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Moc01g04170 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g04170
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr1:2727858..2728731
RNA-Seq ExpressionMoc01g04170
SyntenyMoc01g04170
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0090304 - nucleic acid metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR001969 - Aspartic peptidase, active site
IPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154299.1 uncharacterized protein LOC111021593 [Momordica charantia]5.3e-2575Show/hide
Query:  GTVLVHDVPAYVLFDSGSSHTFISSAFVRQATLELEPLGFLLSVSTPSGSILIASQKVRVGELSFDNQTLRARLIQLDMQDFDVIATM
        GTVLV + PAYVLFDSGSS TFIS+AFVRQ  LEL PLGFLL VSTPSGS++I+SQ V+VG LSFD Q L ARLIQLD++DFDVI  M
Subjt:  GTVLVHDVPAYVLFDSGSSHTFISSAFVRQATLELEPLGFLLSVSTPSGSILIASQKVRVGELSFDNQTLRARLIQLDMQDFDVIATM
XP_022154844.1 uncharacterized protein LOC111022005 [Momordica charantia]2.1e-2675Show/hide
Query:  GTVLVHDVPAYVLFDSGSSHTFISSAFVRQATLELEPLGFLLSVSTPSGSILIASQKVRVGELSFDNQTLRARLIQLDMQDFDVIATM
        G VLVH+VP Y LFDS SSHTFIS+AFVRQATL++E LG LLSVSTPSG+++IASQ VR  +LSFDNQTL+ARLIQLD++DFDVI  M
Subjt:  GTVLVHDVPAYVLFDSGSSHTFISSAFVRQATLELEPLGFLLSVSTPSGSILIASQKVRVGELSFDNQTLRARLIQLDMQDFDVIATM
XP_022156326.1 uncharacterized protein LOC111023247 [Momordica charantia]2.2e-3196.2Show/hide
Query:  GTVLVHDVPAYVLFDSGSSHTFISSAFVRQATLELEPLGFLLSVSTPSGSILIASQKVRVGELSFDNQTLRARLIQLDM
        GTVLVHDVPAYVLFDSGSSHTFISS FVRQATLELEPLGFLLSVSTPSGSILIASQKVR  ELSFDNQTLRARLIQLDM
Subjt:  GTVLVHDVPAYVLFDSGSSHTFISSAFVRQATLELEPLGFLLSVSTPSGSILIASQKVRVGELSFDNQTLRARLIQLDM
XP_022156992.1 uncharacterized protein LOC111023821 [Momordica charantia]4.0e-2573.03Show/hide
Query:  LGTVLVHDVPAYVLFDSGSSHTFISSAFVRQATLELEPLGFLLSVSTPSGSILIASQKVRVGELSFDNQTLRARLIQLDMQDFDVIATM
        LGTVLV  +PAY LFDS SSH+FI+S FVR A LELE LGFLLSVSTPSGS+L+ SQ V+ G+LSFD QTL  +LIQLDMQDFDVI  M
Subjt:  LGTVLVHDVPAYVLFDSGSSHTFISSAFVRQATLELEPLGFLLSVSTPSGSILIASQKVRVGELSFDNQTLRARLIQLDMQDFDVIATM
XP_022159077.1 uncharacterized protein LOC111025517 [Momordica charantia]4.5e-3287.5Show/hide
Query:  GTVLVHDVPAYVLFDSGSSHTFISSAFVRQATLELEPLGFLLSVSTPSGSILIASQKVRVGELSFDNQTLRARLIQLDMQDFDVIATM
        GT LVH+VPAYVLFD GSSHTFIS+AFVRQATLELEPLGFLLSVSTPSGS+LIASQ VR GELSFDNQTL ARLIQLDM+DFDVI  M
Subjt:  GTVLVHDVPAYVLFDSGSSHTFISSAFVRQATLELEPLGFLLSVSTPSGSILIASQKVRVGELSFDNQTLRARLIQLDMQDFDVIATM
TrEMBL top hitse value%identityAlignment
A0A6J1DLN2 uncharacterized protein LOC1110215932.6e-2575Show/hide
Query:  GTVLVHDVPAYVLFDSGSSHTFISSAFVRQATLELEPLGFLLSVSTPSGSILIASQKVRVGELSFDNQTLRARLIQLDMQDFDVIATM
        GTVLV + PAYVLFDSGSS TFIS+AFVRQ  LEL PLGFLL VSTPSGS++I+SQ V+VG LSFD Q L ARLIQLD++DFDVI  M
Subjt:  GTVLVHDVPAYVLFDSGSSHTFISSAFVRQATLELEPLGFLLSVSTPSGSILIASQKVRVGELSFDNQTLRARLIQLDMQDFDVIATM
A0A6J1DNG3 uncharacterized protein LOC1110220051.0e-2675Show/hide
Query:  GTVLVHDVPAYVLFDSGSSHTFISSAFVRQATLELEPLGFLLSVSTPSGSILIASQKVRVGELSFDNQTLRARLIQLDMQDFDVIATM
        G VLVH+VP Y LFDS SSHTFIS+AFVRQATL++E LG LLSVSTPSG+++IASQ VR  +LSFDNQTL+ARLIQLD++DFDVI  M
Subjt:  GTVLVHDVPAYVLFDSGSSHTFISSAFVRQATLELEPLGFLLSVSTPSGSILIASQKVRVGELSFDNQTLRARLIQLDMQDFDVIATM
A0A6J1DTE5 uncharacterized protein LOC1110238212.0e-2573.03Show/hide
Query:  LGTVLVHDVPAYVLFDSGSSHTFISSAFVRQATLELEPLGFLLSVSTPSGSILIASQKVRVGELSFDNQTLRARLIQLDMQDFDVIATM
        LGTVLV  +PAY LFDS SSH+FI+S FVR A LELE LGFLLSVSTPSGS+L+ SQ V+ G+LSFD QTL  +LIQLDMQDFDVI  M
Subjt:  LGTVLVHDVPAYVLFDSGSSHTFISSAFVRQATLELEPLGFLLSVSTPSGSILIASQKVRVGELSFDNQTLRARLIQLDMQDFDVIATM
A0A6J1DUM2 uncharacterized protein LOC1110232471.1e-3196.2Show/hide
Query:  GTVLVHDVPAYVLFDSGSSHTFISSAFVRQATLELEPLGFLLSVSTPSGSILIASQKVRVGELSFDNQTLRARLIQLDM
        GTVLVHDVPAYVLFDSGSSHTFISS FVRQATLELEPLGFLLSVSTPSGSILIASQKVR  ELSFDNQTLRARLIQLDM
Subjt:  GTVLVHDVPAYVLFDSGSSHTFISSAFVRQATLELEPLGFLLSVSTPSGSILIASQKVRVGELSFDNQTLRARLIQLDM
A0A6J1DYU5 uncharacterized protein LOC1110255172.2e-3287.5Show/hide
Query:  GTVLVHDVPAYVLFDSGSSHTFISSAFVRQATLELEPLGFLLSVSTPSGSILIASQKVRVGELSFDNQTLRARLIQLDMQDFDVIATM
        GT LVH+VPAYVLFD GSSHTFIS+AFVRQATLELEPLGFLLSVSTPSGS+LIASQ VR GELSFDNQTL ARLIQLDM+DFDVI  M
Subjt:  GTVLVHDVPAYVLFDSGSSHTFISSAFVRQATLELEPLGFLLSVSTPSGSILIASQKVRVGELSFDNQTLRARLIQLDMQDFDVIATM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAAGAGAAGGAAGCAAGGCTTGATGATTTTGGTGGAGAAGTTGCTGGAATTTATAGCTGTGCAGAATTGGTTAGGTACTGTTTTAGTCCATGATGTGCCTGCGTA
TGTATTGTTTGATTCGGGGTCGAGCCACACTTTCATCTCTTCTGCGTTTGTTCGTCAGGCAACCCTCGAATTAGAGCCGTTAGGGTTTTTGTTGTCGGTTTCTACACCAT
CAGGGTCGATTTTGATCGCTAGTCAAAAGGTGAGGGTAGGTGAGTTGTCTTTTGATAATCAGACTCTAAGGGCAAGACTGATCCAGCTGGACATGCAAGATTTTGACGTT
ATTGCGACAATGTTAAATAGAGTGTTGAGCTTGCCACATTTTCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGATCAAGAGAAGGAAGCAAGGCTTGATGATTTTGGTGGAGAAGTTGCTGGAATTTATAGCTGTGCAGAATTGGTTAGGTACTGTTTTAGTCCATGATGTGCCTGCGTA
TGTATTGTTTGATTCGGGGTCGAGCCACACTTTCATCTCTTCTGCGTTTGTTCGTCAGGCAACCCTCGAATTAGAGCCGTTAGGGTTTTTGTTGTCGGTTTCTACACCAT
CAGGGTCGATTTTGATCGCTAGTCAAAAGGTGAGGGTAGGTGAGTTGTCTTTTGATAATCAGACTCTAAGGGCAAGACTGATCCAGCTGGACATGCAAGATTTTGACGTT
ATTGCGACAATGTTAAATAGAGTGTTGAGCTTGCCACATTTTCAATAA
Protein sequenceShow/hide protein sequence
MIKRRKQGLMILVEKLLEFIAVQNWLGTVLVHDVPAYVLFDSGSSHTFISSAFVRQATLELEPLGFLLSVSTPSGSILIASQKVRVGELSFDNQTLRARLIQLDMQDFDV
IATMLNRVLSLPHFQ