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Moc01g03680 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g03680
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr1:2358718..2359438
RNA-Seq ExpressionMoc01g03680
SyntenyMoc01g03680
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155341.1 uncharacterized protein LOC111022474 [Momordica charantia]2.0e-3153.21Show/hide
Query:  MRGPVDLQRPTTYAEVVRGASVMDKDVTIKTQTPQEI--------GLFRARAFTLTNAEVENAETIVTGIVLVFSVPAYALFNLGLSHTFISNAFIRQAN
        ++G + L+ PTTYA  VR A VMDK +  + Q+ Q I        G  RAR F LT  +VE+AE +VTG VLV S+PAYALF+ G SH+FI++ F+R A+
Subjt:  MRGPVDLQRPTTYAEVVRGASVMDKDVTIKTQTPQEI--------GLFRARAFTLTNAEVENAETIVTGIVLVFSVPAYALFNLGLSHTFISNAFIRQAN

Query:  LKLKTLGFQLSMSTPSDSVMVSNQAVKAGKLSFDDQTLEARLIQIDMGDFDVILGM
        L+L++LGF  S+ST S SV+ ++Q VK G+LSFD Q L+ +LIQ+DM DFDVILGM
Subjt:  LKLKTLGFQLSMSTPSDSVMVSNQAVKAGKLSFDDQTLEARLIQIDMGDFDVILGM

XP_022156067.1 uncharacterized protein LOC111023035 [Momordica charantia]5.5e-2962.16Show/hide
Query:  GLFRARAFTLTNAEVENAETIVTGIVLVFSVPAYALFNLGLSHTFISNAFIRQANLKLKTLGFQLSMSTPSDSVMVSNQAVKAGKLSFDDQTLEARLIQI
        G  RAR F LT  +VE+AE +VTG +LV S+PAYALF+ G SH+FI++ F++ A+L+L++LGF LS+STPS SV+V++Q VK G+LSFD QTLE +LIQ+
Subjt:  GLFRARAFTLTNAEVENAETIVTGIVLVFSVPAYALFNLGLSHTFISNAFIRQANLKLKTLGFQLSMSTPSDSVMVSNQAVKAGKLSFDDQTLEARLIQI

Query:  DMGDFDVILGM
        DM DFDVILGM
Subjt:  DMGDFDVILGM

XP_022156326.1 uncharacterized protein LOC111023247 [Momordica charantia]3.6e-2839.21Show/hide
Query:  MRGPVDLQRPTTYAEVVRGASVMDKDVTIKTQTPQEIGLF------------------------------------------------------------
        +RGPVDLQRPTTYAE VRGA VMDKDV+ K     E+G                                                              
Subjt:  MRGPVDLQRPTTYAEVVRGASVMDKDVTIKTQTPQEIGLF------------------------------------------------------------

Query:  ----------------------------RARAFTLTNAEVENAETIVTGIVLVFSVPAYALFNLGLSHTFISNAFIRQANLKLKTLGFQLSMSTPSDSVM
                                    RAR F LT  E  +AET+VTG VLV  VPAY LF+ G SHTFIS+ F+RQA L+L+ LGF LS+STPS S++
Subjt:  ----------------------------RARAFTLTNAEVENAETIVTGIVLVFSVPAYALFNLGLSHTFISNAFIRQANLKLKTLGFQLSMSTPSDSVM

Query:  VSNQAVKAGKLSFDDQTLEARLIQIDM
        +++Q V+A +LSFD+QTL ARLIQ+DM
Subjt:  VSNQAVKAGKLSFDDQTLEARLIQIDM

XP_022156985.1 uncharacterized protein LOC111023814 [Momordica charantia]4.5e-3155.41Show/hide
Query:  MRGPVDLQRPTTYAEVVRGASVMDKDVTIKTQTPQEIGLFRARAFTLTNAEVENAETIVTGIVLVFSVPAYALFNLGLSHTFISNAFIRQANLKLKTLGF
        ++GPVDLQRP TYAE V+G  +MDKDV  K Q  QE+              +      ++ IVLV +VPAYALF+ G SHTFIS AF+ QANL L+ LGF
Subjt:  MRGPVDLQRPTTYAEVVRGASVMDKDVTIKTQTPQEIGLFRARAFTLTNAEVENAETIVTGIVLVFSVPAYALFNLGLSHTFISNAFIRQANLKLKTLGF

Query:  QLSMSTPSDSVMVSNQAVKAGKLSFDDQTLEARLIQIDMGDFDVILGM
         LS+STPS S M ++Q V+ GKLS  D TL ARLIQ+DM DFD+ILGM
Subjt:  QLSMSTPSDSVMVSNQAVKAGKLSFDDQTLEARLIQIDMGDFDVILGM

XP_022157413.1 uncharacterized protein LOC111024114 [Momordica charantia]1.2e-2862.16Show/hide
Query:  GLFRARAFTLTNAEVENAETIVTGIVLVFSVPAYALFNLGLSHTFISNAFIRQANLKLKTLGFQLSMSTPSDSVMVSNQAVKAGKLSFDDQTLEARLIQI
        G  RAR F LT  +VE+AE +VTG +LV S+PAYALF+ G SH+FI++ F+R A+L+L++LGF LS+STPS SV+V +Q VK G+LSFD QT E +LIQ+
Subjt:  GLFRARAFTLTNAEVENAETIVTGIVLVFSVPAYALFNLGLSHTFISNAFIRQANLKLKTLGFQLSMSTPSDSVMVSNQAVKAGKLSFDDQTLEARLIQI

Query:  DMGDFDVILGM
        DM DFDVILGM
Subjt:  DMGDFDVILGM

TrEMBL top hitse value%identityAlignment
A0A6J1DR22 uncharacterized protein LOC1110230352.7e-2962.16Show/hide
Query:  GLFRARAFTLTNAEVENAETIVTGIVLVFSVPAYALFNLGLSHTFISNAFIRQANLKLKTLGFQLSMSTPSDSVMVSNQAVKAGKLSFDDQTLEARLIQI
        G  RAR F LT  +VE+AE +VTG +LV S+PAYALF+ G SH+FI++ F++ A+L+L++LGF LS+STPS SV+V++Q VK G+LSFD QTLE +LIQ+
Subjt:  GLFRARAFTLTNAEVENAETIVTGIVLVFSVPAYALFNLGLSHTFISNAFIRQANLKLKTLGFQLSMSTPSDSVMVSNQAVKAGKLSFDDQTLEARLIQI

Query:  DMGDFDVILGM
        DM DFDVILGM
Subjt:  DMGDFDVILGM

A0A6J1DRF5 uncharacterized protein LOC1110224749.9e-3253.21Show/hide
Query:  MRGPVDLQRPTTYAEVVRGASVMDKDVTIKTQTPQEI--------GLFRARAFTLTNAEVENAETIVTGIVLVFSVPAYALFNLGLSHTFISNAFIRQAN
        ++G + L+ PTTYA  VR A VMDK +  + Q+ Q I        G  RAR F LT  +VE+AE +VTG VLV S+PAYALF+ G SH+FI++ F+R A+
Subjt:  MRGPVDLQRPTTYAEVVRGASVMDKDVTIKTQTPQEI--------GLFRARAFTLTNAEVENAETIVTGIVLVFSVPAYALFNLGLSHTFISNAFIRQAN

Query:  LKLKTLGFQLSMSTPSDSVMVSNQAVKAGKLSFDDQTLEARLIQIDMGDFDVILGM
        L+L++LGF  S+ST S SV+ ++Q VK G+LSFD Q L+ +LIQ+DM DFDVILGM
Subjt:  LKLKTLGFQLSMSTPSDSVMVSNQAVKAGKLSFDDQTLEARLIQIDMGDFDVILGM

A0A6J1DRW8 uncharacterized protein LOC1110238142.2e-3155.41Show/hide
Query:  MRGPVDLQRPTTYAEVVRGASVMDKDVTIKTQTPQEIGLFRARAFTLTNAEVENAETIVTGIVLVFSVPAYALFNLGLSHTFISNAFIRQANLKLKTLGF
        ++GPVDLQRP TYAE V+G  +MDKDV  K Q  QE+              +      ++ IVLV +VPAYALF+ G SHTFIS AF+ QANL L+ LGF
Subjt:  MRGPVDLQRPTTYAEVVRGASVMDKDVTIKTQTPQEIGLFRARAFTLTNAEVENAETIVTGIVLVFSVPAYALFNLGLSHTFISNAFIRQANLKLKTLGF

Query:  QLSMSTPSDSVMVSNQAVKAGKLSFDDQTLEARLIQIDMGDFDVILGM
         LS+STPS S M ++Q V+ GKLS  D TL ARLIQ+DM DFD+ILGM
Subjt:  QLSMSTPSDSVMVSNQAVKAGKLSFDDQTLEARLIQIDMGDFDVILGM

A0A6J1DTA8 uncharacterized protein LOC1110241146.0e-2962.16Show/hide
Query:  GLFRARAFTLTNAEVENAETIVTGIVLVFSVPAYALFNLGLSHTFISNAFIRQANLKLKTLGFQLSMSTPSDSVMVSNQAVKAGKLSFDDQTLEARLIQI
        G  RAR F LT  +VE+AE +VTG +LV S+PAYALF+ G SH+FI++ F+R A+L+L++LGF LS+STPS SV+V +Q VK G+LSFD QT E +LIQ+
Subjt:  GLFRARAFTLTNAEVENAETIVTGIVLVFSVPAYALFNLGLSHTFISNAFIRQANLKLKTLGFQLSMSTPSDSVMVSNQAVKAGKLSFDDQTLEARLIQI

Query:  DMGDFDVILGM
        DM DFDVILGM
Subjt:  DMGDFDVILGM

A0A6J1DUM2 uncharacterized protein LOC1110232471.7e-2839.21Show/hide
Query:  MRGPVDLQRPTTYAEVVRGASVMDKDVTIKTQTPQEIGLF------------------------------------------------------------
        +RGPVDLQRPTTYAE VRGA VMDKDV+ K     E+G                                                              
Subjt:  MRGPVDLQRPTTYAEVVRGASVMDKDVTIKTQTPQEIGLF------------------------------------------------------------

Query:  ----------------------------RARAFTLTNAEVENAETIVTGIVLVFSVPAYALFNLGLSHTFISNAFIRQANLKLKTLGFQLSMSTPSDSVM
                                    RAR F LT  E  +AET+VTG VLV  VPAY LF+ G SHTFIS+ F+RQA L+L+ LGF LS+STPS S++
Subjt:  ----------------------------RARAFTLTNAEVENAETIVTGIVLVFSVPAYALFNLGLSHTFISNAFIRQANLKLKTLGFQLSMSTPSDSVM

Query:  VSNQAVKAGKLSFDDQTLEARLIQIDM
        +++Q V+A +LSFD+QTL ARLIQ+DM
Subjt:  VSNQAVKAGKLSFDDQTLEARLIQIDM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGGACCAGTTGATCTTCAGCGACCAACCACCTACGCGGAAGTAGTTAGGGGTGCATCGGTAATGGACAAGGATGTCACTATTAAGACTCAAACACCTCAGGAAAT
TGGTCTCTTCAGGGCTCGAGCTTTTACACTTACCAATGCAGAAGTTGAAAATGCTGAGACTATTGTAACAGGTATTGTCCTAGTTTTTAGTGTACCTGCTTATGCATTGT
TTAATTTGGGTTTAAGTCACACCTTTATTTCCAATGCGTTTATTCGACAGGCGAATCTAAAGCTAAAAACATTAGGTTTCCAACTATCGATGTCTACACCGTCGGATTCA
GTTATGGTTTCTAATCAAGCGGTGAAAGCTGGGAAGTTATCTTTTGACGATCAGACCTTGGAGGCTAGATTAATCCAAATCGACATGGGGGATTTTGATGTTATATTGGG
CATGGTTGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGGGACCAGTTGATCTTCAGCGACCAACCACCTACGCGGAAGTAGTTAGGGGTGCATCGGTAATGGACAAGGATGTCACTATTAAGACTCAAACACCTCAGGAAAT
TGGTCTCTTCAGGGCTCGAGCTTTTACACTTACCAATGCAGAAGTTGAAAATGCTGAGACTATTGTAACAGGTATTGTCCTAGTTTTTAGTGTACCTGCTTATGCATTGT
TTAATTTGGGTTTAAGTCACACCTTTATTTCCAATGCGTTTATTCGACAGGCGAATCTAAAGCTAAAAACATTAGGTTTCCAACTATCGATGTCTACACCGTCGGATTCA
GTTATGGTTTCTAATCAAGCGGTGAAAGCTGGGAAGTTATCTTTTGACGATCAGACCTTGGAGGCTAGATTAATCCAAATCGACATGGGGGATTTTGATGTTATATTGGG
CATGGTTGGCTAG
Protein sequenceShow/hide protein sequence
MRGPVDLQRPTTYAEVVRGASVMDKDVTIKTQTPQEIGLFRARAFTLTNAEVENAETIVTGIVLVFSVPAYALFNLGLSHTFISNAFIRQANLKLKTLGFQLSMSTPSDS
VMVSNQAVKAGKLSFDDQTLEARLIQIDMGDFDVILGMVG