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Moc01g10170 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g10170
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Genome locationchr1:6326587..6331499
RNA-Seq ExpressionMoc01g10170
SyntenyMoc01g10170
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141932.1 uncharacterized protein LOC111012188 [Momordica charantia]4.7e-1351.91Show/hide
Query:  DEDLGELPQEVHGDEFEEEEENDDISQYEVRVRTSVHESQQDDEEPLAQEQEGTSGPIDVHSEAMEESSSSYSQSKTSSLSSLNVSDPNFVATAEISDEE
        DEDLG+LPQEV  +E EEEEEN+DISQY             D+EE   Q QEG S P DV +EA +ESSSS S+  T S SSLNV DPNFVA AE S+EE
Subjt:  DEDLGELPQEVHGDEFEEEEENDDISQYEVRVRTSVHESQQDDEEPLAQEQEGTSGPIDVHSEAMEESSSSYSQSKTSSLSSLNVSDPNFVATAEISDEE

Query:  VNLIKVVKKTQKKKKVAEIVPTQFLGLGPEP
          L     K +K+K   ++   QF    PEP
Subjt:  VNLIKVVKKTQKKKKVAEIVPTQFLGLGPEP

XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]5.9e-2477.53Show/hide
Query:  VTQGQLNVDGEDEDLGELPQEVHGDEFEEEEENDDISQYEVRVRTSVHESQQDDEEPLAQEQEGTSGPIDVHSEAMEESSSSYSQSKTS
        + + QLNVD EDED GELPQEVHGDEFE+EE+NDDISQYEV+VRT VHESQQ DEEP  +EQEGTSGP+DV SEAMEESSSS SQ   S
Subjt:  VTQGQLNVDGEDEDLGELPQEVHGDEFEEEEENDDISQYEVRVRTSVHESQQDDEEPLAQEQEGTSGPIDVHSEAMEESSSSYSQSKTS

XP_022156786.1 uncharacterized protein LOC111023620 [Momordica charantia]7.7e-1667.44Show/hide
Query:  VHESQQDDEEPLAQEQEGTSGPIDVHSEAMEESSSSYSQSKTSSLSSLNVSDPNFVATAEISDEEVNLIKVVKKTQKKKKVAEIVP
        +HESQQDDEE   QEQEG SG +DV +EA+EESSSS S+ K+ SLSSLNVSDPNFVA A  S+E+V L KVVKK + KK + EIVP
Subjt:  VHESQQDDEEPLAQEQEGTSGPIDVHSEAMEESSSSYSQSKTSSLSSLNVSDPNFVATAEISDEEVNLIKVVKKTQKKKKVAEIVP

XP_022156935.1 uncharacterized protein LOC111023761 [Momordica charantia]3.3e-6773.36Show/hide
Query:  HYQFEHDLVSGDSEHDMEPLEHSDSATVKIECQIAPSTIMVETPPATLQEVLVALNEARGEDPLKDDGNSGVTQGQLNVDGEDEDLGELPQEVHGDEFEE
        H  F++  VSGDSEHDMEPLEHSDSATVKIECQIAPSTIMVETPPATLQEVLVALNEARGEDPLKDDGNSG                             
Subjt:  HYQFEHDLVSGDSEHDMEPLEHSDSATVKIECQIAPSTIMVETPPATLQEVLVALNEARGEDPLKDDGNSGVTQGQLNVDGEDEDLGELPQEVHGDEFEE

Query:  EEENDDISQYEVRVRTSVHESQQDDEEPLAQEQEGTSGPIDVHSEAMEESSSSYSQSKTSSLSSLNVSDPNFVATAEISDEEVNLIKVVKKTQKKKKVAE
                              QDDEEPLAQEQEGTSGPIDVHSEAMEESSSSYSQSKTSSLSSLNVSDPNFVATAEISDEEVNLIKVVKKTQKKKKVAE
Subjt:  EEENDDISQYEVRVRTSVHESQQDDEEPLAQEQEGTSGPIDVHSEAMEESSSSYSQSKTSSLSSLNVSDPNFVATAEISDEEVNLIKVVKKTQKKKKVAE

Query:  IVPTQFLGLGPEPL
        IVPTQFLGLGPEPL
Subjt:  IVPTQFLGLGPEPL

XP_022158483.1 uncharacterized protein LOC111024964 [Momordica charantia]9.7e-2752.44Show/hide
Query:  ETPPATLQEVLVALNEARGEDPLKDDGNSGVTQGQLNVDGEDEDLGELPQEVHGDEFEEEEENDDISQYEVRVRTSVHESQQDDEEPLAQEQEGTSGPID
        E   + + ++LVALNEA GEDPL+DDGNS   QG+LNVDGEDEDLG+LPQEVHGDE EEEEENDDISQYEVR+   VHESQ+D  E   +  EG S P+D
Subjt:  ETPPATLQEVLVALNEARGEDPLKDDGNSGVTQGQLNVDGEDEDLGELPQEVHGDEFEEEEENDDISQYEVRVRTSVHESQQDDEEPLAQEQEGTSGPID

Query:  VHSEAMEESSSSYSQSKTSSLSSLNVSDPNFVATAEISDEEVNLIKVVKKTQKKKKVAEIVPTQ
        V +EA  +SSS  S SK +S   +N  +P        ++++ +  K V +   K+  A I P Q
Subjt:  VHSEAMEESSSSYSQSKTSSLSSLNVSDPNFVATAEISDEEVNLIKVVKKTQKKKKVAEIVPTQ

TrEMBL top hitse value%identityAlignment
A0A6J1CL76 uncharacterized protein LOC1110121882.3e-1351.91Show/hide
Query:  DEDLGELPQEVHGDEFEEEEENDDISQYEVRVRTSVHESQQDDEEPLAQEQEGTSGPIDVHSEAMEESSSSYSQSKTSSLSSLNVSDPNFVATAEISDEE
        DEDLG+LPQEV  +E EEEEEN+DISQY             D+EE   Q QEG S P DV +EA +ESSSS S+  T S SSLNV DPNFVA AE S+EE
Subjt:  DEDLGELPQEVHGDEFEEEEENDDISQYEVRVRTSVHESQQDDEEPLAQEQEGTSGPIDVHSEAMEESSSSYSQSKTSSLSSLNVSDPNFVATAEISDEE

Query:  VNLIKVVKKTQKKKKVAEIVPTQFLGLGPEP
          L     K +K+K   ++   QF    PEP
Subjt:  VNLIKVVKKTQKKKKVAEIVPTQFLGLGPEP

A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220072.9e-2477.53Show/hide
Query:  VTQGQLNVDGEDEDLGELPQEVHGDEFEEEEENDDISQYEVRVRTSVHESQQDDEEPLAQEQEGTSGPIDVHSEAMEESSSSYSQSKTS
        + + QLNVD EDED GELPQEVHGDEFE+EE+NDDISQYEV+VRT VHESQQ DEEP  +EQEGTSGP+DV SEAMEESSSS SQ   S
Subjt:  VTQGQLNVDGEDEDLGELPQEVHGDEFEEEEENDDISQYEVRVRTSVHESQQDDEEPLAQEQEGTSGPIDVHSEAMEESSSSYSQSKTS

A0A6J1DRR9 uncharacterized protein LOC1110237611.6e-6773.36Show/hide
Query:  HYQFEHDLVSGDSEHDMEPLEHSDSATVKIECQIAPSTIMVETPPATLQEVLVALNEARGEDPLKDDGNSGVTQGQLNVDGEDEDLGELPQEVHGDEFEE
        H  F++  VSGDSEHDMEPLEHSDSATVKIECQIAPSTIMVETPPATLQEVLVALNEARGEDPLKDDGNSG                             
Subjt:  HYQFEHDLVSGDSEHDMEPLEHSDSATVKIECQIAPSTIMVETPPATLQEVLVALNEARGEDPLKDDGNSGVTQGQLNVDGEDEDLGELPQEVHGDEFEE

Query:  EEENDDISQYEVRVRTSVHESQQDDEEPLAQEQEGTSGPIDVHSEAMEESSSSYSQSKTSSLSSLNVSDPNFVATAEISDEEVNLIKVVKKTQKKKKVAE
                              QDDEEPLAQEQEGTSGPIDVHSEAMEESSSSYSQSKTSSLSSLNVSDPNFVATAEISDEEVNLIKVVKKTQKKKKVAE
Subjt:  EEENDDISQYEVRVRTSVHESQQDDEEPLAQEQEGTSGPIDVHSEAMEESSSSYSQSKTSSLSSLNVSDPNFVATAEISDEEVNLIKVVKKTQKKKKVAE

Query:  IVPTQFLGLGPEPL
        IVPTQFLGLGPEPL
Subjt:  IVPTQFLGLGPEPL

A0A6J1DW11 uncharacterized protein LOC1110236203.7e-1667.44Show/hide
Query:  VHESQQDDEEPLAQEQEGTSGPIDVHSEAMEESSSSYSQSKTSSLSSLNVSDPNFVATAEISDEEVNLIKVVKKTQKKKKVAEIVP
        +HESQQDDEE   QEQEG SG +DV +EA+EESSSS S+ K+ SLSSLNVSDPNFVA A  S+E+V L KVVKK + KK + EIVP
Subjt:  VHESQQDDEEPLAQEQEGTSGPIDVHSEAMEESSSSYSQSKTSSLSSLNVSDPNFVATAEISDEEVNLIKVVKKTQKKKKVAEIVP

A0A6J1DW79 uncharacterized protein LOC1110249644.7e-2752.44Show/hide
Query:  ETPPATLQEVLVALNEARGEDPLKDDGNSGVTQGQLNVDGEDEDLGELPQEVHGDEFEEEEENDDISQYEVRVRTSVHESQQDDEEPLAQEQEGTSGPID
        E   + + ++LVALNEA GEDPL+DDGNS   QG+LNVDGEDEDLG+LPQEVHGDE EEEEENDDISQYEVR+   VHESQ+D  E   +  EG S P+D
Subjt:  ETPPATLQEVLVALNEARGEDPLKDDGNSGVTQGQLNVDGEDEDLGELPQEVHGDEFEEEEENDDISQYEVRVRTSVHESQQDDEEPLAQEQEGTSGPID

Query:  VHSEAMEESSSSYSQSKTSSLSSLNVSDPNFVATAEISDEEVNLIKVVKKTQKKKKVAEIVPTQ
        V +EA  +SSS  S SK +S   +N  +P        ++++ +  K V +   K+  A I P Q
Subjt:  VHSEAMEESSSSYSQSKTSSLSSLNVSDPNFVATAEISDEEVNLIKVVKKTQKKKKVAEIVPTQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTACGCTTGTTTACATGCGACCATTTGGGAGTGCAAATAAATCAAAAGAAGCAAAAAGTCGGAAAAACCTACATGGGAGGCGCCAGGCGCCTGCGTGCCTG
CAGAAAAACTGGTTTTCTTCCAACTTTGCCCTTAATGAAATGCGTCTTCCCATGCGTTTTGGTGGTTCCAATCGATGCATACGTGTAGAAGAAGTGTTCCACTAT
CAGTTTGAGCACGATTTGGTTAGTGGGGACTCAGAACACGACATGGAGCCCTTGGAGCATTCAGATTCAGCCACGGTCAAAATTGAGTGCCAAATTGCGCCTAGC
ACAATTATGGTTGAGACTCCACCGGCCACTCTACAAGAAGTTTTGGTGGCGTTGAATGAAGCAAGGGGAGAAGATCCATTGAAAGATGATGGAAATAGTGGGGTA
ACACAAGGACAATTGAATGTTGATGGAGAGGATGAAGATCTTGGAGAATTACCCCAAGAAGTGCATGGAGATGAGTTTGAAGAGGAAGAAGAAAATGATGATATC
TCTCAATATGAAGTGAGAGTACGAACTTCGGTGCACGAATCTCAGCAAGATGACGAGGAGCCCCTTGCACAAGAGCAAGAAGGAACATCCGGTCCTATAGATGTC
CATAGTGAGGCCATGGAGGAATCATCTTCCTCTTATTCACAAAGTAAGACCTCTTCTTTGTCAAGTTTGAATGTTTCTGACCCAAACTTTGTTGCTACTGCAGAG
ATTTCAGATGAGGAGGTGAATTTGATCAAAGTGGTGAAGAAAACGCAAAAGAAGAAGAAAGTAGCAGAAATTGTGCCAACGCAATTTCTAGGCCTAGGACCCGAG
CCGCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTACGCTTGTTTACATGCGACCATTTGGGAGTGCAAATAAATCAAAAGAAGCAAAAAGTCGGAAAAACCTACATGGGAGGCGCCAGGCGCCTGCGTGCCTG
CAGAAAAACTGGTTTTCTTCCAACTTTGCCCTTAATGAAATGCGTCTTCCCATGCGTTTTGGTGGTTCCAATCGATGCATACGTGTAGAAGAAGTGTTCCACTAT
CAGTTTGAGCACGATTTGGTTAGTGGGGACTCAGAACACGACATGGAGCCCTTGGAGCATTCAGATTCAGCCACGGTCAAAATTGAGTGCCAAATTGCGCCTAGC
ACAATTATGGTTGAGACTCCACCGGCCACTCTACAAGAAGTTTTGGTGGCGTTGAATGAAGCAAGGGGAGAAGATCCATTGAAAGATGATGGAAATAGTGGGGTA
ACACAAGGACAATTGAATGTTGATGGAGAGGATGAAGATCTTGGAGAATTACCCCAAGAAGTGCATGGAGATGAGTTTGAAGAGGAAGAAGAAAATGATGATATC
TCTCAATATGAAGTGAGAGTACGAACTTCGGTGCACGAATCTCAGCAAGATGACGAGGAGCCCCTTGCACAAGAGCAAGAAGGAACATCCGGTCCTATAGATGTC
CATAGTGAGGCCATGGAGGAATCATCTTCCTCTTATTCACAAAGTAAGACCTCTTCTTTGTCAAGTTTGAATGTTTCTGACCCAAACTTTGTTGCTACTGCAGAG
ATTTCAGATGAGGAGGTGAATTTGATCAAAGTGGTGAAGAAAACGCAAAAGAAGAAGAAAGTAGCAGAAATTGTGCCAACGCAATTTCTAGGCCTAGGACCCGAG
CCGCTGTAG
Protein sequenceShow/hide protein sequence
MITLVYMRPFGSANKSKEAKSRKNLHGRRQAPACLQKNWFSSNFALNEMRLPMRFGGSNRCIRVEEVFHYQFEHDLVSGDSEHDMEPLEHSDSATVKIECQIAPS
TIMVETPPATLQEVLVALNEARGEDPLKDDGNSGVTQGQLNVDGEDEDLGELPQEVHGDEFEEEEENDDISQYEVRVRTSVHESQQDDEEPLAQEQEGTSGPIDV
HSEAMEESSSSYSQSKTSSLSSLNVSDPNFVATAEISDEEVNLIKVVKKTQKKKKVAEIVPTQFLGLGPEPL