; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc01g04670 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g04670
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr1:3066332..3066763
RNA-Seq ExpressionMoc01g04670
SyntenyMoc01g04670
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW15251.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]2.5e-1059.09Show/hide
Query:  MVFLIGLNESYARVKAQILLMEPIPPINKVFSLIIQEEHQRSISTPDSIALVAAIETSKRPVNDRF
        M FL+GLNES+A ++AQILLMEP PP+NKVFSL++QEE QRS++T +S A  A       PV+ RF
Subjt:  MVFLIGLNESYARVKAQILLMEPIPPINKVFSLIIQEEHQRSISTPDSIALVAAIETSKRPVNDRF

RVW86476.1 Retrovirus-related Pol polyprotein from transposon RE2 [Vitis vinifera]2.5e-1059.09Show/hide
Query:  MVFLIGLNESYARVKAQILLMEPIPPINKVFSLIIQEEHQRSISTPDSIALVAAIETSKRPVNDRF
        M FL+GLNES+A ++AQILLMEP PP+NKVFSL++QEE QRS++T +S A  A       PV+ RF
Subjt:  MVFLIGLNESYARVKAQILLMEPIPPINKVFSLIIQEEHQRSISTPDSIALVAAIETSKRPVNDRF

RVX00083.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]2.5e-1059.09Show/hide
Query:  MVFLIGLNESYARVKAQILLMEPIPPINKVFSLIIQEEHQRSISTPDSIALVAAIETSKRPVNDRF
        M FL+GLNES+A ++AQILLMEP PP+NKVFSL++QEE QRS++T +S A  A       PV+ RF
Subjt:  MVFLIGLNESYARVKAQILLMEPIPPINKVFSLIIQEEHQRSISTPDSIALVAAIETSKRPVNDRF

XP_022145891.1 uncharacterized protein LOC111015239 [Momordica charantia]1.4e-1056.94Show/hide
Query:  MVFLIGLNESYARVKAQILLMEPIPPINKVFSLIIQEEHQRSIST---PDSIALVAAIETSKRPVNDRFAKE
        M FL+GLNESYA+++AQILLM+PIPP+NKVFSL+IQEE QR+I T   P     +A  E SKR    +F ++
Subjt:  MVFLIGLNESYARVKAQILLMEPIPPINKVFSLIIQEEHQRSIST---PDSIALVAAIETSKRPVNDRFAKE

XP_022155284.1 uncharacterized protein LOC111022420 [Momordica charantia]5.7e-1569.86Show/hide
Query:  MVFLIGLNESYARVKAQILLMEPIPPINKVFSLIIQEEHQRS----ISTPDSIALVAAIETSKRPVNDRFAKE
        M+FL+GLNESYA V+AQIL M+P+PPINKVFSL+IQEE+ RS    I +PDSIAL AA E SKRP NDRF K+
Subjt:  MVFLIGLNESYARVKAQILLMEPIPPINKVFSLIIQEEHQRS----ISTPDSIALVAAIETSKRPVNDRFAKE

TrEMBL top hitse value%identityAlignment
A0A438BW82 Retrovirus-related Pol polyprotein from transposon TNT 1-941.2e-1059.09Show/hide
Query:  MVFLIGLNESYARVKAQILLMEPIPPINKVFSLIIQEEHQRSISTPDSIALVAAIETSKRPVNDRF
        M FL+GLNES+A ++AQILLMEP PP+NKVFSL++QEE QRS++T +S A  A       PV+ RF
Subjt:  MVFLIGLNESYARVKAQILLMEPIPPINKVFSLIIQEEHQRSISTPDSIALVAAIETSKRPVNDRF

A0A438HPU5 Retrovirus-related Pol polyprotein from transposon RE21.2e-1059.09Show/hide
Query:  MVFLIGLNESYARVKAQILLMEPIPPINKVFSLIIQEEHQRSISTPDSIALVAAIETSKRPVNDRF
        M FL+GLNES+A ++AQILLMEP PP+NKVFSL++QEE QRS++T +S A  A       PV+ RF
Subjt:  MVFLIGLNESYARVKAQILLMEPIPPINKVFSLIIQEEHQRSISTPDSIALVAAIETSKRPVNDRF

A0A438I180 Retrovirus-related Pol polyprotein from transposon RE11.2e-1059.09Show/hide
Query:  MVFLIGLNESYARVKAQILLMEPIPPINKVFSLIIQEEHQRSISTPDSIALVAAIETSKRPVNDRF
        M FL+GLNES+A ++AQILLMEP PP+NKVFSL++QEE QRS++T +S A  A       PV+ RF
Subjt:  MVFLIGLNESYARVKAQILLMEPIPPINKVFSLIIQEEHQRSISTPDSIALVAAIETSKRPVNDRF

A0A6J1CXR2 uncharacterized protein LOC1110152397.0e-1156.94Show/hide
Query:  MVFLIGLNESYARVKAQILLMEPIPPINKVFSLIIQEEHQRSIST---PDSIALVAAIETSKRPVNDRFAKE
        M FL+GLNESYA+++AQILLM+PIPP+NKVFSL+IQEE QR+I T   P     +A  E SKR    +F ++
Subjt:  MVFLIGLNESYARVKAQILLMEPIPPINKVFSLIIQEEHQRSIST---PDSIALVAAIETSKRPVNDRFAKE

A0A6J1DPT8 uncharacterized protein LOC1110224202.7e-1569.86Show/hide
Query:  MVFLIGLNESYARVKAQILLMEPIPPINKVFSLIIQEEHQRS----ISTPDSIALVAAIETSKRPVNDRFAKE
        M+FL+GLNESYA V+AQIL M+P+PPINKVFSL+IQEE+ RS    I +PDSIAL AA E SKRP NDRF K+
Subjt:  MVFLIGLNESYARVKAQILLMEPIPPINKVFSLIIQEEHQRS----ISTPDSIALVAAIETSKRPVNDRFAKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTTCCTGATAGGGCTAAATGAGTCTTATGCTAGAGTCAAAGCACAAATTCTTTTAATGGAACCTATTCCACCAATTAATAAGGTTTTTTCTCTTATAATTCAAGA
AGAACACCAACGATCGATTTCCACTCCAGATTCAATCGCTTTGGTTGCTGCTATCGAGACTTCTAAACGGCCTGTGAATGATCGTTTTGCAAAAGAGTATATCAACGTCC
TCATTGTACTCAATGTGGTCTTAAAGGACATACAATCGAGCATTGCTACAAGCTTCATGGGTATCCACCAGGCTATAAACGACGGAATTCATTCAACACATCAGGATATC
CTTCAAACTCAAGTATTGTTTCTCCTGCTAAAAAATTGGCCTCCTCTTCAGCCACAACAACCACTGTTTCTTCAAATCAACCAGCTTTCTTTGCTAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGTTCCTGATAGGGCTAAATGAGTCTTATGCTAGAGTCAAAGCACAAATTCTTTTAATGGAACCTATTCCACCAATTAATAAGGTTTTTTCTCTTATAATTCAAGA
AGAACACCAACGATCGATTTCCACTCCAGATTCAATCGCTTTGGTTGCTGCTATCGAGACTTCTAAACGGCCTGTGAATGATCGTTTTGCAAAAGAGTATATCAACGTCC
TCATTGTACTCAATGTGGTCTTAAAGGACATACAATCGAGCATTGCTACAAGCTTCATGGGTATCCACCAGGCTATAAACGACGGAATTCATTCAACACATCAGGATATC
CTTCAAACTCAAGTATTGTTTCTCCTGCTAAAAAATTGGCCTCCTCTTCAGCCACAACAACCACTGTTTCTTCAAATCAACCAGCTTTCTTTGCTAGTTTGA
Protein sequenceShow/hide protein sequence
MVFLIGLNESYARVKAQILLMEPIPPINKVFSLIIQEEHQRSISTPDSIALVAAIETSKRPVNDRFAKEYINVLIVLNVVLKDIQSSIATSFMGIHQAINDGIHSTHQDI
LQTQVLFLLLKNWPPLQPQQPLFLQINQLSLLV