CuGenDBv2

Gene ID	Moc01g04380
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Gag/pol protein
Genome location	chr1:2865011..2872315
RNA-Seq Expression	Moc01g04380
Synteny	Moc01g04380
Gene Ontology terms	GO:0006807 - nitrogen compound metabolic process (biological process) GO:0043170 - macromolecule metabolic process (biological process) GO:0044238 - primary metabolic process (biological process) GO:0005488 - binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0035879.1 gag/pol protein [Cucumis melo var. makuwa]

4.6e-71

64.5

Show/hide

Query:  MKEGSLVREHVLNLMVHFNVAQSNGAVIDEQSQVSFILESLPKSFLPFRSNAIMNKLEYTLTTLLNELQTYQ----------------------------
        M EG+ VREHVLN+MVHFNVA+ NGAVIDE SQVSFILESLP+SFL FRSNA+MNK+ YTLTTLLNELQT++                            
Subjt:  MKEGSLVREHVLNLMVHFNVAQSNGAVIDEQSQVSFILESLPKSFLPFRSNAIMNKLEYTLTTLLNELQTYQ----------------------------

Query:  --SAPSSSGSKTCNKKKVAGKGSKPDSVTAAQKGKVKVAGKGKCFHCSMDGHWKRNYPKYLAEKKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVC
          S PSSSG+K   KKK  G+G+K  ++ AA+  K   A KG CFHC+ +GHWKRN PKYLAEKKKA +GKYDLLVLETCLVENDDSAWI+DSGATNHVC
Subjt:  --SAPSSSGSKTCNKKKVAGKGSKPDSVTAAQKGKVKVAGKGKCFHCSMDGHWKRNYPKYLAEKKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVC

Query:  SSFQGMSSWKQLDSGERTLKVGTGEVVSAVA
        SSFQG+SSW+QL++GE T++VGTG VVSA+A
Subjt:  SSFQGMSSWKQLDSGERTLKVGTGEVVSAVA

KAA0047792.1 gag/pol protein [Cucumis melo var. makuwa]

4.6e-71

64.5

Show/hide

Query:  MKEGSLVREHVLNLMVHFNVAQSNGAVIDEQSQVSFILESLPKSFLPFRSNAIMNKLEYTLTTLLNELQTYQ----------------------------
        M EG+ VREHVLN+MVHFNVA+ NGAVIDE SQVSFILESLP+SFL FRSNA+MNK+ YTLTTLLNELQT++                            
Subjt:  MKEGSLVREHVLNLMVHFNVAQSNGAVIDEQSQVSFILESLPKSFLPFRSNAIMNKLEYTLTTLLNELQTYQ----------------------------

Query:  --SAPSSSGSKTCNKKKVAGKGSKPDSVTAAQKGKVKVAGKGKCFHCSMDGHWKRNYPKYLAEKKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVC
          S PSSSG+K   KKK  G+G+K  ++ AA+  K   A KG CFHC+ +GHWKRN PKYLAEKKKA +GKYDLLVLETCLVENDDSAWI+DSGATNHVC
Subjt:  --SAPSSSGSKTCNKKKVAGKGSKPDSVTAAQKGKVKVAGKGKCFHCSMDGHWKRNYPKYLAEKKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVC

Query:  SSFQGMSSWKQLDSGERTLKVGTGEVVSAVA
        SSFQG+SSW+QL++GE T++VGTG VVSA+A
Subjt:  SSFQGMSSWKQLDSGERTLKVGTGEVVSAVA

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]

4.6e-71

64.5

Show/hide

Query:  MKEGSLVREHVLNLMVHFNVAQSNGAVIDEQSQVSFILESLPKSFLPFRSNAIMNKLEYTLTTLLNELQTYQ----------------------------
        M EG+ VREHVLN+MVHFNVA+ NGAVIDE SQVSFILESLP+SFL FRSNA+MNK+ YTLTTLLNELQT++                            
Subjt:  MKEGSLVREHVLNLMVHFNVAQSNGAVIDEQSQVSFILESLPKSFLPFRSNAIMNKLEYTLTTLLNELQTYQ----------------------------

Query:  --SAPSSSGSKTCNKKKVAGKGSKPDSVTAAQKGKVKVAGKGKCFHCSMDGHWKRNYPKYLAEKKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVC
          S PSSSG+K   KKK  G+G+K  ++ AA+  K   A KG CFHC+ +GHWKRN PKYLAEKKKA +GKYDLLVLETCLVENDDSAWI+DSGATNHVC
Subjt:  --SAPSSSGSKTCNKKKVAGKGSKPDSVTAAQKGKVKVAGKGKCFHCSMDGHWKRNYPKYLAEKKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVC

Query:  SSFQGMSSWKQLDSGERTLKVGTGEVVSAVA
        SSFQG+SSW+QL++GE T++VGTG VVSA+A
Subjt:  SSFQGMSSWKQLDSGERTLKVGTGEVVSAVA

KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]

4.6e-71

64.5

Show/hide

Query:  MKEGSLVREHVLNLMVHFNVAQSNGAVIDEQSQVSFILESLPKSFLPFRSNAIMNKLEYTLTTLLNELQTYQ----------------------------
        M EG+ VREHVLN+MVHFNVA+ NGAVIDE SQVSFILESLP+SFL FRSNA+MNK+ YTLTTLLNELQT++                            
Subjt:  MKEGSLVREHVLNLMVHFNVAQSNGAVIDEQSQVSFILESLPKSFLPFRSNAIMNKLEYTLTTLLNELQTYQ----------------------------

Query:  --SAPSSSGSKTCNKKKVAGKGSKPDSVTAAQKGKVKVAGKGKCFHCSMDGHWKRNYPKYLAEKKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVC
          S PSSSG+K   KKK  G+G+K  ++ AA+  K   A KG CFHC+ +GHWKRN PKYLAEKKKA +GKYDLLVLETCLVENDDSAWI+DSGATNHVC
Subjt:  --SAPSSSGSKTCNKKKVAGKGSKPDSVTAAQKGKVKVAGKGKCFHCSMDGHWKRNYPKYLAEKKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVC

Query:  SSFQGMSSWKQLDSGERTLKVGTGEVVSAVA
        SSFQG+SSW+QL++GE T++VGTG VVSA+A
Subjt:  SSFQGMSSWKQLDSGERTLKVGTGEVVSAVA

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]

4.6e-71

64.5

Show/hide

Query:  MKEGSLVREHVLNLMVHFNVAQSNGAVIDEQSQVSFILESLPKSFLPFRSNAIMNKLEYTLTTLLNELQTYQ----------------------------
        M EG+ VREHVLN+MVHFNVA+ NGAVIDE SQVSFILESLP+SFL FRSNA+MNK+ YTLTTLLNELQT++                            
Subjt:  MKEGSLVREHVLNLMVHFNVAQSNGAVIDEQSQVSFILESLPKSFLPFRSNAIMNKLEYTLTTLLNELQTYQ----------------------------

Query:  --SAPSSSGSKTCNKKKVAGKGSKPDSVTAAQKGKVKVAGKGKCFHCSMDGHWKRNYPKYLAEKKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVC
          S PSSSG+K   KKK  G+G+K  ++ AA+  K   A KG CFHC+ +GHWKRN PKYLAEKKKA +GKYDLLVLETCLVENDDSAWI+DSGATNHVC
Subjt:  --SAPSSSGSKTCNKKKVAGKGSKPDSVTAAQKGKVKVAGKGKCFHCSMDGHWKRNYPKYLAEKKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVC

Query:  SSFQGMSSWKQLDSGERTLKVGTGEVVSAVA
        SSFQG+SSW+QL++GE T++VGTG VVSA+A
Subjt:  SSFQGMSSWKQLDSGERTLKVGTGEVVSAVA

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SMH8 Gag/pol protein

2.2e-71

64.5

Show/hide

Query:  MKEGSLVREHVLNLMVHFNVAQSNGAVIDEQSQVSFILESLPKSFLPFRSNAIMNKLEYTLTTLLNELQTYQ----------------------------
        M EG+ VREHVLN+MVHFNVA+ NGAVIDE SQVSFILESLP+SFL FRSNA+MNK+ YTLTTLLNELQT++                            
Subjt:  MKEGSLVREHVLNLMVHFNVAQSNGAVIDEQSQVSFILESLPKSFLPFRSNAIMNKLEYTLTTLLNELQTYQ----------------------------

Query:  --SAPSSSGSKTCNKKKVAGKGSKPDSVTAAQKGKVKVAGKGKCFHCSMDGHWKRNYPKYLAEKKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVC
          S PSSSG+K   KKK  G+G+K  ++ AA+  K   A KG CFHC+ +GHWKRN PKYLAEKKKA +GKYDLLVLETCLVENDDSAWI+DSGATNHVC
Subjt:  --SAPSSSGSKTCNKKKVAGKGSKPDSVTAAQKGKVKVAGKGKCFHCSMDGHWKRNYPKYLAEKKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVC

Query:  SSFQGMSSWKQLDSGERTLKVGTGEVVSAVA
        SSFQG+SSW+QL++GE T++VGTG VVSA+A
Subjt:  SSFQGMSSWKQLDSGERTLKVGTGEVVSAVA

A0A5A7TWB9 Gag/pol protein

2.2e-71

64.5

Show/hide

Query:  MKEGSLVREHVLNLMVHFNVAQSNGAVIDEQSQVSFILESLPKSFLPFRSNAIMNKLEYTLTTLLNELQTYQ----------------------------
        M EG+ VREHVLN+MVHFNVA+ NGAVIDE SQVSFILESLP+SFL FRSNA+MNK+ YTLTTLLNELQT++                            
Subjt:  MKEGSLVREHVLNLMVHFNVAQSNGAVIDEQSQVSFILESLPKSFLPFRSNAIMNKLEYTLTTLLNELQTYQ----------------------------

Query:  --SAPSSSGSKTCNKKKVAGKGSKPDSVTAAQKGKVKVAGKGKCFHCSMDGHWKRNYPKYLAEKKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVC
          S PSSSG+K   KKK  G+G+K  ++ AA+  K   A KG CFHC+ +GHWKRN PKYLAEKKKA +GKYDLLVLETCLVENDDSAWI+DSGATNHVC
Subjt:  --SAPSSSGSKTCNKKKVAGKGSKPDSVTAAQKGKVKVAGKGKCFHCSMDGHWKRNYPKYLAEKKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVC

Query:  SSFQGMSSWKQLDSGERTLKVGTGEVVSAVA
        SSFQG+SSW+QL++GE T++VGTG VVSA+A
Subjt:  SSFQGMSSWKQLDSGERTLKVGTGEVVSAVA

A0A5A7V4M1 Gag/pol protein

2.2e-71

64.5

Show/hide

Query:  MKEGSLVREHVLNLMVHFNVAQSNGAVIDEQSQVSFILESLPKSFLPFRSNAIMNKLEYTLTTLLNELQTYQ----------------------------
        M EG+ VREHVLN+MVHFNVA+ NGAVIDE SQVSFILESLP+SFL FRSNA+MNK+ YTLTTLLNELQT++                            
Subjt:  MKEGSLVREHVLNLMVHFNVAQSNGAVIDEQSQVSFILESLPKSFLPFRSNAIMNKLEYTLTTLLNELQTYQ----------------------------

Query:  --SAPSSSGSKTCNKKKVAGKGSKPDSVTAAQKGKVKVAGKGKCFHCSMDGHWKRNYPKYLAEKKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVC
          S PSSSG+K   KKK  G+G+K  ++ AA+  K   A KG CFHC+ +GHWKRN PKYLAEKKKA +GKYDLLVLETCLVENDDSAWI+DSGATNHVC
Subjt:  --SAPSSSGSKTCNKKKVAGKGSKPDSVTAAQKGKVKVAGKGKCFHCSMDGHWKRNYPKYLAEKKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVC

Query:  SSFQGMSSWKQLDSGERTLKVGTGEVVSAVA
        SSFQG+SSW+QL++GE T++VGTG VVSA+A
Subjt:  SSFQGMSSWKQLDSGERTLKVGTGEVVSAVA

A0A5D3CPJ6 Gag/pol protein

2.2e-71

64.5

Show/hide

Query:  MKEGSLVREHVLNLMVHFNVAQSNGAVIDEQSQVSFILESLPKSFLPFRSNAIMNKLEYTLTTLLNELQTYQ----------------------------
        M EG+ VREHVLN+MVHFNVA+ NGAVIDE SQVSFILESLP+SFL FRSNA+MNK+ YTLTTLLNELQT++                            
Subjt:  MKEGSLVREHVLNLMVHFNVAQSNGAVIDEQSQVSFILESLPKSFLPFRSNAIMNKLEYTLTTLLNELQTYQ----------------------------

Query:  --SAPSSSGSKTCNKKKVAGKGSKPDSVTAAQKGKVKVAGKGKCFHCSMDGHWKRNYPKYLAEKKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVC
          S PSSSG+K   KKK  G+G+K  ++ AA+  K   A KG CFHC+ +GHWKRN PKYLAEKKKA +GKYDLLVLETCLVENDDSAWI+DSGATNHVC
Subjt:  --SAPSSSGSKTCNKKKVAGKGSKPDSVTAAQKGKVKVAGKGKCFHCSMDGHWKRNYPKYLAEKKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVC

Query:  SSFQGMSSWKQLDSGERTLKVGTGEVVSAVA
        SSFQG+SSW+QL++GE T++VGTG VVSA+A
Subjt:  SSFQGMSSWKQLDSGERTLKVGTGEVVSAVA

A0A5D3CSZ6 Gag/pol protein

2.2e-71

64.5

Show/hide

Query:  MKEGSLVREHVLNLMVHFNVAQSNGAVIDEQSQVSFILESLPKSFLPFRSNAIMNKLEYTLTTLLNELQTYQ----------------------------
        M EG+ VREHVLN+MVHFNVA+ NGAVIDE SQVSFILESLP+SFL FRSNA+MNK+ YTLTTLLNELQT++                            
Subjt:  MKEGSLVREHVLNLMVHFNVAQSNGAVIDEQSQVSFILESLPKSFLPFRSNAIMNKLEYTLTTLLNELQTYQ----------------------------

Query:  --SAPSSSGSKTCNKKKVAGKGSKPDSVTAAQKGKVKVAGKGKCFHCSMDGHWKRNYPKYLAEKKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVC
          S PSSSG+K   KKK  G+G+K  ++ AA+  K   A KG CFHC+ +GHWKRN PKYLAEKKKA +GKYDLLVLETCLVENDDSAWI+DSGATNHVC
Subjt:  --SAPSSSGSKTCNKKKVAGKGSKPDSVTAAQKGKVKVAGKGKCFHCSMDGHWKRNYPKYLAEKKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVC

Query:  SSFQGMSSWKQLDSGERTLKVGTGEVVSAVA
        SSFQG+SSW+QL++GE T++VGTG VVSA+A
Subjt:  SSFQGMSSWKQLDSGERTLKVGTGEVVSAVA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAGGAGGGCTCCTTAGTGCGAGAACACGTTCTCAACCTGATGGTCCACTTCAACGTGGCTCAGTCGAACGGGGCCGTCATAGACGAGCAGAGTCAGGTCAGCTTCAT
TCTGGAATCTCTTCCGAAGAGTTTCCTACCATTTCGCAGCAATGCGATTATGAATAAGCTGGAGTACACTCTTACCACGCTCCTAAACGAGCTGCAGACCTACCAGTCTG
CGCCCTCTTCTTCTGGAAGTAAGACTTGTAATAAGAAGAAGGTTGCTGGTAAGGGGTCTAAACCTGACTCAGTTACTGCTGCACAGAAAGGCAAGGTCAAGGTTGCAGGG
AAAGGAAAGTGTTTCCACTGCAGTATGGACGGTCATTGGAAGCGCAACTACCCAAAGTACTTGGCTGAAAAGAAGAAAGCCAACGAAGGTAAATATGATTTACTTGTATT
GGAAACATGTTTAGTGGAGAATGATGACTCCGCCTGGATACTGGATTCAGGAGCCACTAATCACGTTTGTTCTTCATTTCAGGGAATGAGTTCCTGGAAGCAGCTTGACT
CCGGAGAGAGGACTCTCAAGGTCGGAACGGGAGAGGTCGTCTCAGCTGTGGCGGGTAGCCGTCGCACGCTGCTGTCATGCATGGAAACGCCACCCGCTACACGCTGCTGT
CCCAAACAGTCCACTGCACCTGCTGCCGTGGGTTCAGTTGTCATGCCGCCGCTGGGTGAGACCGTCGGAGAATGGGTTTGCCGGAGGACTACCGACGGTGGTCATGAAAC
AGCACAAAGGTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MKEGSLVREHVLNLMVHFNVAQSNGAVIDEQSQVSFILESLPKSFLPFRSNAIMNKLEYTLTTLLNELQTYQSAPSSSGSKTCNKKKVAGKGSKPDSVTAAQKGKVKVAG
KGKCFHCSMDGHWKRNYPKYLAEKKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVCSSFQGMSSWKQLDSGERTLKVGTGEVVSAVAGSRRTLLSCMETPPATRCC
PKQSTAPAAVGSVVMPPLGETVGEWVCRRTTDGGHETAQR

Moc01g04380 (gene) of Bitter gourd (OHB3-1) v2 genome