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Moc01g04710 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g04710
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionZf-CCHC domain-containing protein/UBN2 domain-containing protein
Genome locationchr1:3073374..3079941
RNA-Seq ExpressionMoc01g04710
SyntenyMoc01g04710
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046182.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa]3.8e-1741.78Show/hide
Query:  EEDDNNEVSIEKPSYDELMDAYEGIIVEFEKVCSKYIALKKKYSSMSNEIKSLKDEIDALNIENNSLVEENACLKNNVNDVVKH-----DVIEISCDEKL
        E++ ++EV++E PS +EL + +E +  + EK+ SKY+ LKKKY+ +S+E KSL D+I              AC K NVN  ++      D     C+EK 
Subjt:  EEDDNNEVSIEKPSYDELMDAYEGIIVEFEKVCSKYIALKKKYSSMSNEIKSLKDEIDALNIENNSLVEENACLKNNVNDVVKH-----DVIEISCDEKL

Query:  ALLDKIKLLEYDIFDKDEPVKALREKESNLVNELECAKENIKKLTI
        ALLDK++ LE+D  +KD  +K L+E E N++ +L+ AKE IKKLTI
Subjt:  ALLDKIKLLEYDIFDKDEPVKALREKESNLVNELECAKENIKKLTI

TYK24240.1 UBN2 domain-containing protein [Cucumis melo var. makuwa]1.4e-0837.41Show/hide
Query:  DDNNEV--SIEKPSYDELMDAYEGIIVEFEKVCSKYIALKKKYSSMSNEIKSLKDEIDALNIENNSLVEENACLKNNVNDV------VKHDVIEISCDEK
        DD++E    +EK +Y  LM          +K+ S+Y+ LKKKY              + L  EN SL+ ++AC K N N V      V  D     C+EK
Subjt:  DDNNEV--SIEKPSYDELMDAYEGIIVEFEKVCSKYIALKKKYSSMSNEIKSLKDEIDALNIENNSLVEENACLKNNVNDV------VKHDVIEISCDEK

Query:  LALLDKIKLLEYDIFDKDEPVKALREKESNLVNELECAKENIKKLTI
         ALLDK++ L++D  +KD  +K L+E E N++ +L  AKE I+KLTI
Subjt:  LALLDKIKLLEYDIFDKDEPVKALREKESNLVNELECAKENIKKLTI

XP_022147190.1 uncharacterized protein LOC111016201 [Momordica charantia]6.2e-1272.13Show/hide
Query:  RRVRVIMEDQKVEQKKTRKYIEELSENFDVILLVLEKAKMLADPATSSNLVHAPQETLSYP
        RR R++MEDQK EQ+KTRK IEEL E  DVILL LEK K  ADPATSSN VH PQET  YP
Subjt:  RRVRVIMEDQKVEQKKTRKYIEELSENFDVILLVLEKAKMLADPATSSNLVHAPQETLSYP

XP_022157796.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]7.4e-1368.18Show/hide
Query:  MEDQKVEQKKTRKYIEELSENFDVILLVLEKAKMLADPATSSNLVHAPQETLSYPPRFGQPLTPVA
        MEDQK EQ+KTRK IEEL E  D I L LEK K  ADPATSSN +H PQET  YPP +G PL PVA
Subjt:  MEDQKVEQKKTRKYIEELSENFDVILLVLEKAKMLADPATSSNLVHAPQETLSYPPRFGQPLTPVA

XP_031741720.1 uncharacterized protein LOC116403915 [Cucumis sativus]1.9e-1339.47Show/hide
Query:  MAFGNEEDDNNE-VSIEKPSYDELMDAYEGIIVEFEKVCSKYIALKKKYSSMSNEIKSLKDEIDALNIENNSLVEENACLKNNVNDVVKHDVIEIS----
        MA  +++D++++ V++E  S DEL + +E +  + EK+ SKY+ LKKKY+ + +E KSL D I              AC K N N   + + + +S    
Subjt:  MAFGNEEDDNNE-VSIEKPSYDELMDAYEGIIVEFEKVCSKYIALKKKYSSMSNEIKSLKDEIDALNIENNSLVEENACLKNNVNDVVKHDVIEIS----

Query:  -CDEKLALLDKIKLLEYDIFDKDEPVKALREKESNLVNELECAKENIKKLTI
         C EK ALLDK++ LE+D  +KD  +K L+E E +++ EL+ AKE IKKLTI
Subjt:  -CDEKLALLDKIKLLEYDIFDKDEPVKALREKESNLVNELECAKENIKKLTI

TrEMBL top hitse value%identityAlignment
A0A5A7TRZ7 Zf-CCHC domain-containing protein/UBN2 domain-containing protein1.8e-1741.78Show/hide
Query:  EEDDNNEVSIEKPSYDELMDAYEGIIVEFEKVCSKYIALKKKYSSMSNEIKSLKDEIDALNIENNSLVEENACLKNNVNDVVKH-----DVIEISCDEKL
        E++ ++EV++E PS +EL + +E +  + EK+ SKY+ LKKKY+ +S+E KSL D+I              AC K NVN  ++      D     C+EK 
Subjt:  EEDDNNEVSIEKPSYDELMDAYEGIIVEFEKVCSKYIALKKKYSSMSNEIKSLKDEIDALNIENNSLVEENACLKNNVNDVVKH-----DVIEISCDEKL

Query:  ALLDKIKLLEYDIFDKDEPVKALREKESNLVNELECAKENIKKLTI
        ALLDK++ LE+D  +KD  +K L+E E N++ +L+ AKE IKKLTI
Subjt:  ALLDKIKLLEYDIFDKDEPVKALREKESNLVNELECAKENIKKLTI

A0A5D3DLU8 UBN2 domain-containing protein7.0e-0937.41Show/hide
Query:  DDNNEV--SIEKPSYDELMDAYEGIIVEFEKVCSKYIALKKKYSSMSNEIKSLKDEIDALNIENNSLVEENACLKNNVNDV------VKHDVIEISCDEK
        DD++E    +EK +Y  LM          +K+ S+Y+ LKKKY              + L  EN SL+ ++AC K N N V      V  D     C+EK
Subjt:  DDNNEV--SIEKPSYDELMDAYEGIIVEFEKVCSKYIALKKKYSSMSNEIKSLKDEIDALNIENNSLVEENACLKNNVNDV------VKHDVIEISCDEK

Query:  LALLDKIKLLEYDIFDKDEPVKALREKESNLVNELECAKENIKKLTI
         ALLDK++ L++D  +KD  +K L+E E N++ +L  AKE I+KLTI
Subjt:  LALLDKIKLLEYDIFDKDEPVKALREKESNLVNELECAKENIKKLTI

A0A6J1CZG4 uncharacterized protein LOC1110162013.0e-1272.13Show/hide
Query:  RRVRVIMEDQKVEQKKTRKYIEELSENFDVILLVLEKAKMLADPATSSNLVHAPQETLSYP
        RR R++MEDQK EQ+KTRK IEEL E  DVILL LEK K  ADPATSSN VH PQET  YP
Subjt:  RRVRVIMEDQKVEQKKTRKYIEELSENFDVILLVLEKAKMLADPATSSNLVHAPQETLSYP

A0A6J1D7T3 uncharacterized protein LOC1110178122.6e-0860.61Show/hide
Query:  MEDQKVEQKKTRKYIEELSENFDVILLVLEKAKMLADPATSSNLVHAPQETLSYPPRFGQPLTPVA
        M+DQK EQ+K RK IEEL E  DVILL LEK K +ADP TSSN VH  QE   YP  +  PL  VA
Subjt:  MEDQKVEQKKTRKYIEELSENFDVILLVLEKAKMLADPATSSNLVHAPQETLSYPPRFGQPLTPVA

A0A6J1DZ90 Ribonuclease H3.6e-1368.18Show/hide
Query:  MEDQKVEQKKTRKYIEELSENFDVILLVLEKAKMLADPATSSNLVHAPQETLSYPPRFGQPLTPVA
        MEDQK EQ+KTRK IEEL E  D I L LEK K  ADPATSSN +H PQET  YPP +G PL PVA
Subjt:  MEDQKVEQKKTRKYIEELSENFDVILLVLEKAKMLADPATSSNLVHAPQETLSYPPRFGQPLTPVA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATTCGGAAATGAAGAAGATGACAACAATGAGGTAAGTATTGAAAAACCCTCTTATGATGAGCTTATGGATGCATATGAGGGAATTATAGTTGAATTTGAAAAAGT
ATGCTCAAAATACATAGCTCTCAAAAAGAAATATTCTAGCATGTCTAATGAGATTAAATCTTTAAAAGATGAAATAGATGCTTTGAATATTGAAAATAATTCTTTGGTTG
AAGAAAATGCATGCTTGAAAAACAATGTCAACGATGTTGTGAAGCATGATGTAATTGAAATTTCATGTGATGAGAAGCTTGCTTTATTAGATAAAATTAAACTTCTCGAG
TATGATATTTTTGATAAAGATGAACCTGTTAAAGCTCTTAGAGAAAAAGAGTCAAATCTTGTAAATGAGCTTGAATGTGCTAAAGAAAACATTAAGAAGTTGACAATAGC
CGTCACCCACCCCTCTCCTTCTTCTTGTTCATCGGCGACCACAGCTCACGGCGGCGACGGAAGTGGCGGCGCCTCCCAGCAGCAGCGGCGGCCGGCGACCACACCCGTAG
CAGCAGCAGCAGCGGCGGCGCGACTTCCCCGACGTCCCGGCGATCTGCAGCAGCGGCGACGCGTTCCCCGGCGGTCTGCAACGAACCAGCAGCGCTCCTCCTCGCGGCGG
CACACGACAACGGGCCAGATCCGCGGCGGGGCACGGCGAACAGGTTGTTACAGCGGCGAACCGGCGGCGCACGACAAACGGTTCAGATCCGCGGCGAACCTCGACGACCT
GCTGCTACGATCCGACGAACAGCGACTCCAGCGGCGAGATTTGTGCGTTACAGCAACGTTTAGGACGTTTGGCGGTGACCCACATCCGTTAGAAGCTCGATTTAGGCTAC
CCACACCTTGGCGAGCTAGATCTAGGTGTGAGGTCGACGCAAAACTTAAGGGCGCGGTTGTGATATCGAGGACTCGGGTAAAAACGGTCGAGGGTCGATACGAGGAGTCC
TTTGGAAGGAAGGCTATTGGGGCCTTGGGTGAAAATGGTCAAGGGCCAATAGATGGTGAAGTCATCGGGGCCTCGGGTAAAAATGGTCGAGGGCCGATGCAGCAGTGTCG
GGGCTCTGGACGCAGGGTGAGAGTAATAATGGAAGATCAAAAAGTTGAGCAAAAGAAAACAAGGAAATATATTGAGGAATTGAGTGAAAATTTTGATGTCATCCTCCTCG
TGCTAGAAAAAGCAAAGATGCTTGCAGATCCCGCTACATCTAGCAATCTCGTCCATGCCCCGCAAGAAACCCTGTCTTATCCACCTAGGTTTGGCCAACCTCTTACGCCA
GTAGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCATTCGGAAATGAAGAAGATGACAACAATGAGGTAAGTATTGAAAAACCCTCTTATGATGAGCTTATGGATGCATATGAGGGAATTATAGTTGAATTTGAAAAAGT
ATGCTCAAAATACATAGCTCTCAAAAAGAAATATTCTAGCATGTCTAATGAGATTAAATCTTTAAAAGATGAAATAGATGCTTTGAATATTGAAAATAATTCTTTGGTTG
AAGAAAATGCATGCTTGAAAAACAATGTCAACGATGTTGTGAAGCATGATGTAATTGAAATTTCATGTGATGAGAAGCTTGCTTTATTAGATAAAATTAAACTTCTCGAG
TATGATATTTTTGATAAAGATGAACCTGTTAAAGCTCTTAGAGAAAAAGAGTCAAATCTTGTAAATGAGCTTGAATGTGCTAAAGAAAACATTAAGAAGTTGACAATAGC
CGTCACCCACCCCTCTCCTTCTTCTTGTTCATCGGCGACCACAGCTCACGGCGGCGACGGAAGTGGCGGCGCCTCCCAGCAGCAGCGGCGGCCGGCGACCACACCCGTAG
CAGCAGCAGCAGCGGCGGCGCGACTTCCCCGACGTCCCGGCGATCTGCAGCAGCGGCGACGCGTTCCCCGGCGGTCTGCAACGAACCAGCAGCGCTCCTCCTCGCGGCGG
CACACGACAACGGGCCAGATCCGCGGCGGGGCACGGCGAACAGGTTGTTACAGCGGCGAACCGGCGGCGCACGACAAACGGTTCAGATCCGCGGCGAACCTCGACGACCT
GCTGCTACGATCCGACGAACAGCGACTCCAGCGGCGAGATTTGTGCGTTACAGCAACGTTTAGGACGTTTGGCGGTGACCCACATCCGTTAGAAGCTCGATTTAGGCTAC
CCACACCTTGGCGAGCTAGATCTAGGTGTGAGGTCGACGCAAAACTTAAGGGCGCGGTTGTGATATCGAGGACTCGGGTAAAAACGGTCGAGGGTCGATACGAGGAGTCC
TTTGGAAGGAAGGCTATTGGGGCCTTGGGTGAAAATGGTCAAGGGCCAATAGATGGTGAAGTCATCGGGGCCTCGGGTAAAAATGGTCGAGGGCCGATGCAGCAGTGTCG
GGGCTCTGGACGCAGGGTGAGAGTAATAATGGAAGATCAAAAAGTTGAGCAAAAGAAAACAAGGAAATATATTGAGGAATTGAGTGAAAATTTTGATGTCATCCTCCTCG
TGCTAGAAAAAGCAAAGATGCTTGCAGATCCCGCTACATCTAGCAATCTCGTCCATGCCCCGCAAGAAACCCTGTCTTATCCACCTAGGTTTGGCCAACCTCTTACGCCA
GTAGCATAG
Protein sequenceShow/hide protein sequence
MAFGNEEDDNNEVSIEKPSYDELMDAYEGIIVEFEKVCSKYIALKKKYSSMSNEIKSLKDEIDALNIENNSLVEENACLKNNVNDVVKHDVIEISCDEKLALLDKIKLLE
YDIFDKDEPVKALREKESNLVNELECAKENIKKLTIAVTHPSPSSCSSATTAHGGDGSGGASQQQRRPATTPVAAAAAAARLPRRPGDLQQRRRVPRRSATNQQRSSSRR
HTTTGQIRGGARRTGCYSGEPAAHDKRFRSAANLDDLLLRSDEQRLQRRDLCVTATFRTFGGDPHPLEARFRLPTPWRARSRCEVDAKLKGAVVISRTRVKTVEGRYEES
FGRKAIGALGENGQGPIDGEVIGASGKNGRGPMQQCRGSGRRVRVIMEDQKVEQKKTRKYIEELSENFDVILLVLEKAKMLADPATSSNLVHAPQETLSYPPRFGQPLTP
VA