; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc01g04490 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g04490
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr1:2966278..2966758
RNA-Seq ExpressionMoc01g04490
SyntenyMoc01g04490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]5.8e-4360.38Show/hide
Query:  MGEKVPPKFKLPVIKQYDGSVDPVDHLDTYCEWMDIYGVIEAIRCLVFSFTLSGSVRVWFRQLKRGSSGS------------------------------
        M EKVPPKFKLP IK+YDGS DP+DHLD Y EW DIYG+ EAIRC VFSFTL+GS R+WF+QLKR S  S                              
Subjt:  MGEKVPPKFKLPVIKQYDGSVDPVDHLDTYCEWMDIYGVIEAIRCLVFSFTLSGSVRVWFRQLKRGSSGS------------------------------

Query:  RTIESLKDYVARFNEEKLQVEGLTDTMSLLVFMSGVKDEHFAFSFGKKTSSTFSEALSQ
        +  ESLKDYVARFN+EKLQVEGLTD + LLVF+SGVKDE   FSFGK+TS TFSEA S+
Subjt:  RTIESLKDYVARFNEEKLQVEGLTDTMSLLVFMSGVKDEHFAFSFGKKTSSTFSEALSQ

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]5.8e-4361.01Show/hide
Query:  MGEKVPPKFKLPVIKQYDGSVDPVDHLDTYCEWMDIYGVIEAIRCLVFSFTLSGSVRVWFRQLKRGSSGS------------------------------
        M  KVPPKFKLP +KQ+DG+VD VDHLD Y EWMDIYGV EA++C VFS TLSGS RVWFRQLKRGS  S                              
Subjt:  MGEKVPPKFKLPVIKQYDGSVDPVDHLDTYCEWMDIYGVIEAIRCLVFSFTLSGSVRVWFRQLKRGSSGS------------------------------

Query:  RTIESLKDYVARFNEEKLQVEGLTDTMSLLVFMSGVKDEHFAFSFGKKTSSTFSEALSQ
        R  ESL DYVARFNEEKLQVEGLT+ +SL+ FMS ++DEH +FSFGKKT STFSEALS+
Subjt:  RTIESLKDYVARFNEEKLQVEGLTDTMSLLVFMSGVKDEHFAFSFGKKTSSTFSEALSQ

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]5.1e-3956.6Show/hide
Query:  MGEKVPPKFKLPVIKQYDGSVDPVDHLDTYCEWMDIYGVIEAIRCLVFSFTLSGSVRVWFRQLKRGSSGS------------------------------
        M EK  PKFKLP I +YDGS DP+DHLD Y EW DIY + EAIRC VFSFTL+GS R WFRQLKR S  S                              
Subjt:  MGEKVPPKFKLPVIKQYDGSVDPVDHLDTYCEWMDIYGVIEAIRCLVFSFTLSGSVRVWFRQLKRGSSGS------------------------------

Query:  RTIESLKDYVARFNEEKLQVEGLTDTMSLLVFMSGVKDEHFAFSFGKKTSSTFSEALSQ
        +  ESLK+YVARFNEEKLQVEGLTD ++L+ F+SGVKDE   FSFGK+T  TF EALS+
Subjt:  RTIESLKDYVARFNEEKLQVEGLTDTMSLLVFMSGVKDEHFAFSFGKKTSSTFSEALSQ

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.6e-4562.26Show/hide
Query:  MGEKVPPKFKLPVIKQYDGSVDPVDHLDTYCEWMDIYGVIEAIRCLVFSFTLSGSVRVWFRQLKRGSSGS------------------------------
        M EKVPPKFKLP +KQ+D + DPVDHLD Y EWMDIYGV EA+RC VFS TL+GS R+WFRQLKRGS  S                              
Subjt:  MGEKVPPKFKLPVIKQYDGSVDPVDHLDTYCEWMDIYGVIEAIRCLVFSFTLSGSVRVWFRQLKRGSSGS------------------------------

Query:  RTIESLKDYVARFNEEKLQVEGLTDTMSLLVFMSGVKDEHFAFSFGKKTSSTFSEALSQ
        RT ESL+DYVARFNEEKLQVEGLTD +SLL FMSGV+DEH +FSFGK+T +TFSEALS+
Subjt:  RTIESLKDYVARFNEEKLQVEGLTDTMSLLVFMSGVKDEHFAFSFGKKTSSTFSEALSQ

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]2.0e-4361.01Show/hide
Query:  MGEKVPPKFKLPVIKQYDGSVDPVDHLDTYCEWMDIYGVIEAIRCLVFSFTLSGSVRVWFRQLKRGSSGS------------------------------
        M EKVPPKFKLP +K +DG  +PVDHLD Y EWMDIYGV +AIRC VFS TL+GS R+WFRQLKRGS  S                              
Subjt:  MGEKVPPKFKLPVIKQYDGSVDPVDHLDTYCEWMDIYGVIEAIRCLVFSFTLSGSVRVWFRQLKRGSSGS------------------------------

Query:  RTIESLKDYVARFNEEKLQVEGLTDTMSLLVFMSGVKDEHFAFSFGKKTSSTFSEALSQ
        RT ESL DYVARFNEEKLQ+EGLTD +SLL FMSGV+DEH +FSF K+T STFSEALS+
Subjt:  RTIESLKDYVARFNEEKLQVEGLTDTMSLLVFMSGVKDEHFAFSFGKKTSSTFSEALSQ

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166192.8e-4360.38Show/hide
Query:  MGEKVPPKFKLPVIKQYDGSVDPVDHLDTYCEWMDIYGVIEAIRCLVFSFTLSGSVRVWFRQLKRGSSGS------------------------------
        M EKVPPKFKLP IK+YDGS DP+DHLD Y EW DIYG+ EAIRC VFSFTL+GS R+WF+QLKR S  S                              
Subjt:  MGEKVPPKFKLPVIKQYDGSVDPVDHLDTYCEWMDIYGVIEAIRCLVFSFTLSGSVRVWFRQLKRGSSGS------------------------------

Query:  RTIESLKDYVARFNEEKLQVEGLTDTMSLLVFMSGVKDEHFAFSFGKKTSSTFSEALSQ
        +  ESLKDYVARFN+EKLQVEGLTD + LLVF+SGVKDE   FSFGK+TS TFSEA S+
Subjt:  RTIESLKDYVARFNEEKLQVEGLTDTMSLLVFMSGVKDEHFAFSFGKKTSSTFSEALSQ

A0A6J1D7D2 uncharacterized protein LOC1110183072.8e-4361.01Show/hide
Query:  MGEKVPPKFKLPVIKQYDGSVDPVDHLDTYCEWMDIYGVIEAIRCLVFSFTLSGSVRVWFRQLKRGSSGS------------------------------
        M  KVPPKFKLP +KQ+DG+VD VDHLD Y EWMDIYGV EA++C VFS TLSGS RVWFRQLKRGS  S                              
Subjt:  MGEKVPPKFKLPVIKQYDGSVDPVDHLDTYCEWMDIYGVIEAIRCLVFSFTLSGSVRVWFRQLKRGSSGS------------------------------

Query:  RTIESLKDYVARFNEEKLQVEGLTDTMSLLVFMSGVKDEHFAFSFGKKTSSTFSEALSQ
        R  ESL DYVARFNEEKLQVEGLT+ +SL+ FMS ++DEH +FSFGKKT STFSEALS+
Subjt:  RTIESLKDYVARFNEEKLQVEGLTDTMSLLVFMSGVKDEHFAFSFGKKTSSTFSEALSQ

A0A6J1DWY0 uncharacterized protein LOC1110252938.0e-4662.26Show/hide
Query:  MGEKVPPKFKLPVIKQYDGSVDPVDHLDTYCEWMDIYGVIEAIRCLVFSFTLSGSVRVWFRQLKRGSSGS------------------------------
        M EKVPPKFKLP +KQ+D + DPVDHLD Y EWMDIYGV EA+RC VFS TL+GS R+WFRQLKRGS  S                              
Subjt:  MGEKVPPKFKLPVIKQYDGSVDPVDHLDTYCEWMDIYGVIEAIRCLVFSFTLSGSVRVWFRQLKRGSSGS------------------------------

Query:  RTIESLKDYVARFNEEKLQVEGLTDTMSLLVFMSGVKDEHFAFSFGKKTSSTFSEALSQ
        RT ESL+DYVARFNEEKLQVEGLTD +SLL FMSGV+DEH +FSFGK+T +TFSEALS+
Subjt:  RTIESLKDYVARFNEEKLQVEGLTDTMSLLVFMSGVKDEHFAFSFGKKTSSTFSEALSQ

A0A6J1DZ49 uncharacterized protein LOC1110248512.5e-3956.6Show/hide
Query:  MGEKVPPKFKLPVIKQYDGSVDPVDHLDTYCEWMDIYGVIEAIRCLVFSFTLSGSVRVWFRQLKRGSSGS------------------------------
        M EK  PKFKLP I +YDGS DP+DHLD Y EW DIY + EAIRC VFSFTL+GS R WFRQLKR S  S                              
Subjt:  MGEKVPPKFKLPVIKQYDGSVDPVDHLDTYCEWMDIYGVIEAIRCLVFSFTLSGSVRVWFRQLKRGSSGS------------------------------

Query:  RTIESLKDYVARFNEEKLQVEGLTDTMSLLVFMSGVKDEHFAFSFGKKTSSTFSEALSQ
        +  ESLK+YVARFNEEKLQVEGLTD ++L+ F+SGVKDE   FSFGK+T  TF EALS+
Subjt:  RTIESLKDYVARFNEEKLQVEGLTDTMSLLVFMSGVKDEHFAFSFGKKTSSTFSEALSQ

A0A6J1E1E7 uncharacterized protein LOC1110255489.7e-4461.01Show/hide
Query:  MGEKVPPKFKLPVIKQYDGSVDPVDHLDTYCEWMDIYGVIEAIRCLVFSFTLSGSVRVWFRQLKRGSSGS------------------------------
        M EKVPPKFKLP +K +DG  +PVDHLD Y EWMDIYGV +AIRC VFS TL+GS R+WFRQLKRGS  S                              
Subjt:  MGEKVPPKFKLPVIKQYDGSVDPVDHLDTYCEWMDIYGVIEAIRCLVFSFTLSGSVRVWFRQLKRGSSGS------------------------------

Query:  RTIESLKDYVARFNEEKLQVEGLTDTMSLLVFMSGVKDEHFAFSFGKKTSSTFSEALSQ
        RT ESL DYVARFNEEKLQ+EGLTD +SLL FMSGV+DEH +FSF K+T STFSEALS+
Subjt:  RTIESLKDYVARFNEEKLQVEGLTDTMSLLVFMSGVKDEHFAFSFGKKTSSTFSEALSQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAGAAGGTTCCCCCAAAGTTTAAGCTCCCAGTCATAAAGCAATATGACGGCTCGGTCGACCCAGTGGATCATCTTGATACCTATTGCGAATGGATGGACATCTA
TGGGGTAATAGAGGCGATCAGGTGTCTAGTGTTCTCCTTCACCCTGAGTGGTTCAGTTAGAGTCTGGTTTCGACAATTAAAGAGGGGCTCGAGTGGTTCAAGGACAATAG
AAAGCCTCAAAGATTATGTGGCTCGATTTAACGAAGAGAAGCTACAGGTTGAAGGTCTAACCGACACGATGTCCCTACTGGTTTTCATGTCCGGCGTGAAAGATGAGCAC
TTCGCATTCTCGTTTGGAAAGAAAACTTCGAGCACCTTCTCAGAAGCACTGAGTCAAACCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGAGAAGGTTCCCCCAAAGTTTAAGCTCCCAGTCATAAAGCAATATGACGGCTCGGTCGACCCAGTGGATCATCTTGATACCTATTGCGAATGGATGGACATCTA
TGGGGTAATAGAGGCGATCAGGTGTCTAGTGTTCTCCTTCACCCTGAGTGGTTCAGTTAGAGTCTGGTTTCGACAATTAAAGAGGGGCTCGAGTGGTTCAAGGACAATAG
AAAGCCTCAAAGATTATGTGGCTCGATTTAACGAAGAGAAGCTACAGGTTGAAGGTCTAACCGACACGATGTCCCTACTGGTTTTCATGTCCGGCGTGAAAGATGAGCAC
TTCGCATTCTCGTTTGGAAAGAAAACTTCGAGCACCTTCTCAGAAGCACTGAGTCAAACCTAG
Protein sequenceShow/hide protein sequence
MGEKVPPKFKLPVIKQYDGSVDPVDHLDTYCEWMDIYGVIEAIRCLVFSFTLSGSVRVWFRQLKRGSSGSRTIESLKDYVARFNEEKLQVEGLTDTMSLLVFMSGVKDEH
FAFSFGKKTSSTFSEALSQT