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Moc01g04390 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g04390
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr1:2875411..2877897
RNA-Seq ExpressionMoc01g04390
SyntenyMoc01g04390
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156328.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111023249 [Momordica charantia]2.6e-1991.8Show/hide
Query:  MHSELERLEVELTVDDVSALLAQLSVEPSLRQRIIVAQKEDPSLAKGFSMKGHGDFTLLGE
        MHSELE  EVELTVDDVSALLA+LSVEPSLRQRIIVAQKEDPSLAKGFSM GHGDFTL GE
Subjt:  MHSELERLEVELTVDDVSALLAQLSVEPSLRQRIIVAQKEDPSLAKGFSMKGHGDFTLLGE

XP_022156880.1 uncharacterized protein LOC111023714 [Momordica charantia]6.1e-1372.41Show/hide
Query:  ELERLEVELTVDDVSALLAQLSVEPSLRQRIIVAQKEDPSLAKGFSMKGHGDFTLLGE
        EL+R EVEL V+DVSA+LA+LSVEP+LRQR+I AQ+ DPSL+KGFSM G GDF+LLG+
Subjt:  ELERLEVELTVDDVSALLAQLSVEPSLRQRIIVAQKEDPSLAKGFSMKGHGDFTLLGE

XP_022157022.1 uncharacterized protein LOC111023849 [Momordica charantia]8.0e-1391.84Show/hide
Query:  MHSELERLEVELTVDDVSALLAQLSVEPSLRQRIIVAQKEDPSLAKGFS
        MHSELE LEVELTVDDVSA LA+LS+EPSLRQRIIVAQKEDPSLAKGFS
Subjt:  MHSELERLEVELTVDDVSALLAQLSVEPSLRQRIIVAQKEDPSLAKGFS

XP_022157823.1 uncharacterized protein LOC111024441 [Momordica charantia]2.0e-1990.16Show/hide
Query:  MHSELERLEVELTVDDVSALLAQLSVEPSLRQRIIVAQKEDPSLAKGFSMKGHGDFTLLGE
        +HSELERLEVELT+DDV ALLA+LSVEPSLRQRIIVAQKEDPSLAKGFSM GHGDFTL GE
Subjt:  MHSELERLEVELTVDDVSALLAQLSVEPSLRQRIIVAQKEDPSLAKGFSMKGHGDFTLLGE

XP_022157851.1 uncharacterized protein LOC111024467 [Momordica charantia]3.1e-0934.91Show/hide
Query:  ELERLEVELTVDDVSALLAQLSVEPSLRQRIIVAQKEDPSLAKGFSMKG----------------------HGDFTL-----------------------
        EL+R EVEL V+DV+ +LA+LSVEP+LRQRII AQK DPSL + F M+G                      H  F +                       
Subjt:  ELERLEVELTVDDVSALLAQLSVEPSLRQRIIVAQKEDPSLAKGFSMKG----------------------HGDFTL-----------------------

Query:  -LGE-------------------------------------EREDDIKARYPELLEQSTFGDESFLRGK
         LG                                      ERED+IKARYPEL +Q TF DESFLRG+
Subjt:  -LGE-------------------------------------EREDDIKARYPELLEQSTFGDESFLRGK

TrEMBL top hitse value%identityAlignment
A0A6J1DQB9 Reverse transcriptase1.2e-1991.8Show/hide
Query:  MHSELERLEVELTVDDVSALLAQLSVEPSLRQRIIVAQKEDPSLAKGFSMKGHGDFTLLGE
        MHSELE  EVELTVDDVSALLA+LSVEPSLRQRIIVAQKEDPSLAKGFSM GHGDFTL GE
Subjt:  MHSELERLEVELTVDDVSALLAQLSVEPSLRQRIIVAQKEDPSLAKGFSMKGHGDFTLLGE

A0A6J1DRK1 uncharacterized protein LOC1110237143.0e-1372.41Show/hide
Query:  ELERLEVELTVDDVSALLAQLSVEPSLRQRIIVAQKEDPSLAKGFSMKGHGDFTLLGE
        EL+R EVEL V+DVSA+LA+LSVEP+LRQR+I AQ+ DPSL+KGFSM G GDF+LLG+
Subjt:  ELERLEVELTVDDVSALLAQLSVEPSLRQRIIVAQKEDPSLAKGFSMKGHGDFTLLGE

A0A6J1DTG8 Reverse transcriptase3.9e-1391.84Show/hide
Query:  MHSELERLEVELTVDDVSALLAQLSVEPSLRQRIIVAQKEDPSLAKGFS
        MHSELE LEVELTVDDVSA LA+LS+EPSLRQRIIVAQKEDPSLAKGFS
Subjt:  MHSELERLEVELTVDDVSALLAQLSVEPSLRQRIIVAQKEDPSLAKGFS

A0A6J1DUE8 uncharacterized protein LOC1110244419.5e-2090.16Show/hide
Query:  MHSELERLEVELTVDDVSALLAQLSVEPSLRQRIIVAQKEDPSLAKGFSMKGHGDFTLLGE
        +HSELERLEVELT+DDV ALLA+LSVEPSLRQRIIVAQKEDPSLAKGFSM GHGDFTL GE
Subjt:  MHSELERLEVELTVDDVSALLAQLSVEPSLRQRIIVAQKEDPSLAKGFSMKGHGDFTLLGE

A0A6J1DZD5 uncharacterized protein LOC1110244671.5e-0934.91Show/hide
Query:  ELERLEVELTVDDVSALLAQLSVEPSLRQRIIVAQKEDPSLAKGFSMKG----------------------HGDFTL-----------------------
        EL+R EVEL V+DV+ +LA+LSVEP+LRQRII AQK DPSL + F M+G                      H  F +                       
Subjt:  ELERLEVELTVDDVSALLAQLSVEPSLRQRIIVAQKEDPSLAKGFSMKG----------------------HGDFTL-----------------------

Query:  -LGE-------------------------------------EREDDIKARYPELLEQSTFGDESFLRGK
         LG                                      ERED+IKARYPEL +Q TF DESFLRG+
Subjt:  -LGE-------------------------------------EREDDIKARYPELLEQSTFGDESFLRGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACAGCGAGTTGGAACGCTTAGAGGTAGAGTTGACGGTGGATGATGTCTCCGCGCTGTTGGCTCAACTCTCGGTGGAACCCAGTCTGAGGCAGAGGATCATT
GTTGCCCAAAAGGAAGACCCTAGCTTGGCCAAAGGCTTTAGTATGAAGGGCCATGGGGATTTCACTCTCTTGGGTGAGGAGCGGGAGGACGATATCAAGGCGAGG
TACCCTGAACTGCTAGAACAGTCAACTTTCGGGGACGAAAGTTTTTTAAGGGGGAAGTCTGCAACGCCCCGAGTCCTTCAGCCGGCGGCTCCTTCTTCTCTGGCG
AAGCGGCACGGCAGCAGCAGTGAGCCCCACGCCGGCGTCCTCCCGCAGCAGCTCGCGGCAGCGCACAAACGACGGTTTCCACTGCGGCCGCGTTCGTCAGATCCG
CGACGACCCACCCGATTTCGGCCCCATATGAACGGGTCTGTTGGAGTTCGACGGTCGGTGACAAGCTCGGGTCGGATCCGGCAGTACAACAGCATCTCCATGGCG
GCGCGACGGTTTCTGCACCACCCTGCGGCGCTACTCGCGGCGGTGTGCGACGAGCGGCGTTCCTTCACGGCGGCGCACGATGCACAGGTCAGCTCCACGGTGGTC
CCGACGACCTGCTGCTACAACCTCAACCCCGGGGACGTGCGCAACTCCCGACGGCTGCCTCCGACGAACAGCAGCTTCGGCGACTCGTTCTTTTTGCAATCCGAC
GTGAACAGTAGCAGATTCACGAAGACGTCTTCATTCCGATACATTTTGGCATTTACCCACACTCAAACGAAGCTTGATTTGAGTTATCCATCCCCTCCAACACTG
TTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCACAGCGAGTTGGAACGCTTAGAGGTAGAGTTGACGGTGGATGATGTCTCCGCGCTGTTGGCTCAACTCTCGGTGGAACCCAGTCTGAGGCAGAGGATCATT
GTTGCCCAAAAGGAAGACCCTAGCTTGGCCAAAGGCTTTAGTATGAAGGGCCATGGGGATTTCACTCTCTTGGGTGAGGAGCGGGAGGACGATATCAAGGCGAGG
TACCCTGAACTGCTAGAACAGTCAACTTTCGGGGACGAAAGTTTTTTAAGGGGGAAGTCTGCAACGCCCCGAGTCCTTCAGCCGGCGGCTCCTTCTTCTCTGGCG
AAGCGGCACGGCAGCAGCAGTGAGCCCCACGCCGGCGTCCTCCCGCAGCAGCTCGCGGCAGCGCACAAACGACGGTTTCCACTGCGGCCGCGTTCGTCAGATCCG
CGACGACCCACCCGATTTCGGCCCCATATGAACGGGTCTGTTGGAGTTCGACGGTCGGTGACAAGCTCGGGTCGGATCCGGCAGTACAACAGCATCTCCATGGCG
GCGCGACGGTTTCTGCACCACCCTGCGGCGCTACTCGCGGCGGTGTGCGACGAGCGGCGTTCCTTCACGGCGGCGCACGATGCACAGGTCAGCTCCACGGTGGTC
CCGACGACCTGCTGCTACAACCTCAACCCCGGGGACGTGCGCAACTCCCGACGGCTGCCTCCGACGAACAGCAGCTTCGGCGACTCGTTCTTTTTGCAATCCGAC
GTGAACAGTAGCAGATTCACGAAGACGTCTTCATTCCGATACATTTTGGCATTTACCCACACTCAAACGAAGCTTGATTTGAGTTATCCATCCCCTCCAACACTG
TTTTGA
Protein sequenceShow/hide protein sequence
MHSELERLEVELTVDDVSALLAQLSVEPSLRQRIIVAQKEDPSLAKGFSMKGHGDFTLLGEEREDDIKARYPELLEQSTFGDESFLRGKSATPRVLQPAAPSSLA
KRHGSSSEPHAGVLPQQLAAAHKRRFPLRPRSSDPRRPTRFRPHMNGSVGVRRSVTSSGRIRQYNSISMAARRFLHHPAALLAAVCDERRSFTAAHDAQVSSTVV
PTTCCYNLNPGDVRNSRRLPPTNSSFGDSFFLQSDVNSSRFTKTSSFRYILAFTHTQTKLDLSYPSPPTLF