; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc01g10480 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g10480
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111019515
Genome locationchr1:6486812..6488137
RNA-Seq ExpressionMoc01g10480
SyntenyMoc01g10480
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151603.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111019515 [Momordica charantia]3.9e-10790Show/hide
Query:  MATLPGVRDAHTIPSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRRERKGSKRRAVQAKKPTVPMNEPKTRAAKAKAAEAKKKVVAP
        MATLPGVRDAH IPSN VNPL C TGR KVGENSTQE   EED EDTQTIREMFQYKRRE K SKRRAVQ  KPTVPMNEPKTRAAKAKAAEAKKKVVAP
Subjt:  MATLPGVRDAHTIPSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRRERKGSKRRAVQAKKPTVPMNEPKTRAAKAKAAEAKKKVVAP

Query:  GPVDTIELDLSEGEEVETKWNAANLATRTSLMKSRKIMTELGFDLTLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIR
        GPVD IELDLSEGE+VET WNAANLATRTSLMK  KIMTELGFDLTLGDVPDDWR+TAR KEWRPLIQPIQCEALELVREFYAA HPQSHIAIVRGKEIR
Subjt:  GPVDTIELDLSEGEEVETKWNAANLATRTSLMKSRKIMTELGFDLTLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIR

Query:  FDATQINYTFNIENIRDAVGNKMLVTPTLE
        FDATQINYTFNI+NI+DAVGNKMLVTPTLE
Subjt:  FDATQINYTFNIENIRDAVGNKMLVTPTLE

XP_022152366.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111020110 [Momordica charantia]3.5e-2392.31Show/hide
Query:  MATLPGVRDAHTIPSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRRERKGSK
        MATLPGVRDAHTIPSNTVNPLGCDTGRS+VGENSTQEPTSEEDLED QTIREMFQYKRRE+  SK
Subjt:  MATLPGVRDAHTIPSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRRERKGSK

XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]6.8e-2729.15Show/hide
Query:  RSKVGENSTQEPTSEEDLEDTQTIREMFQYKRRERKGSKRRAVQAKKPTVPMNEPKTRAAKAKAAEAKKKVVAPGPVDTIELDLSEGEEVETKWNAANLA
        + + G +   +  SE   E + +  +    + R R    R A Q +    P  + KT   +  A E  ++     P  T        E+  ++     L 
Subjt:  RSKVGENSTQEPTSEEDLEDTQTIREMFQYKRRERKGSKRRAVQAKKPTVPMNEPKTRAAKAKAAEAKKKVVAPGPVDTIELDLSEGEEVETKWNAANLA

Query:  TRTSLMKSRKIMTELGFDLTLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTFNIENIRDAVGNKMLVT
         R     +R I+ E GFD     VP+  R+   +  W  L  PI   +  LV+EFY A++P       RG E+R                   GN++LV 
Subjt:  TRTSLMKSRKIMTELGFDLTLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTFNIENIRDAVGNKMLVT

Query:  PTLEQLDEALECVGKPSATWDLTTHGKVRLKPEDVSLTAAGWLYIVKNRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTRG
        P+ EQ++EA   + +P  TW ++T GK+ LKP D++  A  W+Y+VKNR++PT +D  + ++RA++VY ++KG++ N+GELI   I  C+ +  G
Subjt:  PTLEQLDEALECVGKPSATWDLTTHGKVRLKPEDVSLTAAGWLYIVKNRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTRG

XP_022158852.1 uncharacterized protein LOC111025316 [Momordica charantia]3.4e-2695.65Show/hide
Query:  MATLPGVRDAHTIPSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRRERKGSKRRAV
        MATLPGVRDAHTIPSN VNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRRE+K SKRRAV
Subjt:  MATLPGVRDAHTIPSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRRERKGSKRRAV

XP_022158884.1 uncharacterized protein LOC111025345 [Momordica charantia]1.5e-2680.95Show/hide
Query:  MATLPGVRDAHTIPSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRRERKGSKRRAVQAKKPTVPMNEPKTR
        MATLPGVRDAH IPSN VN LGCDTGR KVGENSTQEPT ++D EDTQT+REMFQYKRRE+K SK RAVQ KKPTVPMN   TR
Subjt:  MATLPGVRDAHTIPSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRRERKGSKRRAVQAKKPTVPMNEPKTR

TrEMBL top hitse value%identityAlignment
A0A6J1DCL7 LOW QUALITY PROTEIN: uncharacterized protein LOC1110195151.9e-10790Show/hide
Query:  MATLPGVRDAHTIPSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRRERKGSKRRAVQAKKPTVPMNEPKTRAAKAKAAEAKKKVVAP
        MATLPGVRDAH IPSN VNPL C TGR KVGENSTQE   EED EDTQTIREMFQYKRRE K SKRRAVQ  KPTVPMNEPKTRAAKAKAAEAKKKVVAP
Subjt:  MATLPGVRDAHTIPSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRRERKGSKRRAVQAKKPTVPMNEPKTRAAKAKAAEAKKKVVAP

Query:  GPVDTIELDLSEGEEVETKWNAANLATRTSLMKSRKIMTELGFDLTLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIR
        GPVD IELDLSEGE+VET WNAANLATRTSLMK  KIMTELGFDLTLGDVPDDWR+TAR KEWRPLIQPIQCEALELVREFYAA HPQSHIAIVRGKEIR
Subjt:  GPVDTIELDLSEGEEVETKWNAANLATRTSLMKSRKIMTELGFDLTLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIR

Query:  FDATQINYTFNIENIRDAVGNKMLVTPTLE
        FDATQINYTFNI+NI+DAVGNKMLVTPTLE
Subjt:  FDATQINYTFNIENIRDAVGNKMLVTPTLE

A0A6J1DHH9 LOW QUALITY PROTEIN: uncharacterized protein LOC1110201101.7e-2392.31Show/hide
Query:  MATLPGVRDAHTIPSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRRERKGSK
        MATLPGVRDAHTIPSNTVNPLGCDTGRS+VGENSTQEPTSEEDLED QTIREMFQYKRRE+  SK
Subjt:  MATLPGVRDAHTIPSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRRERKGSK

A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220073.3e-2729.15Show/hide
Query:  RSKVGENSTQEPTSEEDLEDTQTIREMFQYKRRERKGSKRRAVQAKKPTVPMNEPKTRAAKAKAAEAKKKVVAPGPVDTIELDLSEGEEVETKWNAANLA
        + + G +   +  SE   E + +  +    + R R    R A Q +    P  + KT   +  A E  ++     P  T        E+  ++     L 
Subjt:  RSKVGENSTQEPTSEEDLEDTQTIREMFQYKRRERKGSKRRAVQAKKPTVPMNEPKTRAAKAKAAEAKKKVVAPGPVDTIELDLSEGEEVETKWNAANLA

Query:  TRTSLMKSRKIMTELGFDLTLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTFNIENIRDAVGNKMLVT
         R     +R I+ E GFD     VP+  R+   +  W  L  PI   +  LV+EFY A++P       RG E+R                   GN++LV 
Subjt:  TRTSLMKSRKIMTELGFDLTLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTFNIENIRDAVGNKMLVT

Query:  PTLEQLDEALECVGKPSATWDLTTHGKVRLKPEDVSLTAAGWLYIVKNRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTRG
        P+ EQ++EA   + +P  TW ++T GK+ LKP D++  A  W+Y+VKNR++PT +D  + ++RA++VY ++KG++ N+GELI   I  C+ +  G
Subjt:  PTLEQLDEALECVGKPSATWDLTTHGKVRLKPEDVSLTAAGWLYIVKNRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTRG

A0A6J1DY94 uncharacterized protein LOC1110253161.6e-2695.65Show/hide
Query:  MATLPGVRDAHTIPSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRRERKGSKRRAV
        MATLPGVRDAHTIPSN VNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRRE+K SKRRAV
Subjt:  MATLPGVRDAHTIPSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRRERKGSKRRAV

A0A6J1E0Q9 uncharacterized protein LOC1110253457.4e-2780.95Show/hide
Query:  MATLPGVRDAHTIPSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRRERKGSKRRAVQAKKPTVPMNEPKTR
        MATLPGVRDAH IPSN VN LGCDTGR KVGENSTQEPT ++D EDTQT+REMFQYKRRE+K SK RAVQ KKPTVPMN   TR
Subjt:  MATLPGVRDAHTIPSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRRERKGSKRRAVQAKKPTVPMNEPKTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACTCTACCAGGGGTAAGGGATGCTCACACTATTCCTTCTAATACAGTTAACCCGCTTGGGTGTGATACAGGTAGATCCAAGGTTGGGGAGAATAGTACT
CAAGAACCTACCAGCGAAGAAGATCTTGAGGACACGCAGACGATAAGGGAAATGTTCCAATACAAGAGGCGGGAGAGAAAAGGTTCAAAACGTCGTGCAGTTCAG
GCTAAGAAGCCAACAGTGCCCATGAATGAACCTAAAACGAGAGCTGCGAAAGCTAAAGCAGCTGAAGCTAAGAAGAAGGTAGTGGCACCTGGGCCAGTTGATACA
ATTGAACTAGACTTGTCTGAGGGAGAGGAGGTCGAGACGAAATGGAACGCGGCAAATTTAGCCACTCGAACTTCATTAATGAAATCCCGTAAGATTATGACAGAA
TTGGGATTCGATCTCACTCTAGGAGATGTGCCTGATGATTGGAGGGAGACCGCTAGAGACAAAGAGTGGAGACCACTCATTCAGCCCATACAATGTGAGGCTTTG
GAGTTAGTCAGAGAATTCTATGCTGCTGTCCATCCCCAGTCACATATAGCCATAGTGCGCGGGAAGGAAATACGGTTTGATGCCACTCAGATCAACTACACCTTC
AACATTGAGAATATCAGAGATGCTGTGGGCAATAAGATGTTAGTGACTCCGACTCTGGAACAGCTTGATGAGGCTTTAGAATGTGTTGGGAAGCCCTCTGCCACT
TGGGATTTGACTACTCATGGCAAGGTACGACTAAAACCCGAGGATGTTTCCCTAACTGCTGCAGGATGGTTATACATAGTCAAAAACAGAATTCTGCCAACGGAG
CATGATGAGCATGTCACTCAGGATAGGGCACTGCTGGTTTATGCCATGCTAAAGGGCATAGATGTGAATTATGGAGAATTGATCAATACTAGTATCCATGAGTGT
GCCCACCGAACACGTGGTAAGCTTTATCACCCCCGTTTGGTCACTTCTTTATGCTTGCGACAAGGTGTACAGCTCCCTGAGGATCAAATTAAGAGAGATGCCCCA
ATTGTGGAAGAGAAGAATATTCGGCGTATTATCGCCCATGCGTTACAAAGAAGGGAAGGTACTGGGATGTCTCCTACATCGGAGATCCGTCGTCTTCGAGAGAAG
AACCACCAGCTGCGAGATCAGGTTCGAGAAGTCGTGCAACATATCTACAACTTAAGGGCTTCATTGGATTTTGCGGTTTTACCTTCATGGCCTCTAGTGCTAGCT
GCTATCCTTGGTCATCCATCTCCCAGTATTGACACTGATCCTAGTCCACAACCTCCGACTTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACTCTACCAGGGGTAAGGGATGCTCACACTATTCCTTCTAATACAGTTAACCCGCTTGGGTGTGATACAGGTAGATCCAAGGTTGGGGAGAATAGTACT
CAAGAACCTACCAGCGAAGAAGATCTTGAGGACACGCAGACGATAAGGGAAATGTTCCAATACAAGAGGCGGGAGAGAAAAGGTTCAAAACGTCGTGCAGTTCAG
GCTAAGAAGCCAACAGTGCCCATGAATGAACCTAAAACGAGAGCTGCGAAAGCTAAAGCAGCTGAAGCTAAGAAGAAGGTAGTGGCACCTGGGCCAGTTGATACA
ATTGAACTAGACTTGTCTGAGGGAGAGGAGGTCGAGACGAAATGGAACGCGGCAAATTTAGCCACTCGAACTTCATTAATGAAATCCCGTAAGATTATGACAGAA
TTGGGATTCGATCTCACTCTAGGAGATGTGCCTGATGATTGGAGGGAGACCGCTAGAGACAAAGAGTGGAGACCACTCATTCAGCCCATACAATGTGAGGCTTTG
GAGTTAGTCAGAGAATTCTATGCTGCTGTCCATCCCCAGTCACATATAGCCATAGTGCGCGGGAAGGAAATACGGTTTGATGCCACTCAGATCAACTACACCTTC
AACATTGAGAATATCAGAGATGCTGTGGGCAATAAGATGTTAGTGACTCCGACTCTGGAACAGCTTGATGAGGCTTTAGAATGTGTTGGGAAGCCCTCTGCCACT
TGGGATTTGACTACTCATGGCAAGGTACGACTAAAACCCGAGGATGTTTCCCTAACTGCTGCAGGATGGTTATACATAGTCAAAAACAGAATTCTGCCAACGGAG
CATGATGAGCATGTCACTCAGGATAGGGCACTGCTGGTTTATGCCATGCTAAAGGGCATAGATGTGAATTATGGAGAATTGATCAATACTAGTATCCATGAGTGT
GCCCACCGAACACGTGGTAAGCTTTATCACCCCCGTTTGGTCACTTCTTTATGCTTGCGACAAGGTGTACAGCTCCCTGAGGATCAAATTAAGAGAGATGCCCCA
ATTGTGGAAGAGAAGAATATTCGGCGTATTATCGCCCATGCGTTACAAAGAAGGGAAGGTACTGGGATGTCTCCTACATCGGAGATCCGTCGTCTTCGAGAGAAG
AACCACCAGCTGCGAGATCAGGTTCGAGAAGTCGTGCAACATATCTACAACTTAAGGGCTTCATTGGATTTTGCGGTTTTACCTTCATGGCCTCTAGTGCTAGCT
GCTATCCTTGGTCATCCATCTCCCAGTATTGACACTGATCCTAGTCCACAACCTCCGACTTCATGA
Protein sequenceShow/hide protein sequence
MATLPGVRDAHTIPSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRRERKGSKRRAVQAKKPTVPMNEPKTRAAKAKAAEAKKKVVAPGPVDT
IELDLSEGEEVETKWNAANLATRTSLMKSRKIMTELGFDLTLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTF
NIENIRDAVGNKMLVTPTLEQLDEALECVGKPSATWDLTTHGKVRLKPEDVSLTAAGWLYIVKNRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHEC
AHRTRGKLYHPRLVTSLCLRQGVQLPEDQIKRDAPIVEEKNIRRIIAHALQRREGTGMSPTSEIRRLREKNHQLRDQVREVVQHIYNLRASLDFAVLPSWPLVLA
AILGHPSPSIDTDPSPQPPTS