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Moc01g12480 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g12480
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr1:7606726..7607415
RNA-Seq ExpressionMoc01g12480
SyntenyMoc01g12480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KZT76280.1 putative inactive receptor-like protein kinase [Dorcoceras hygrometricum]7.1e-0945.68Show/hide
Query:  NQNSLLVNPGNKISIVNLNDENFLLWRLQVLTALQGHGLEKFIDPEAIIPPEFVQSEDEFASIPTRNPEFLNWKRPGQVKY
        N   LLVNP N+I+ V L D+NFLLW LQVL  ++G GLE FI     IPP   Q+  E  +    NP F+ W R  Q+ +
Subjt:  NQNSLLVNPGNKISIVNLNDENFLLWRLQVLTALQGHGLEKFIDPEAIIPPEFVQSEDEFASIPTRNPEFLNWKRPGQVKY

KZV26211.1 hypothetical protein F511_28557 [Dorcoceras hygrometricum]1.0e-1049.4Show/hide
Query:  TPNQNSLLVNPGNKISIVNLNDENFLLWRLQVLTALQGHGLEKFIDPEAIIPPEFVQSEDEFASIPTRNPEFLNWKRPGQVKY
        T N   LLVNP N+I+ V L+DENFLLWRLQVL  ++G GLE FI    ++P + V+SE+  A   T NP F+ W R  Q+ +
Subjt:  TPNQNSLLVNPGNKISIVNLNDENFLLWRLQVLTALQGHGLEKFIDPEAIIPPEFVQSEDEFASIPTRNPEFLNWKRPGQVKY

XP_022148749.1 uncharacterized protein LOC111017341 isoform X1 [Momordica charantia]1.2e-0850Show/hide
Query:  SERNSELVTPNQN----SLLVNPGNKISIVNLNDENFLLWRLQVLTALQGHGLEKFIDPEAIIPPEFVQSED
        S  N+E+ +   N    S  +NPGNKIS V L DENFLLW+ QVLT L+GHGLE +I+ +   PP+ +Q  D
Subjt:  SERNSELVTPNQN----SLLVNPGNKISIVNLNDENFLLWRLQVLTALQGHGLEKFIDPEAIIPPEFVQSED

XP_022154487.1 uncharacterized protein LOC111021757 [Momordica charantia]6.2e-1342.74Show/hide
Query:  MALSSSERNSELVTPNQNSLLVNPGNKISIVNLNDENFLLWRLQVLTALQGHGLEKFIDPEAIIPPEFVQ-SEDEFASIP-TRNPEFLNWKRPGQVKYFM
        MA  SS RNS+     Q S  +NPG+K+SIV LND+N LLW+ Q+ TALQG+GLE +ID     P +FVQ +EDE +S    +NP +  W +  ++   +
Subjt:  MALSSSERNSELVTPNQNSLLVNPGNKISIVNLNDENFLLWRLQVLTALQGHGLEKFIDPEAIIPPEFVQ-SEDEFASIP-TRNPEFLNWKRPGQVKYFM

Query:  ASWLHIHWQEDHIMHLL
        ++WL     ED +  +L
Subjt:  ASWLHIHWQEDHIMHLL

XP_022159146.1 uncharacterized protein LOC111025572 [Momordica charantia]1.8e-2861.74Show/hide
Query:  MALSSSERNSELVTPNQNSLLVNPGNKISIVNLNDENFLLWRLQVLTALQGHGLEKFIDPEAIIPPEFVQSEDEFASIPTRNPEFLNWKRPGQVKYFMAS
        MA+SSSE +S +V  NQNS +VNPGNKIS + LNDENFLLWRLQ+ TALQGHGL KFIDPEA IP EFVQS DE +S+P+ NPEF+NWKR  ++   + S
Subjt:  MALSSSERNSELVTPNQNSLLVNPGNKISIVNLNDENFLLWRLQVLTALQGHGLEKFIDPEAIIPPEFVQSEDEFASIPTRNPEFLNWKRPGQVKYFMAS

Query:  WLHIHWQEDHIMHLL
        WL     E+ +  +L
Subjt:  WLHIHWQEDHIMHLL

TrEMBL top hitse value%identityAlignment
A0A2Z7A079 Putative inactive receptor-like protein kinase3.5e-0945.68Show/hide
Query:  NQNSLLVNPGNKISIVNLNDENFLLWRLQVLTALQGHGLEKFIDPEAIIPPEFVQSEDEFASIPTRNPEFLNWKRPGQVKY
        N   LLVNP N+I+ V L D+NFLLW LQVL  ++G GLE FI     IPP   Q+  E  +    NP F+ W R  Q+ +
Subjt:  NQNSLLVNPGNKISIVNLNDENFLLWRLQVLTALQGHGLEKFIDPEAIIPPEFVQSEDEFASIPTRNPEFLNWKRPGQVKY

A0A2Z7AWD6 Uncharacterized protein4.8e-1149.4Show/hide
Query:  TPNQNSLLVNPGNKISIVNLNDENFLLWRLQVLTALQGHGLEKFIDPEAIIPPEFVQSEDEFASIPTRNPEFLNWKRPGQVKY
        T N   LLVNP N+I+ V L+DENFLLWRLQVL  ++G GLE FI    ++P + V+SE+  A   T NP F+ W R  Q+ +
Subjt:  TPNQNSLLVNPGNKISIVNLNDENFLLWRLQVLTALQGHGLEKFIDPEAIIPPEFVQSEDEFASIPTRNPEFLNWKRPGQVKY

A0A5A7UB21 Keratin, type II cytoskeletal 1-like5.9e-0938.38Show/hide
Query:  SERNSELVTPNQNSLLVNPGNKISIVNLNDENFLLWRLQVLTALQGHGLEKFIDPEAIIPPEFVQSEDEFASIPTR--NPEFLNWKRPGQVKYFMASWL
        S  +S L   N    +   GNKIS+V L+D+NFLLW+ Q+LTAL+ + LE F + E   P +++ S    ++  TR  NPE+  WKR  ++   ++ WL
Subjt:  SERNSELVTPNQNSLLVNPGNKISIVNLNDENFLLWRLQVLTALQGHGLEKFIDPEAIIPPEFVQSEDEFASIPTR--NPEFLNWKRPGQVKYFMASWL

A0A6J1DLT9 uncharacterized protein LOC1110217573.0e-1342.74Show/hide
Query:  MALSSSERNSELVTPNQNSLLVNPGNKISIVNLNDENFLLWRLQVLTALQGHGLEKFIDPEAIIPPEFVQ-SEDEFASIP-TRNPEFLNWKRPGQVKYFM
        MA  SS RNS+     Q S  +NPG+K+SIV LND+N LLW+ Q+ TALQG+GLE +ID     P +FVQ +EDE +S    +NP +  W +  ++   +
Subjt:  MALSSSERNSELVTPNQNSLLVNPGNKISIVNLNDENFLLWRLQVLTALQGHGLEKFIDPEAIIPPEFVQ-SEDEFASIP-TRNPEFLNWKRPGQVKYFM

Query:  ASWLHIHWQEDHIMHLL
        ++WL     ED +  +L
Subjt:  ASWLHIHWQEDHIMHLL

A0A6J1E314 uncharacterized protein LOC1110255728.7e-2961.74Show/hide
Query:  MALSSSERNSELVTPNQNSLLVNPGNKISIVNLNDENFLLWRLQVLTALQGHGLEKFIDPEAIIPPEFVQSEDEFASIPTRNPEFLNWKRPGQVKYFMAS
        MA+SSSE +S +V  NQNS +VNPGNKIS + LNDENFLLWRLQ+ TALQGHGL KFIDPEA IP EFVQS DE +S+P+ NPEF+NWKR  ++   + S
Subjt:  MALSSSERNSELVTPNQNSLLVNPGNKISIVNLNDENFLLWRLQVLTALQGHGLEKFIDPEAIIPPEFVQSEDEFASIPTRNPEFLNWKRPGQVKYFMAS

Query:  WLHIHWQEDHIMHLL
        WL     E+ +  +L
Subjt:  WLHIHWQEDHIMHLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTTTCTTCATCCGAGAGAAATTCTGAGCTAGTTACACCTAATCAGAATAGTTTGCTTGTGAATCCTGGAAATAAAATTTCCATAGTAAATCTAAACGAC
GAAAATTTTCTGCTATGGAGGTTACAAGTACTTACAGCACTGCAAGGCCACGGGTTGGAGAAATTCATCGATCCAGAGGCTATAATTCCACCTGAATTTGTTCAA
TCTGAAGATGAATTTGCTTCTATTCCAACTCGGAATCCTGAATTTCTCAATTGGAAGAGACCAGGACAAGTTAAGTACTTCATGGCTTCTTGGCTTCATATTCAT
TGGCAAGAAGATCACATTATGCATCTTCTTGCTGGCCTTGGAACAAATCATTCTCATCAATCTTCAATTAATGCACAATCTACTCCTCATTTTGCTCCAAGTTTT
GGTCCATCACAGCAACAACATCCAGCACCAATGAATGCTTTTCTAGTAGGTCCAGATCTGAAGAAAGGATACAAATTGGTATCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCTTTCTTCATCCGAGAGAAATTCTGAGCTAGTTACACCTAATCAGAATAGTTTGCTTGTGAATCCTGGAAATAAAATTTCCATAGTAAATCTAAACGAC
GAAAATTTTCTGCTATGGAGGTTACAAGTACTTACAGCACTGCAAGGCCACGGGTTGGAGAAATTCATCGATCCAGAGGCTATAATTCCACCTGAATTTGTTCAA
TCTGAAGATGAATTTGCTTCTATTCCAACTCGGAATCCTGAATTTCTCAATTGGAAGAGACCAGGACAAGTTAAGTACTTCATGGCTTCTTGGCTTCATATTCAT
TGGCAAGAAGATCACATTATGCATCTTCTTGCTGGCCTTGGAACAAATCATTCTCATCAATCTTCAATTAATGCACAATCTACTCCTCATTTTGCTCCAAGTTTT
GGTCCATCACAGCAACAACATCCAGCACCAATGAATGCTTTTCTAGTAGGTCCAGATCTGAAGAAAGGATACAAATTGGTATCCTGA
Protein sequenceShow/hide protein sequence
MALSSSERNSELVTPNQNSLLVNPGNKISIVNLNDENFLLWRLQVLTALQGHGLEKFIDPEAIIPPEFVQSEDEFASIPTRNPEFLNWKRPGQVKYFMASWLHIH
WQEDHIMHLLAGLGTNHSHQSSINAQSTPHFAPSFGPSQQQHPAPMNAFLVGPDLKKGYKLVS