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Moc01g04500 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g04500
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein SPIRRIG
Genome locationchr1:2966837..2968146
RNA-Seq ExpressionMoc01g04500
SyntenyMoc01g04500
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145129.1 uncharacterized protein LOC111014646 [Momordica charantia]4.2e-1239.04Show/hide
Query:  SRPGLDPDPCSAWAKPIFLPLPLVEVFGLVIIELGAYLAERRR--RKFQHQQLAPPPPLVKDPRKGKTPELNEVEESTTNAQSKLKIGGNDKRRTRIFDP
        S+P L+       A  +  P PL + F ++  ++   L    +  R+++ Q+ +   PLV+DPRKGK P  +E EEST +A SKL+IGGN +RRT+IFD 
Subjt:  SRPGLDPDPCSAWAKPIFLPLPLVEVFGLVIIELGAYLAERRR--RKFQHQQLAPPPPLVKDPRKGKTPELNEVEESTTNAQSKLKIGGNDKRRTRIFDP

Query:  PGQQQVTRQPKSSIPKGGNERQDERGDIGLINIDKERSRDQPELSE
           Q++ +Q K S P GG    D+R     +++DK +  DQPE SE
Subjt:  PGQQQVTRQPKSSIPKGGNERQDERGDIGLINIDKERSRDQPELSE

XP_022155816.1 protein SPIRRIG [Momordica charantia]2.6e-0947.19Show/hide
Query:  PLVKDPRKGKTPELNEVEESTTNAQSKLKIGGNDKRRTRIFDPPGQQQVTRQPKSSIPKGGNERQDERGDIGLINIDKERSRDQPELSE
        PL + PRKGK P  +E EEST +  S+L++  N KRRT+ FD  GQQ+  +Q KS +P GG    D++ +   I++DK++S D+PELSE
Subjt:  PLVKDPRKGKTPELNEVEESTTNAQSKLKIGGNDKRRTRIFDPPGQQQVTRQPKSSIPKGGNERQDERGDIGLINIDKERSRDQPELSE

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]6.7e-1048.31Show/hide
Query:  PLVKDPRKGKTPELNEVEESTTNAQSKLKIGGNDKRRTRIFDPPGQQQVTRQPKSSIPKGGNERQDERGDIGLINIDKERSRDQPELSE
        PLV+DP+KGK P  ++ EEST +  SKL+IGGN ++RTRIFDP   ++  +Q KS  P GG    D+R     I++DK +  D+PE SE
Subjt:  PLVKDPRKGKTPELNEVEESTTNAQSKLKIGGNDKRRTRIFDPPGQQQVTRQPKSSIPKGGNERQDERGDIGLINIDKERSRDQPELSE

TrEMBL top hitse value%identityAlignment
A0A6J1CUA7 uncharacterized protein LOC1110146462.0e-1239.04Show/hide
Query:  SRPGLDPDPCSAWAKPIFLPLPLVEVFGLVIIELGAYLAERRR--RKFQHQQLAPPPPLVKDPRKGKTPELNEVEESTTNAQSKLKIGGNDKRRTRIFDP
        S+P L+       A  +  P PL + F ++  ++   L    +  R+++ Q+ +   PLV+DPRKGK P  +E EEST +A SKL+IGGN +RRT+IFD 
Subjt:  SRPGLDPDPCSAWAKPIFLPLPLVEVFGLVIIELGAYLAERRR--RKFQHQQLAPPPPLVKDPRKGKTPELNEVEESTTNAQSKLKIGGNDKRRTRIFDP

Query:  PGQQQVTRQPKSSIPKGGNERQDERGDIGLINIDKERSRDQPELSE
           Q++ +Q K S P GG    D+R     +++DK +  DQPE SE
Subjt:  PGQQQVTRQPKSSIPKGGNERQDERGDIGLINIDKERSRDQPELSE

A0A6J1DSV3 protein SPIRRIG1.2e-0947.19Show/hide
Query:  PLVKDPRKGKTPELNEVEESTTNAQSKLKIGGNDKRRTRIFDPPGQQQVTRQPKSSIPKGGNERQDERGDIGLINIDKERSRDQPELSE
        PL + PRKGK P  +E EEST +  S+L++  N KRRT+ FD  GQQ+  +Q KS +P GG    D++ +   I++DK++S D+PELSE
Subjt:  PLVKDPRKGKTPELNEVEESTTNAQSKLKIGGNDKRRTRIFDPPGQQQVTRQPKSSIPKGGNERQDERGDIGLINIDKERSRDQPELSE

A0A6J1DWY0 uncharacterized protein LOC1110252933.3e-1048.31Show/hide
Query:  PLVKDPRKGKTPELNEVEESTTNAQSKLKIGGNDKRRTRIFDPPGQQQVTRQPKSSIPKGGNERQDERGDIGLINIDKERSRDQPELSE
        PLV+DP+KGK P  ++ EEST +  SKL+IGGN ++RTRIFDP   ++  +Q KS  P GG    D+R     I++DK +  D+PE SE
Subjt:  PLVKDPRKGKTPELNEVEESTTNAQSKLKIGGNDKRRTRIFDPPGQQQVTRQPKSSIPKGGNERQDERGDIGLINIDKERSRDQPELSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAGCTCCAAGTTAAGGCACAATCGGCAAAAGAAATGGGGCCTCTACAGACCAGAGAGCCCCAATCGAGCAACGATGAAGGGAAGACTGAGCCGACCAGGGCTCGA
TCCCGACCCCTGCTCGGCCTGGGCCAAGCCCATCTTCCTTCCTCTCCCGTTGGTTGAGGTATTTGGTCTCGTGATCATCGAGCTTGGTGCATATTTGGCGGAACGAAGGA
GGCGAAAATTCCAGCATCAACAATTGGCACCCCCACCACCCCTCGTCAAGGATCCTCGTAAGGGTAAAACCCCAGAGTTGAACGAGGTAGAAGAGTCGACTACTAACGCT
CAGAGCAAGTTGAAGATTGGAGGGAATGACAAACGACGAACCCGAATCTTCGACCCACCGGGTCAACAGCAAGTCACGAGGCAACCGAAGTCCTCGATACCCAAGGGAGG
CAATGAACGCCAAGATGAGCGAGGAGACATTGGACTTATCAACATCGACAAGGAAAGGTCGCGGGATCAACCCGAACTATCGGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTAGCTCCAAGTTAAGGCACAATCGGCAAAAGAAATGGGGCCTCTACAGACCAGAGAGCCCCAATCGAGCAACGATGAAGGGAAGACTGAGCCGACCAGGGCTCGA
TCCCGACCCCTGCTCGGCCTGGGCCAAGCCCATCTTCCTTCCTCTCCCGTTGGTTGAGGTATTTGGTCTCGTGATCATCGAGCTTGGTGCATATTTGGCGGAACGAAGGA
GGCGAAAATTCCAGCATCAACAATTGGCACCCCCACCACCCCTCGTCAAGGATCCTCGTAAGGGTAAAACCCCAGAGTTGAACGAGGTAGAAGAGTCGACTACTAACGCT
CAGAGCAAGTTGAAGATTGGAGGGAATGACAAACGACGAACCCGAATCTTCGACCCACCGGGTCAACAGCAAGTCACGAGGCAACCGAAGTCCTCGATACCCAAGGGAGG
CAATGAACGCCAAGATGAGCGAGGAGACATTGGACTTATCAACATCGACAAGGAAAGGTCGCGGGATCAACCCGAACTATCGGAGTAG
Protein sequenceShow/hide protein sequence
MASSKLRHNRQKKWGLYRPESPNRATMKGRLSRPGLDPDPCSAWAKPIFLPLPLVEVFGLVIIELGAYLAERRRRKFQHQQLAPPPPLVKDPRKGKTPELNEVEESTTNA
QSKLKIGGNDKRRTRIFDPPGQQQVTRQPKSSIPKGGNERQDERGDIGLINIDKERSRDQPELSE