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Moc01g03670 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g03670
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr1:2358016..2358592
RNA-Seq ExpressionMoc01g03670
SyntenyMoc01g03670
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156326.1 uncharacterized protein LOC111023247 [Momordica charantia]2.6e-4859.88Show/hide
Query:  MSPRRSMRIRANVNPALEGENVVNPPTPPVEVLQALISNTAGNGGAQVQQPQHVQSPKDEAKFINDFKRYGPPTFDGGSEKTTATNEWVRELEALYLYLG
        M PR SMR+RA+ +PA                         G GG Q   PQH+ +P+ EA+FI DFKRYGPPTFDG SE+ TA  EW+RELEALY YLG
Subjt:  MSPRRSMRIRANVNPALEGENVVNPPTPPVEVLQALISNTAGNGGAQVQQPQHVQSPKDEAKFINDFKRYGPPTFDGGSEKTTATNEWVRELEALYLYLG

Query:  CNDPFKVKSAVFMLRGEALNWWDSVATAEDHANVHITWARFKDLLYDYYFSKSLKDAKEVEF
        C D FKVK AVFMLRGEALNWWDSVA AED+ANV I WARFK+LLYDYY+ +++KD KE EF
Subjt:  CNDPFKVKSAVFMLRGEALNWWDSVATAEDHANVHITWARFKDLLYDYYFSKSLKDAKEVEF

XP_022156546.1 uncharacterized protein LOC111023424 [Momordica charantia]3.1e-5763.07Show/hide
Query:  MSPRRSMRIRANVNPALEGENVVNPPTPPV--------------EVLQALISNTAGNGGAQVQQPQHVQSPKDEAKFINDFKRYGPPTFDGGSEKTTATN
        M PRRSMR+RA+V+PA  GENV +PP PP+                  ALI+NTAG GGAQ Q P+H+ +P+ EA+FI DFKRYGPPTF GGSE+ T   
Subjt:  MSPRRSMRIRANVNPALEGENVVNPPTPPV--------------EVLQALISNTAGNGGAQVQQPQHVQSPKDEAKFINDFKRYGPPTFDGGSEKTTATN

Query:  EWVRELEALYLYLGCNDPFKVKSAVFMLRGEALNWWDSVATAEDHANVHITWARFKDLLYDYYFSKSLKDAKEVEF
        EWVRELEALY YLGC D FKVK AVFMLR EALNWWDSVA  EDHANV + WARFK+LLYD+Y+ ++++D KEVEF
Subjt:  EWVRELEALYLYLGCNDPFKVKSAVFMLRGEALNWWDSVATAEDHANVHITWARFKDLLYDYYFSKSLKDAKEVEF

XP_022157413.1 uncharacterized protein LOC111024114 [Momordica charantia]3.4e-4863.51Show/hide
Query:  ALEGENVVNPPTPPV-EVLQALISNTAGNGGAQVQQPQHVQSPKDEAKFINDFKRYGPPTFDGGSEKTTATNEWVRELEALYLYLGCNDPFKVKSAVFML
        A +G   VNP    + E LQ L+ N  G GGAQVQQP+  Q P+DE +FI DFKR+GPP F+G SE+ TAT EWVRELEALY+YLGC+D FKV+ AVFML
Subjt:  ALEGENVVNPPTPPV-EVLQALISNTAGNGGAQVQQPQHVQSPKDEAKFINDFKRYGPPTFDGGSEKTTATNEWVRELEALYLYLGCNDPFKVKSAVFML

Query:  RGEALNWWDSVATAEDHANVHITWARFKDLLYDYYFSKSLKDAKEVEF
        RGEA+NWW+SVA AEDH NV +TWARFKDLLY+YYF  ++++ K  EF
Subjt:  RGEALNWWDSVATAEDHANVHITWARFKDLLYDYYFSKSLKDAKEVEF

XP_022158637.1 uncharacterized protein LOC111025088 [Momordica charantia]1.1e-5170.21Show/hide
Query:  VNPPTPPV-EVLQALISNTAGNGGAQVQQPQHVQSPKDEAKFINDFKRYGPPTFDGGSEKTTATNEWVRELEALYLYLGCNDPFKVKSAVFMLRGEALNW
        VNP    + E LQALI+NTAG GGAQ   P+H  +P+ EA+FI DFKRYGPPTFDGGSE+ TA   WVRELEALY YLGC D FKVK  VFMLRGEALNW
Subjt:  VNPPTPPV-EVLQALISNTAGNGGAQVQQPQHVQSPKDEAKFINDFKRYGPPTFDGGSEKTTATNEWVRELEALYLYLGCNDPFKVKSAVFMLRGEALNW

Query:  WDSVATAEDHANVHITWARFKDLLYDYYFSKSLKDAKEVEF
        WDS+A AEDHANV + WARFKDLLYDYY+ +++KD KE EF
Subjt:  WDSVATAEDHANVHITWARFKDLLYDYYFSKSLKDAKEVEF

XP_022159307.1 uncharacterized protein LOC111025716, partial [Momordica charantia]1.5e-5175Show/hide
Query:  ALISNTAGNGGAQVQQPQHVQSPKDEAKFINDFKRYGPPTFDGGSEKTTATNEWVRELEALYLYLGCNDPFKVKSAVFMLRGEALNWWDSVATAEDHANV
        AL++NTAG GGAQ Q P+H  +P+ EA+FI DFKRYGPPTFDGGSEK TA  EWVRELEALY+YLGC D FK K AVFMLRGEALNWWDSV  AEDHANV
Subjt:  ALISNTAGNGGAQVQQPQHVQSPKDEAKFINDFKRYGPPTFDGGSEKTTATNEWVRELEALYLYLGCNDPFKVKSAVFMLRGEALNWWDSVATAEDHANV

Query:  HITWARFKDLLYDYYFSKSLKDAKEVEF
          TWARFKDLLYDYY+ +++KD KE EF
Subjt:  HITWARFKDLLYDYYFSKSLKDAKEVEF

TrEMBL top hitse value%identityAlignment
A0A6J1DTA8 uncharacterized protein LOC1110241141.7e-4863.51Show/hide
Query:  ALEGENVVNPPTPPV-EVLQALISNTAGNGGAQVQQPQHVQSPKDEAKFINDFKRYGPPTFDGGSEKTTATNEWVRELEALYLYLGCNDPFKVKSAVFML
        A +G   VNP    + E LQ L+ N  G GGAQVQQP+  Q P+DE +FI DFKR+GPP F+G SE+ TAT EWVRELEALY+YLGC+D FKV+ AVFML
Subjt:  ALEGENVVNPPTPPV-EVLQALISNTAGNGGAQVQQPQHVQSPKDEAKFINDFKRYGPPTFDGGSEKTTATNEWVRELEALYLYLGCNDPFKVKSAVFML

Query:  RGEALNWWDSVATAEDHANVHITWARFKDLLYDYYFSKSLKDAKEVEF
        RGEA+NWW+SVA AEDH NV +TWARFKDLLY+YYF  ++++ K  EF
Subjt:  RGEALNWWDSVATAEDHANVHITWARFKDLLYDYYFSKSLKDAKEVEF

A0A6J1DUM2 uncharacterized protein LOC1110232471.3e-4859.88Show/hide
Query:  MSPRRSMRIRANVNPALEGENVVNPPTPPVEVLQALISNTAGNGGAQVQQPQHVQSPKDEAKFINDFKRYGPPTFDGGSEKTTATNEWVRELEALYLYLG
        M PR SMR+RA+ +PA                         G GG Q   PQH+ +P+ EA+FI DFKRYGPPTFDG SE+ TA  EW+RELEALY YLG
Subjt:  MSPRRSMRIRANVNPALEGENVVNPPTPPVEVLQALISNTAGNGGAQVQQPQHVQSPKDEAKFINDFKRYGPPTFDGGSEKTTATNEWVRELEALYLYLG

Query:  CNDPFKVKSAVFMLRGEALNWWDSVATAEDHANVHITWARFKDLLYDYYFSKSLKDAKEVEF
        C D FKVK AVFMLRGEALNWWDSVA AED+ANV I WARFK+LLYDYY+ +++KD KE EF
Subjt:  CNDPFKVKSAVFMLRGEALNWWDSVATAEDHANVHITWARFKDLLYDYYFSKSLKDAKEVEF

A0A6J1DVA0 uncharacterized protein LOC1110234241.5e-5763.07Show/hide
Query:  MSPRRSMRIRANVNPALEGENVVNPPTPPV--------------EVLQALISNTAGNGGAQVQQPQHVQSPKDEAKFINDFKRYGPPTFDGGSEKTTATN
        M PRRSMR+RA+V+PA  GENV +PP PP+                  ALI+NTAG GGAQ Q P+H+ +P+ EA+FI DFKRYGPPTF GGSE+ T   
Subjt:  MSPRRSMRIRANVNPALEGENVVNPPTPPV--------------EVLQALISNTAGNGGAQVQQPQHVQSPKDEAKFINDFKRYGPPTFDGGSEKTTATN

Query:  EWVRELEALYLYLGCNDPFKVKSAVFMLRGEALNWWDSVATAEDHANVHITWARFKDLLYDYYFSKSLKDAKEVEF
        EWVRELEALY YLGC D FKVK AVFMLR EALNWWDSVA  EDHANV + WARFK+LLYD+Y+ ++++D KEVEF
Subjt:  EWVRELEALYLYLGCNDPFKVKSAVFMLRGEALNWWDSVATAEDHANVHITWARFKDLLYDYYFSKSLKDAKEVEF

A0A6J1DXQ7 uncharacterized protein LOC1110250885.5e-5270.21Show/hide
Query:  VNPPTPPV-EVLQALISNTAGNGGAQVQQPQHVQSPKDEAKFINDFKRYGPPTFDGGSEKTTATNEWVRELEALYLYLGCNDPFKVKSAVFMLRGEALNW
        VNP    + E LQALI+NTAG GGAQ   P+H  +P+ EA+FI DFKRYGPPTFDGGSE+ TA   WVRELEALY YLGC D FKVK  VFMLRGEALNW
Subjt:  VNPPTPPV-EVLQALISNTAGNGGAQVQQPQHVQSPKDEAKFINDFKRYGPPTFDGGSEKTTATNEWVRELEALYLYLGCNDPFKVKSAVFMLRGEALNW

Query:  WDSVATAEDHANVHITWARFKDLLYDYYFSKSLKDAKEVEF
        WDS+A AEDHANV + WARFKDLLYDYY+ +++KD KE EF
Subjt:  WDSVATAEDHANVHITWARFKDLLYDYYFSKSLKDAKEVEF

A0A6J1DZH0 uncharacterized protein LOC1110257167.2e-5275Show/hide
Query:  ALISNTAGNGGAQVQQPQHVQSPKDEAKFINDFKRYGPPTFDGGSEKTTATNEWVRELEALYLYLGCNDPFKVKSAVFMLRGEALNWWDSVATAEDHANV
        AL++NTAG GGAQ Q P+H  +P+ EA+FI DFKRYGPPTFDGGSEK TA  EWVRELEALY+YLGC D FK K AVFMLRGEALNWWDSV  AEDHANV
Subjt:  ALISNTAGNGGAQVQQPQHVQSPKDEAKFINDFKRYGPPTFDGGSEKTTATNEWVRELEALYLYLGCNDPFKVKSAVFMLRGEALNWWDSVATAEDHANV

Query:  HITWARFKDLLYDYYFSKSLKDAKEVEF
          TWARFKDLLYDYY+ +++KD KE EF
Subjt:  HITWARFKDLLYDYYFSKSLKDAKEVEF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCCCCGTCGTAGTATGAGAATTCGTGCGAATGTTAACCCAGCTCTTGAAGGCGAAAATGTGGTGAACCCACCGACTCCTCCAGTGGAAGTGTTACAGGCACTGAT
TAGCAACACGGCTGGGAACGGTGGTGCACAAGTTCAGCAACCCCAGCATGTTCAATCTCCTAAAGATGAGGCCAAGTTCATCAATGATTTCAAGCGTTACGGGCCCCCTA
CTTTTGATGGAGGAAGCGAGAAAACCACTGCAACAAATGAGTGGGTTAGGGAGTTAGAAGCTCTGTACTTGTACCTAGGTTGCAACGACCCATTCAAAGTCAAGAGTGCA
GTGTTTATGTTGAGAGGTGAAGCTCTGAATTGGTGGGATTCGGTAGCAACTGCAGAAGACCATGCTAATGTACATATCACCTGGGCTAGATTCAAGGACTTGCTGTATGA
TTACTATTTTTCGAAGTCCTTGAAGGATGCTAAGGAAGTAGAATTCTTTATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGCCCCGTCGTAGTATGAGAATTCGTGCGAATGTTAACCCAGCTCTTGAAGGCGAAAATGTGGTGAACCCACCGACTCCTCCAGTGGAAGTGTTACAGGCACTGAT
TAGCAACACGGCTGGGAACGGTGGTGCACAAGTTCAGCAACCCCAGCATGTTCAATCTCCTAAAGATGAGGCCAAGTTCATCAATGATTTCAAGCGTTACGGGCCCCCTA
CTTTTGATGGAGGAAGCGAGAAAACCACTGCAACAAATGAGTGGGTTAGGGAGTTAGAAGCTCTGTACTTGTACCTAGGTTGCAACGACCCATTCAAAGTCAAGAGTGCA
GTGTTTATGTTGAGAGGTGAAGCTCTGAATTGGTGGGATTCGGTAGCAACTGCAGAAGACCATGCTAATGTACATATCACCTGGGCTAGATTCAAGGACTTGCTGTATGA
TTACTATTTTTCGAAGTCCTTGAAGGATGCTAAGGAAGTAGAATTCTTTATCTGA
Protein sequenceShow/hide protein sequence
MSPRRSMRIRANVNPALEGENVVNPPTPPVEVLQALISNTAGNGGAQVQQPQHVQSPKDEAKFINDFKRYGPPTFDGGSEKTTATNEWVRELEALYLYLGCNDPFKVKSA
VFMLRGEALNWWDSVATAEDHANVHITWARFKDLLYDYYFSKSLKDAKEVEFFI