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Moc01g10660 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g10660
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr1:6571152..6575926
RNA-Seq ExpressionMoc01g10660
SyntenyMoc01g10660
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152352.1 uncharacterized protein LOC111020095 [Momordica charantia]2.0e-4190.1Show/hide
Query:  MFTSIIALLTAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCSQALAPNATVAVRNNYDRWIKANDKAKVYILTSISDVLAKKHEDTVTAKEIMDSLQS
        M TSIIALL AQRLNGENYKQWKSNLNTILVIDDL+FVLQEDC QA APNATVAVR  YDRWIKANDKAKVYIL SISDVLAKKHEDT+TAKEIMDSLQS
Subjt:  MFTSIIALLTAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCSQALAPNATVAVRNNYDRWIKANDKAKVYILTSISDVLAKKHEDTVTAKEIMDSLQS

Query:  I
        +
Subjt:  I

XP_022157449.1 uncharacterized protein LOC111024145 [Momordica charantia]1.0e-3274.75Show/hide
Query:  TSIIALLTAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCSQALAPNATVAVRNNYDRWIKANDKAKVYILTSISDVLAKKHEDTVTAKEIMDSLQSI
        TSIIALL A++ N ENY QWK+NLNTILV+DDLRF+L E+C QA  PNA  A R+ YDRWIKANDKA VYILTSISDVL+KKHE  VTA+EIMDSLQ I
Subjt:  TSIIALLTAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCSQALAPNATVAVRNNYDRWIKANDKAKVYILTSISDVLAKKHEDTVTAKEIMDSLQSI

XP_022158062.1 uncharacterized protein LOC111024637 [Momordica charantia]4.0e-3783.17Show/hide
Query:  MFTSIIALLTAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCSQALAPNATVAVRNNYDRWIKANDKAKVYILTSISDVLAKKHEDTVTAKEIMDSLQS
        M TSII LL AQ+LN ENYKQWKSN+NTIL+IDDLRFVLQEDC QA APNATVAVRN YDRWIKANDKAKV IL SISDVLAKKHE++V  KEIMDSLQS
Subjt:  MFTSIIALLTAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCSQALAPNATVAVRNNYDRWIKANDKAKVYILTSISDVLAKKHEDTVTAKEIMDSLQS

Query:  I
        +
Subjt:  I

XP_022158197.1 uncharacterized protein LOC111024734 [Momordica charantia]2.5e-3986.14Show/hide
Query:  MFTSIIALLTAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCSQALAPNATVAVRNNYDRWIKANDKAKVYILTSISDVLAKKHEDTVTAKEIMDSLQS
        M  SIIALL AQ+LNGENY+QWKSNLNTILVIDDLRFVLQEDC QA   NATVAVRN YDRWIK+NDKAKVYIL SISDVLAKKHEDTVT KEIMDSLQS
Subjt:  MFTSIIALLTAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCSQALAPNATVAVRNNYDRWIKANDKAKVYILTSISDVLAKKHEDTVTAKEIMDSLQS

Query:  I
        +
Subjt:  I

XP_022158202.1 uncharacterized protein LOC111024739 [Momordica charantia]3.6e-3068.32Show/hide
Query:  MFTSIIALLTAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCSQALAPNATVAVRNNYDRWIKANDKAKVYILTSISDVLAKKHEDTVTAKEIMDSLQS
        M TS+IALL  ++LNG+NY QWK+NLN ILV+DDLRFVL E+C Q   PNA  A R+ YDRWIKANDKAKVYI  SISDVLAKKH+  VT +EIMDSL+ 
Subjt:  MFTSIIALLTAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCSQALAPNATVAVRNNYDRWIKANDKAKVYILTSISDVLAKKHEDTVTAKEIMDSLQS

Query:  I
        +
Subjt:  I

TrEMBL top hitse value%identityAlignment
A0A6J1DFZ2 uncharacterized protein LOC1110200959.9e-4290.1Show/hide
Query:  MFTSIIALLTAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCSQALAPNATVAVRNNYDRWIKANDKAKVYILTSISDVLAKKHEDTVTAKEIMDSLQS
        M TSIIALL AQRLNGENYKQWKSNLNTILVIDDL+FVLQEDC QA APNATVAVR  YDRWIKANDKAKVYIL SISDVLAKKHEDT+TAKEIMDSLQS
Subjt:  MFTSIIALLTAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCSQALAPNATVAVRNNYDRWIKANDKAKVYILTSISDVLAKKHEDTVTAKEIMDSLQS

Query:  I
        +
Subjt:  I

A0A6J1DW68 uncharacterized protein LOC1110246371.9e-3783.17Show/hide
Query:  MFTSIIALLTAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCSQALAPNATVAVRNNYDRWIKANDKAKVYILTSISDVLAKKHEDTVTAKEIMDSLQS
        M TSII LL AQ+LN ENYKQWKSN+NTIL+IDDLRFVLQEDC QA APNATVAVRN YDRWIKANDKAKV IL SISDVLAKKHE++V  KEIMDSLQS
Subjt:  MFTSIIALLTAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCSQALAPNATVAVRNNYDRWIKANDKAKVYILTSISDVLAKKHEDTVTAKEIMDSLQS

Query:  I
        +
Subjt:  I

A0A6J1DWI4 uncharacterized protein LOC1110241454.9e-3374.75Show/hide
Query:  TSIIALLTAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCSQALAPNATVAVRNNYDRWIKANDKAKVYILTSISDVLAKKHEDTVTAKEIMDSLQSI
        TSIIALL A++ N ENY QWK+NLNTILV+DDLRF+L E+C QA  PNA  A R+ YDRWIKANDKA VYILTSISDVL+KKHE  VTA+EIMDSLQ I
Subjt:  TSIIALLTAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCSQALAPNATVAVRNNYDRWIKANDKAKVYILTSISDVLAKKHEDTVTAKEIMDSLQSI

A0A6J1DWL0 uncharacterized protein LOC1110247341.2e-3986.14Show/hide
Query:  MFTSIIALLTAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCSQALAPNATVAVRNNYDRWIKANDKAKVYILTSISDVLAKKHEDTVTAKEIMDSLQS
        M  SIIALL AQ+LNGENY+QWKSNLNTILVIDDLRFVLQEDC QA   NATVAVRN YDRWIK+NDKAKVYIL SISDVLAKKHEDTVT KEIMDSLQS
Subjt:  MFTSIIALLTAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCSQALAPNATVAVRNNYDRWIKANDKAKVYILTSISDVLAKKHEDTVTAKEIMDSLQS

Query:  I
        +
Subjt:  I

A0A6J1DWL4 uncharacterized protein LOC1110247391.7e-3068.32Show/hide
Query:  MFTSIIALLTAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCSQALAPNATVAVRNNYDRWIKANDKAKVYILTSISDVLAKKHEDTVTAKEIMDSLQS
        M TS+IALL  ++LNG+NY QWK+NLN ILV+DDLRFVL E+C Q   PNA  A R+ YDRWIKANDKAKVYI  SISDVLAKKH+  VT +EIMDSL+ 
Subjt:  MFTSIIALLTAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCSQALAPNATVAVRNNYDRWIKANDKAKVYILTSISDVLAKKHEDTVTAKEIMDSLQS

Query:  I
        +
Subjt:  I

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAATAGTTCCTTGCGAACACTCGATATGCAACGTAGCACCTGAGCAACTCAATGCAACTCTCGAGGATGCTCGCCTTTGGGAGCCAAGGGTGGTCGGGCAG
ACCCCTCCTAGGGAGTGGCGAGTTAAAGTGACATGGGGTAACTCCCCTCGTCACTGGTTTTTATGGGGAAAATTTGCAGAAAGGTTCTGCAAAACAGAACAACAA
AGATCTCCCAAGTCCGGGTCGCTCGAAAGTCGTTTGTGGCATCGGATTGGGCAAAAATTGCAGAAAACAGCGAAAAAGACGAAGCAGACTGCGCAGACAGTGCCA
TGGCGCTGCGGGACAGCACACAGCGCCACGGCGCTGCACTGTAGCGCCGCGGCTCTATGCAGCGCCTTGGCGCCATGCCAGAGCGCCGCGGCGCTGCTGCTGCAG
CAACGCCGTGGCGTTGTCTTTAGGCGCCGAGGCGCTGTCCCGGGTATCTTTCGACGCGGTTCCGAGGCTCCGGTTCACGGTTCGAGGGTGGATGCAGATTATTGG
GGTGGACCTCTGAGGTCCGAAAATGTTGGGTCACACTTACGAGGAGTTGTTAACATGTTTACTTCTATTATTGCACTCTTAACCGCGCAAAGACTTAATGGCGAA
AATTACAAACAATGGAAGTCAAACCTTAACACTATTCTCGTGATAGATGATCTTAGGTTCGTCTTGCAAGAGGATTGTTCTCAAGCTCTTGCGCCTAACGCCACT
GTGGCGGTGCGCAACAACTATGACAGGTGGATCAAGGCCAATGACAAGGCCAAGGTCTACATCTTGACGAGCATATCTGATGTGCTTGCCAAGAAGCACGAGGAC
ACGGTCACCGCTAAGGAGATCATGGACTCGCTGCAGAGCATTTTGGACAACCGTCCTCACAGGCTCGACGTGAAGCCCTTAAGTTCGTTTACAACTCCCGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAATAGTTCCTTGCGAACACTCGATATGCAACGTAGCACCTGAGCAACTCAATGCAACTCTCGAGGATGCTCGCCTTTGGGAGCCAAGGGTGGTCGGGCAG
ACCCCTCCTAGGGAGTGGCGAGTTAAAGTGACATGGGGTAACTCCCCTCGTCACTGGTTTTTATGGGGAAAATTTGCAGAAAGGTTCTGCAAAACAGAACAACAA
AGATCTCCCAAGTCCGGGTCGCTCGAAAGTCGTTTGTGGCATCGGATTGGGCAAAAATTGCAGAAAACAGCGAAAAAGACGAAGCAGACTGCGCAGACAGTGCCA
TGGCGCTGCGGGACAGCACACAGCGCCACGGCGCTGCACTGTAGCGCCGCGGCTCTATGCAGCGCCTTGGCGCCATGCCAGAGCGCCGCGGCGCTGCTGCTGCAG
CAACGCCGTGGCGTTGTCTTTAGGCGCCGAGGCGCTGTCCCGGGTATCTTTCGACGCGGTTCCGAGGCTCCGGTTCACGGTTCGAGGGTGGATGCAGATTATTGG
GGTGGACCTCTGAGGTCCGAAAATGTTGGGTCACACTTACGAGGAGTTGTTAACATGTTTACTTCTATTATTGCACTCTTAACCGCGCAAAGACTTAATGGCGAA
AATTACAAACAATGGAAGTCAAACCTTAACACTATTCTCGTGATAGATGATCTTAGGTTCGTCTTGCAAGAGGATTGTTCTCAAGCTCTTGCGCCTAACGCCACT
GTGGCGGTGCGCAACAACTATGACAGGTGGATCAAGGCCAATGACAAGGCCAAGGTCTACATCTTGACGAGCATATCTGATGTGCTTGCCAAGAAGCACGAGGAC
ACGGTCACCGCTAAGGAGATCATGGACTCGCTGCAGAGCATTTTGGACAACCGTCCTCACAGGCTCGACGTGAAGCCCTTAAGTTCGTTTACAACTCCCGCATGA
Protein sequenceShow/hide protein sequence
MQIVPCEHSICNVAPEQLNATLEDARLWEPRVVGQTPPREWRVKVTWGNSPRHWFLWGKFAERFCKTEQQRSPKSGSLESRLWHRIGQKLQKTAKKTKQTAQTVP
WRCGTAHSATALHCSAAALCSALAPCQSAAALLLQQRRGVVFRRRGAVPGIFRRGSEAPVHGSRVDADYWGGPLRSENVGSHLRGVVNMFTSIIALLTAQRLNGE
NYKQWKSNLNTILVIDDLRFVLQEDCSQALAPNATVAVRNNYDRWIKANDKAKVYILTSISDVLAKKHEDTVTAKEIMDSLQSILDNRPHRLDVKPLSSFTTPA