| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0042379.1 reverse transcriptase [Cucumis melo var. makuwa] | 2.6e-39 | 28.01 | Show/hide |
Query: MCKEAHRVSDCPHRAALKALQATRANGPEVETKTIETKVPTEEPTDKPYMGALKFMSALQRKVGE-----------------------------------
+CK H +CP++ A A QA+ A+ + E + E D P MGALKF+S+LQ+KVGE
Subjt: MCKEAHRVSDCPHRAALKALQATRANGPEVETKTIETKVPTEEPTDKPYMGALKFMSALQRKVGE-----------------------------------
Query: ----AKEPNCKIE-------------------------------GSLNFVIVRMDDFNVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTVVLTNIKQLSGV
AK N + E G ++FV+V+MDDF+VVLGMEFLLEH+VIPMPLAKCLV+TG P+VV T+++Q G+
Subjt: ----AKEPNCKIE-------------------------------GSLNFVIVRMDDFNVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTVVLTNIKQLSGV
Query: KMISALHLKRGLAHDEPTFMAIPVIEEESSKEVIPR----------------------------------------------------------------
KMISA+ LK+GL+ DEPTFMAIP+ E+S+E +P+
Subjt: KMISALHLKRGLAHDEPTFMAIPVIEEESSKEVIPR----------------------------------------------------------------
Query: ------------------------------------------------------------------------KTEKSRLF--------------------
K ++++L+
Subjt: ------------------------------------------------------------------------KTEKSRLF--------------------
Query: -------KIGKMAV-------------------------------------------------------AFDKLKKAMMEGPVLGITDVTKSFEAETDAL
+ GK+AV AF+ LK+AMMEGP+LGI DVTK FE ETDA
Subjt: -------KIGKMAV-------------------------------------------------------AFDKLKKAMMEGPVLGITDVTKSFEAETDAL
Query: DFALGGVLLQDGHPVAYESRKLNDAEKRYVASEKEMLAV
D+ALGGVLLQ+GHP+AYESRKLN AE+ Y SEKEMLAV
Subjt: DFALGGVLLQDGHPVAYESRKLNDAEKRYVASEKEMLAV
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| KAA0045292.1 reverse transcriptase [Cucumis melo var. makuwa] | 7.9e-36 | 51.55 | Show/hide |
Query: DCPHRAALKALQATRANGPEVETKTIETKVPTEEPTDKPYMGALKFMSALQRKVGEAKEPNCK------IEGSLNFVIVRMDDFNVVLGMEFLLEHKVIP
+CP++ A A QA+ A+ + E +V E D P MGALKF+S+LQ+KVGE P + G ++FV+V+MDDF+VVLGMEFLLEH+VIP
Subjt: DCPHRAALKALQATRANGPEVETKTIETKVPTEEPTDKPYMGALKFMSALQRKVGEAKEPNCK------IEGSLNFVIVRMDDFNVVLGMEFLLEHKVIP
Query: MPLAKCLVVTGSDPTVVLTNIKQLSGVKMISALHLKRGLAHDEPTFMAIPVIEEESSKEVI
MPLAKCLV+TGS P+VV T+++Q G+KMISA+ LK+GL+ +EPTFM IP+ ++S E++
Subjt: MPLAKCLVVTGSDPTVVLTNIKQLSGVKMISALHLKRGLAHDEPTFMAIPVIEEESSKEVI
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| XP_022155185.1 uncharacterized protein LOC111022320 [Momordica charantia] | 9.0e-48 | 29.58 | Show/hide |
Query: MCKEAHRVSDCPHRAALKALQATRANGPEVETKTIETKVPTEEPTDKPYMGALKFMSALQRKVGEAKEP-------------------------------
+CK HRV +CP+RAAL+A QAT N +E + ET P E+ D P MGALKF+SALQ+K E KEP
Subjt: MCKEAHRVSDCPHRAALKALQATRANGPEVETKTIETKVPTEEPTDKPYMGALKFMSALQRKVGEAKEP-------------------------------
Query: ------------------------------------NCKI---EGSLNFVIVRMDDFNVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTVVLTNIKQLSGV
+ K+ G ++FVIVRMDDF+VVLG++FLLEHKVIPMPLAKCLVVT SDP VV T+IKQ SGV
Subjt: ------------------------------------NCKI---EGSLNFVIVRMDDFNVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTVVLTNIKQLSGV
Query: KMISALHLKRGLAHDEPTFMAIPVIEEESSKEVIPRKTEK------------------------------------------------------------
KMISAL LK+G+A DEPTFMAIPV E +S+E++PR+ ++
Subjt: KMISALHLKRGLAHDEPTFMAIPVIEEESSKEVIPRKTEK------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------------SRLFKIGKMAV---------------------------------------------------------
+ + G++ +
Subjt: --------------------------------SRLFKIGKMAV---------------------------------------------------------
Query: -----AFDKLKKAMMEGPVLGITDVTKSFEAETDALDFALGGVLLQDGHPVAYESRKLNDAEKRYVASEKEMLAVVHC
AF+ LKKAMMEG VLGI DVT+ FE ETDA DFALGGVLLQDGHP+AYES+KLNDAE+RY ASEKEMLAVVHC
Subjt: -----AFDKLKKAMMEGPVLGITDVTKSFEAETDALDFALGGVLLQDGHPVAYESRKLNDAEKRYVASEKEMLAVVHC
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| XP_022972954.1 uncharacterized protein LOC111471473 [Cucurbita maxima] | 1.0e-38 | 53.33 | Show/hide |
Query: MCKEAHRVSDCPHRAALKALQATRANGPEVETKTIETKVPTEEPTDKPYMGALKFMSALQRKVGEAKEPNCKIE-------------GSLNFVIVRMDDF
+CK H+VS CPHRA+L ALQ + E IET + +E D P MGALKF+SALQRKV EP +E G L+ V+ RMDDF
Subjt: MCKEAHRVSDCPHRAALKALQATRANGPEVETKTIETKVPTEEPTDKPYMGALKFMSALQRKVGEAKEPNCKIE-------------GSLNFVIVRMDDF
Query: NVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTVVLTNIKQLSGVKMISALHLKRGLAHDEPTFMAIPVIEEESSKEVIPRK
+VVLGMEFLLEHKVIPMPLAKCLV+T S+PTV+ +IKQ ++MISA+ LKRGLA +EPTFM IP++E +++E +P +
Subjt: NVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTVVLTNIKQLSGVKMISALHLKRGLAHDEPTFMAIPVIEEESSKEVIPRK
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| XP_022975176.1 uncharacterized protein LOC111474215 [Cucurbita maxima] | 1.3e-41 | 29.63 | Show/hide |
Query: MCKEAHRVSDCPHRAALKALQATRANGPEVETKTIETKVPTEEPTDKPYMGALKFMSALQRKVGEAKEPNCKIE-------------GSLNFVIVRMDDF
+CK H+VS CPHRA+L ALQ + + + +ET + +E D P MGALKF+SALQRKV EP +E G L+ V+ RMDDF
Subjt: MCKEAHRVSDCPHRAALKALQATRANGPEVETKTIETKVPTEEPTDKPYMGALKFMSALQRKVGEAKEPNCKIE-------------GSLNFVIVRMDDF
Query: NVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTVVLTNIKQLSGVKMISALHLKRGLAHDEPTFMAIPVIEEESSKEVIPR---------------------
+VVLGMEFLLEHKVIPMPLAKCLVVT +PTV+ +IKQ ++MIS + LKRGLA +E TFMAIP++E +++E +P
Subjt: NVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTVVLTNIKQLSGVKMISALHLKRGLAHDEPTFMAIPVIEEESSKEVIPR---------------------
Query: -------------------KTEKSRLFKIG---------------------------------KMAV---------------------------------
+ + L K G K+ V
Subjt: -------------------KTEKSRLFKIG---------------------------------KMAV---------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------AFDKLKKAMMEGPVLGITDVTKSFEAETDALDFALGGVLLQDGHPVAYESRKLNDAEKRY
AF+ LK MM GPVLG+ DVTK FE ETDA DFALGGVL+Q+GHP+A+ESRKLNDAE+RY
Subjt: ----------------------------------------AFDKLKKAMMEGPVLGITDVTKSFEAETDALDFALGGVLLQDGHPVAYESRKLNDAEKRY
Query: VASEKEMLAVVHC
+ SEK+ML VVHC
Subjt: VASEKEMLAVVHC
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5D3CW71 Reverse transcriptase | 1.3e-39 | 28.01 | Show/hide |
Query: MCKEAHRVSDCPHRAALKALQATRANGPEVETKTIETKVPTEEPTDKPYMGALKFMSALQRKVGE-----------------------------------
+CK H +CP++ A A QA+ A+ + E + E D P MGALKF+S+LQ+KVGE
Subjt: MCKEAHRVSDCPHRAALKALQATRANGPEVETKTIETKVPTEEPTDKPYMGALKFMSALQRKVGE-----------------------------------
Query: ----AKEPNCKIE-------------------------------GSLNFVIVRMDDFNVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTVVLTNIKQLSGV
AK N + E G ++FV+V+MDDF+VVLGMEFLLEH+VIPMPLAKCLV+TG P+VV T+++Q G+
Subjt: ----AKEPNCKIE-------------------------------GSLNFVIVRMDDFNVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTVVLTNIKQLSGV
Query: KMISALHLKRGLAHDEPTFMAIPVIEEESSKEVIPR----------------------------------------------------------------
KMISA+ LK+GL+ DEPTFMAIP+ E+S+E +P+
Subjt: KMISALHLKRGLAHDEPTFMAIPVIEEESSKEVIPR----------------------------------------------------------------
Query: ------------------------------------------------------------------------KTEKSRLF--------------------
K ++++L+
Subjt: ------------------------------------------------------------------------KTEKSRLF--------------------
Query: -------KIGKMAV-------------------------------------------------------AFDKLKKAMMEGPVLGITDVTKSFEAETDAL
+ GK+AV AF+ LK+AMMEGP+LGI DVTK FE ETDA
Subjt: -------KIGKMAV-------------------------------------------------------AFDKLKKAMMEGPVLGITDVTKSFEAETDAL
Query: DFALGGVLLQDGHPVAYESRKLNDAEKRYVASEKEMLAV
D+ALGGVLLQ+GHP+AYESRKLN AE+ Y SEKEMLAV
Subjt: DFALGGVLLQDGHPVAYESRKLNDAEKRYVASEKEMLAV
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| A0A6J1DLQ6 uncharacterized protein LOC111022320 | 4.4e-48 | 29.58 | Show/hide |
Query: MCKEAHRVSDCPHRAALKALQATRANGPEVETKTIETKVPTEEPTDKPYMGALKFMSALQRKVGEAKEP-------------------------------
+CK HRV +CP+RAAL+A QAT N +E + ET P E+ D P MGALKF+SALQ+K E KEP
Subjt: MCKEAHRVSDCPHRAALKALQATRANGPEVETKTIETKVPTEEPTDKPYMGALKFMSALQRKVGEAKEP-------------------------------
Query: ------------------------------------NCKI---EGSLNFVIVRMDDFNVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTVVLTNIKQLSGV
+ K+ G ++FVIVRMDDF+VVLG++FLLEHKVIPMPLAKCLVVT SDP VV T+IKQ SGV
Subjt: ------------------------------------NCKI---EGSLNFVIVRMDDFNVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTVVLTNIKQLSGV
Query: KMISALHLKRGLAHDEPTFMAIPVIEEESSKEVIPRKTEK------------------------------------------------------------
KMISAL LK+G+A DEPTFMAIPV E +S+E++PR+ ++
Subjt: KMISALHLKRGLAHDEPTFMAIPVIEEESSKEVIPRKTEK------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------------SRLFKIGKMAV---------------------------------------------------------
+ + G++ +
Subjt: --------------------------------SRLFKIGKMAV---------------------------------------------------------
Query: -----AFDKLKKAMMEGPVLGITDVTKSFEAETDALDFALGGVLLQDGHPVAYESRKLNDAEKRYVASEKEMLAVVHC
AF+ LKKAMMEG VLGI DVT+ FE ETDA DFALGGVLLQDGHP+AYES+KLNDAE+RY ASEKEMLAVVHC
Subjt: -----AFDKLKKAMMEGPVLGITDVTKSFEAETDALDFALGGVLLQDGHPVAYESRKLNDAEKRYVASEKEMLAVVHC
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| A0A6J1ID35 uncharacterized protein LOC111471473 | 4.8e-39 | 53.33 | Show/hide |
Query: MCKEAHRVSDCPHRAALKALQATRANGPEVETKTIETKVPTEEPTDKPYMGALKFMSALQRKVGEAKEPNCKIE-------------GSLNFVIVRMDDF
+CK H+VS CPHRA+L ALQ + E IET + +E D P MGALKF+SALQRKV EP +E G L+ V+ RMDDF
Subjt: MCKEAHRVSDCPHRAALKALQATRANGPEVETKTIETKVPTEEPTDKPYMGALKFMSALQRKVGEAKEPNCKIE-------------GSLNFVIVRMDDF
Query: NVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTVVLTNIKQLSGVKMISALHLKRGLAHDEPTFMAIPVIEEESSKEVIPRK
+VVLGMEFLLEHKVIPMPLAKCLV+T S+PTV+ +IKQ ++MISA+ LKRGLA +EPTFM IP++E +++E +P +
Subjt: NVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTVVLTNIKQLSGVKMISALHLKRGLAHDEPTFMAIPVIEEESSKEVIPRK
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| A0A6J1IDF7 uncharacterized protein LOC111474215 | 6.1e-42 | 29.63 | Show/hide |
Query: MCKEAHRVSDCPHRAALKALQATRANGPEVETKTIETKVPTEEPTDKPYMGALKFMSALQRKVGEAKEPNCKIE-------------GSLNFVIVRMDDF
+CK H+VS CPHRA+L ALQ + + + +ET + +E D P MGALKF+SALQRKV EP +E G L+ V+ RMDDF
Subjt: MCKEAHRVSDCPHRAALKALQATRANGPEVETKTIETKVPTEEPTDKPYMGALKFMSALQRKVGEAKEPNCKIE-------------GSLNFVIVRMDDF
Query: NVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTVVLTNIKQLSGVKMISALHLKRGLAHDEPTFMAIPVIEEESSKEVIPR---------------------
+VVLGMEFLLEHKVIPMPLAKCLVVT +PTV+ +IKQ ++MIS + LKRGLA +E TFMAIP++E +++E +P
Subjt: NVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTVVLTNIKQLSGVKMISALHLKRGLAHDEPTFMAIPVIEEESSKEVIPR---------------------
Query: -------------------KTEKSRLFKIG---------------------------------KMAV---------------------------------
+ + L K G K+ V
Subjt: -------------------KTEKSRLFKIG---------------------------------KMAV---------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------AFDKLKKAMMEGPVLGITDVTKSFEAETDALDFALGGVLLQDGHPVAYESRKLNDAEKRY
AF+ LK MM GPVLG+ DVTK FE ETDA DFALGGVL+Q+GHP+A+ESRKLNDAE+RY
Subjt: ----------------------------------------AFDKLKKAMMEGPVLGITDVTKSFEAETDALDFALGGVLLQDGHPVAYESRKLNDAEKRY
Query: VASEKEMLAVVHC
+ SEK+ML VVHC
Subjt: VASEKEMLAVVHC
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| A0A803N8Q7 Uncharacterized protein | 2.9e-36 | 40.71 | Show/hide |
Query: GALKFMSALQRKV-GEAKEPNCKI---EGSLNFVIVRMDDFNVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTVVLT-NIKQLSGVKMISALHLKRGLAHD
G++K +++ + V G A+ K+ G+L+F + MDDFN+VLGM+FL K +PMP ++V G P ++ T +++ S ++SA+ LK+GL +
Subjt: GALKFMSALQRKV-GEAKEPNCKI---EGSLNFVIVRMDDFNVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTVVLT-NIKQLSGVKMISALHLKRGLAHD
Query: EPTFMAIPVIEEESSKEVIPRKTEK-----------------SRLFKIGKMAVAFDKLKKAMMEGPVLGITDVTKSFEAETDALDFALGGVLLQDGHPVA
EPTF+A ++E+ + IP +K R K AF KLK +++ PVL + + K FE ETDA DF+LGGVLLQDGHP+A
Subjt: EPTFMAIPVIEEESSKEVIPRKTEK-----------------SRLFKIGKMAVAFDKLKKAMMEGPVLGITDVTKSFEAETDALDFALGGVLLQDGHPVA
Query: YESRKLNDAEKRYVASEKEMLAVVHC
+ESRKLN E++Y A EKE+LA+VHC
Subjt: YESRKLNDAEKRYVASEKEMLAVVHC
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 2.6e-13 | 54.93 | Show/hide |
Query: AFDKLKKAMMEGPVLGITDVTKSFEAETDALDFALGGVLLQDGHPVAYESRKLNDAEKRYVASEKEMLAVV
AF KLK + E P+L + D TK F TDA D ALG VL QDGHP++Y SR LN+ E Y EKE+LA+V
Subjt: AFDKLKKAMMEGPVLGITDVTKSFEAETDALDFALGGVLLQDGHPVAYESRKLNDAEKRYVASEKEMLAVV
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| P10273 Gag-Pol polyprotein | 3.7e-04 | 39.73 | Show/hide |
Query: TEKSRLFKIG-KMAVAFDKLKKAMMEGPVLGITDVTKSFEAETDALDFALGGVLLQD----GHPVAYESRKLN
T LF+ G + +AF+ +KKA++ P LG+ D+TK FE D GVL+Q PVAY S+KL+
Subjt: TEKSRLFKIG-KMAVAFDKLKKAMMEGPVLGITDVTKSFEAETDALDFALGGVLLQD----GHPVAYESRKLN
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| P10401 Retrovirus-related Pol polyprotein from transposon gypsy | 1.2e-05 | 37.5 | Show/hide |
Query: AFDKLKKAM-MEGPVLGITDVTKSFEAETDALDFALGGVLLQDGHPVAYESRKLNDAEKRYVASEKEMLAVV
AF +L+ + E +L D K F+ TDA +G VL Q+G P+ SR L E+ Y +E+E+LA+V
Subjt: AFDKLKKAM-MEGPVLGITDVTKSFEAETDALDFALGGVLLQDGHPVAYESRKLNDAEKRYVASEKEMLAVV
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 2.8e-12 | 50.7 | Show/hide |
Query: AFDKLKKAMMEGPVLGITDVTKSFEAETDALDFALGGVLLQDGHPVAYESRKLNDAEKRYVASEKEMLAVV
AF+KLK ++ P+L + D K F TDA + ALG VL Q+GHP+++ SR LND E Y A EKE+LA+V
Subjt: AFDKLKKAMMEGPVLGITDVTKSFEAETDALDFALGGVLLQDGHPVAYESRKLNDAEKRYVASEKEMLAVV
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 9.5e-08 | 41.33 | Show/hide |
Query: AFDKLKKAMMEGPVLGITDVTKSFEAETDALDFALGGVLLQD----GHPVAYESRKLNDAEKRYVASEKEMLAVV
+F+ LK + +L TK F TDA ++A+G VL QD P+AY SR LN E+ Y EKEMLA++
Subjt: AFDKLKKAMMEGPVLGITDVTKSFEAETDALDFALGGVLLQD----GHPVAYESRKLNDAEKRYVASEKEMLAVV
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