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Moc01g04370 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g04370
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr1:2861895..2864944
RNA-Seq ExpressionMoc01g04370
SyntenyMoc01g04370
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152352.1 uncharacterized protein LOC111020095 [Momordica charantia]5.6e-1783.33Show/hide
Query:  LLEDCLKAPAPNATVAVRNVDDRWIKANDKAKVYIMASISDVLCKKHEDTVTAKEIMDSL
        L EDC +A APNATVAVR   DRWIKANDKAKVYI+ASISDVL KKHEDT+TAKEIMDSL
Subjt:  LLEDCLKAPAPNATVAVRNVDDRWIKANDKAKVYIMASISDVLCKKHEDTVTAKEIMDSL
XP_022154837.1 uncharacterized protein LOC111022000 [Momordica charantia]2.3e-1885Show/hide
Query:  LLEDCLKAPAPNATVAVRNVDDRWIKANDKAKVYIMASISDVLCKKHEDTVTAKEIMDSL
        L EDC +APAPNAT+AVRN  DRWIKANDKAKVYI++SISDVL KKHEDTVTAKEIMDSL
Subjt:  LLEDCLKAPAPNATVAVRNVDDRWIKANDKAKVYIMASISDVLCKKHEDTVTAKEIMDSL
XP_022158062.1 uncharacterized protein LOC111024637 [Momordica charantia]4.7e-1680Show/hide
Query:  LLEDCLKAPAPNATVAVRNVDDRWIKANDKAKVYIMASISDVLCKKHEDTVTAKEIMDSL
        L EDC +APAPNATVAVRN+ DRWIKANDKAKV I+ASISDVL KKHE++V  KEIMDSL
Subjt:  LLEDCLKAPAPNATVAVRNVDDRWIKANDKAKVYIMASISDVLCKKHEDTVTAKEIMDSL
XP_022158197.1 uncharacterized protein LOC111024734 [Momordica charantia]7.3e-1781.67Show/hide
Query:  LLEDCLKAPAPNATVAVRNVDDRWIKANDKAKVYIMASISDVLCKKHEDTVTAKEIMDSL
        L EDC +AP  NATVAVRN  DRWIK+NDKAKVYI+ASISDVL KKHEDTVT KEIMDSL
Subjt:  LLEDCLKAPAPNATVAVRNVDDRWIKANDKAKVYIMASISDVLCKKHEDTVTAKEIMDSL
XP_022159023.1 uncharacterized protein LOC111025468 [Momordica charantia]2.2e-1360.26Show/hide
Query:  VWKSKPRQTPEMD--RSLL-EDCLKAPAPNATVAVRNVDDRWIKANDKAKVYIMASISDVLCKKHEDTVTAKEIMDSL
        +WKS       +D  RS+L E+C  APAPNA   VR   DRW+KANDKA+VYI+ASISDVL KKHE   TA+E+MDSL
Subjt:  VWKSKPRQTPEMD--RSLL-EDCLKAPAPNATVAVRNVDDRWIKANDKAKVYIMASISDVLCKKHEDTVTAKEIMDSL
TrEMBL top hitse value%identityAlignment
A0A6J1DFZ2 uncharacterized protein LOC1110200952.7e-1783.33Show/hide
Query:  LLEDCLKAPAPNATVAVRNVDDRWIKANDKAKVYIMASISDVLCKKHEDTVTAKEIMDSL
        L EDC +A APNATVAVR   DRWIKANDKAKVYI+ASISDVL KKHEDT+TAKEIMDSL
Subjt:  LLEDCLKAPAPNATVAVRNVDDRWIKANDKAKVYIMASISDVLCKKHEDTVTAKEIMDSL
A0A6J1DMS3 uncharacterized protein LOC1110220001.1e-1885Show/hide
Query:  LLEDCLKAPAPNATVAVRNVDDRWIKANDKAKVYIMASISDVLCKKHEDTVTAKEIMDSL
        L EDC +APAPNAT+AVRN  DRWIKANDKAKVYI++SISDVL KKHEDTVTAKEIMDSL
Subjt:  LLEDCLKAPAPNATVAVRNVDDRWIKANDKAKVYIMASISDVLCKKHEDTVTAKEIMDSL
A0A6J1DW68 uncharacterized protein LOC1110246372.3e-1680Show/hide
Query:  LLEDCLKAPAPNATVAVRNVDDRWIKANDKAKVYIMASISDVLCKKHEDTVTAKEIMDSL
        L EDC +APAPNATVAVRN+ DRWIKANDKAKV I+ASISDVL KKHE++V  KEIMDSL
Subjt:  LLEDCLKAPAPNATVAVRNVDDRWIKANDKAKVYIMASISDVLCKKHEDTVTAKEIMDSL
A0A6J1DWL0 uncharacterized protein LOC1110247343.5e-1781.67Show/hide
Query:  LLEDCLKAPAPNATVAVRNVDDRWIKANDKAKVYIMASISDVLCKKHEDTVTAKEIMDSL
        L EDC +AP  NATVAVRN  DRWIK+NDKAKVYI+ASISDVL KKHEDTVT KEIMDSL
Subjt:  LLEDCLKAPAPNATVAVRNVDDRWIKANDKAKVYIMASISDVLCKKHEDTVTAKEIMDSL
A0A6J1DXP1 uncharacterized protein LOC1110254681.1e-1360.26Show/hide
Query:  VWKSKPRQTPEMD--RSLL-EDCLKAPAPNATVAVRNVDDRWIKANDKAKVYIMASISDVLCKKHEDTVTAKEIMDSL
        +WKS       +D  RS+L E+C  APAPNA   VR   DRW+KANDKA+VYI+ASISDVL KKHE   TA+E+MDSL
Subjt:  VWKSKPRQTPEMD--RSLL-EDCLKAPAPNATVAVRNVDDRWIKANDKAKVYIMASISDVLCKKHEDTVTAKEIMDSL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGTCACCGCCAAACGTCTTAAACACTGCTGTAACGCACAAATCCTGCCGTCGGAGTTGCTGTTCGTCGGATGGTAGCAGCAGGTCGTCGAGGTTCGCCGCGGATCT
GACTCGTTCGTCGTGCGCCGCTGTAACAACCCGTTCGCCGTGTGCCGCCGCGAAGAGGAGCGGTGCTGGTTCGTTGCAGACCGTCGGGGAACGCGTCGCCGCTGCTGCAG
ATCGCCGGGACGTCGAGGAAGTTGTGCTGCCGCCCTGCTGCTACATAAACTGCCGCTGCTGCTGTTTCGAGGAGGCGCCGCCGCTCCCGTCGCCGTCGTCGCTCGAAAGT
CGTTCGTGGCTTCGGATTGGGCAAAAAATTGTAGAAAACAGCGAAGAAGACGAAGTAGACTGCGCCGATAGTGCCATCGCGCTATGCAGCAGCGCCATGGCGCTACGGGG
ACAGCACAAAGCGCCACGGCGCTGCACTATAGCGTCGCGGCGCCGTGCAGCGCCATGGCGCCATGCCAGGGTGCCGCAGTGCTGCTGCTGCAGCAGCGCCGTGGCGCTGC
CCTTAGGCGCCGAGGCGCTGTCCCGGGTGTCTTTCGACGCGGTTCCGAGGCTTCGGTTCGCGGATCGAGGGGGGATGCACAACCATCCCTACGGAGGGTTCATTGTATGG
AAATCAAAACCAAGGCAAACTCCAGAAATGGATAGGAGTCTCTTAGAGGATTGTCTTAAAGCTCCTGCGCCTAACGCCACTGTGGCGGTGCGCAACGTCGATGACAGGTG
GATCAAGGCCAATGACAAGGCCAAAGTCTACATCATGGCGAGCATATCTGATGTGCTTTGTAAGAAGCACGAGGACACGGTCACCGCTAAGGAGATCATGGACTCGCTGT
AG
mRNA sequenceShow/hide mRNA sequence
ATGTGGTCACCGCCAAACGTCTTAAACACTGCTGTAACGCACAAATCCTGCCGTCGGAGTTGCTGTTCGTCGGATGGTAGCAGCAGGTCGTCGAGGTTCGCCGCGGATCT
GACTCGTTCGTCGTGCGCCGCTGTAACAACCCGTTCGCCGTGTGCCGCCGCGAAGAGGAGCGGTGCTGGTTCGTTGCAGACCGTCGGGGAACGCGTCGCCGCTGCTGCAG
ATCGCCGGGACGTCGAGGAAGTTGTGCTGCCGCCCTGCTGCTACATAAACTGCCGCTGCTGCTGTTTCGAGGAGGCGCCGCCGCTCCCGTCGCCGTCGTCGCTCGAAAGT
CGTTCGTGGCTTCGGATTGGGCAAAAAATTGTAGAAAACAGCGAAGAAGACGAAGTAGACTGCGCCGATAGTGCCATCGCGCTATGCAGCAGCGCCATGGCGCTACGGGG
ACAGCACAAAGCGCCACGGCGCTGCACTATAGCGTCGCGGCGCCGTGCAGCGCCATGGCGCCATGCCAGGGTGCCGCAGTGCTGCTGCTGCAGCAGCGCCGTGGCGCTGC
CCTTAGGCGCCGAGGCGCTGTCCCGGGTGTCTTTCGACGCGGTTCCGAGGCTTCGGTTCGCGGATCGAGGGGGGATGCACAACCATCCCTACGGAGGGTTCATTGTATGG
AAATCAAAACCAAGGCAAACTCCAGAAATGGATAGGAGTCTCTTAGAGGATTGTCTTAAAGCTCCTGCGCCTAACGCCACTGTGGCGGTGCGCAACGTCGATGACAGGTG
GATCAAGGCCAATGACAAGGCCAAAGTCTACATCATGGCGAGCATATCTGATGTGCTTTGTAAGAAGCACGAGGACACGGTCACCGCTAAGGAGATCATGGACTCGCTGT
AG
Protein sequenceShow/hide protein sequence
MWSPPNVLNTAVTHKSCRRSCCSSDGSSRSSRFAADLTRSSCAAVTTRSPCAAAKRSGAGSLQTVGERVAAAADRRDVEEVVLPPCCYINCRCCCFEEAPPLPSPSSLES
RSWLRIGQKIVENSEEDEVDCADSAIALCSSAMALRGQHKAPRRCTIASRRRAAPWRHARVPQCCCCSSAVALPLGAEALSRVSFDAVPRLRFADRGGMHNHPYGGFIVW
KSKPRQTPEMDRSLLEDCLKAPAPNATVAVRNVDDRWIKANDKAKVYIMASISDVLCKKHEDTVTAKEIMDSL