTCTGCTTACCTGCGAAGAGCCAA
GGGCTGGAAATGGTGCAAGATTCACCGAGCTACTGAAGATCGGCCAAGTGACAACGACGACGAGCTAGCAAGGTGCCGCAACATTCTGGTGAAGAGTGCCACCCTTGGAG
AAGAGTTAATGGGGATACAGCTTTACCTGAGACAGCCGAAGGAGAAACCAGCCGACCAGTTCTCGGATAGAAGGATAAGCCGATCAAAGGTCTTCGGCTGGTTAGGCCAA
CAAGCATTTGTACGACAACAGAAGTTTATCGTGCCCAGTGGAAGTAGAAACTACCCAATTGACCGAGCCGACATCGGGCGGACTACTATCGACAAAAGAAGGCGACCTGG
GGGAACCGAGCTATTTGAGATACAGTCAGGAAGGCACAAAGACGATAAGTTCGACCTTGAGAAACTGGAATTGGCGAGATCACTTGTCACCCAATTTGTCGAAGGACGGA
ATAGATACAGGCATATAGCATACCTGCTGACTATCAAGCAAAAGGCGATAGAGAGCCTCAAAGACGATGTGGCTTGGTTCAACGAAGAAAAGCTACAATTGGAAGGTCTG
ACAGATGCGGTAGCATTGATAGCCTTTGTATTCGGTGTGAAGGACGAGCAATTGGTGTTCTCTTTCGGGAAGAAAACTTTGAGCACTTTCTCGCAAGCTTTTAGCCGAGC
CTAG
Protein sequenceShow/hide protein sequence
MIEEVGETTSHARSKLKIRGNDKPRANVWPDSNSTIPRGIMIQLEPVWKEPYRSLMLFDFVGLVDPFILEDLCEFGGIPKGQIFTSTEPIVRYDQRTSGSSSAYLPLQSL
SFKMPKDQTMLVQMKFVTLAFITVASGSTSAYLRRAKGWKWCKIHRATEDRPSDNDDELARCRNILVKSATLGEELMGIQLYLRQPKEKPADQFSDRRISRSKVFGWLGQ
QAFVRQQKFIVPSGSRNYPIDRADIGRTTIDKRRRPGGTELFEIQSGRHKDDKFDLEKLELARSLVTQFVEGRNRYRHIAYLLTIKQKAIESLKDDVAWFNEEKLQLEGL
TDAVALIAFVFGVKDEQLVFSFGKKTLSTFSQAFSRA