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Moc01g12830 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g12830
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Genome locationchr1:7807015..7808140
RNA-Seq ExpressionMoc01g12830
SyntenyMoc01g12830
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]2.3e-5173.29Show/hide
Query:  KVKALKARCQKKDNVFDDGEMGESPFTLDILEEPKPAMFKTFAMKPYDGSKDPKDYVEVFKGFIDFQAGSDAMKCRAFHIALIESTWLWYRRLSTRSIST
        +V+ALKA+C+KK++ FDDG++GESPFT DILE   P  FKT  MKPYDGSKDPKDYVEVF+G +DFQA +DA+KCR F IAL  S  LWYRRL  RSIST
Subjt:  KVKALKARCQKKDNVFDDGEMGESPFTLDILEEPKPAMFKTFAMKPYDGSKDPKDYVEVFKGFIDFQAGSDAMKCRAFHIALIESTWLWYRRLSTRSIST

Query:  YSQLRKEFISQFSSRQYDQKTATHLATIRQKEDETLMEYVTKFQVE
        YSQLRKEFI QFSSR YD+KTATHL TIRQKE ETL EYVT+FQ E
Subjt:  YSQLRKEFISQFSSRQYDQKTATHLATIRQKEDETLMEYVTKFQVE

XP_022156088.1 uncharacterized protein LOC111023060 [Momordica charantia]6.7e-5171.92Show/hide
Query:  KVKALKARCQKKDNVFDDGEMGESPFTLDILEEPKPAMFKTFAMKPYDGSKDPKDYVEVFKGFIDFQAGSDAMKCRAFHIALIESTWLWYRRLSTRSIST
        +V+ALK RC+KK++ FDDG++GESPFT DILE   P  FKT  MK YDGSKDPKDYVEVF+G +DFQA +DA+KCRAF IAL  S  LWYRRL  RSIST
Subjt:  KVKALKARCQKKDNVFDDGEMGESPFTLDILEEPKPAMFKTFAMKPYDGSKDPKDYVEVFKGFIDFQAGSDAMKCRAFHIALIESTWLWYRRLSTRSIST

Query:  YSQLRKEFISQFSSRQYDQKTATHLATIRQKEDETLMEYVTKFQVE
        YSQLRKEFISQF SR YD+KT THLATIRQKE +TL EY+T+FQ E
Subjt:  YSQLRKEFISQFSSRQYDQKTATHLATIRQKEDETLMEYVTKFQVE

XP_022156542.1 uncharacterized protein LOC111023421 [Momordica charantia]2.3e-5166.67Show/hide
Query:  RADYSRREGDL-RKVKALKARCQKKDNVFDDGEMGESPFTLDILEEPKPAMFKTFAMKPYDGSKDPKDYVEVFKGFIDFQAGSDAMKCRAFHIALIESTW
        R ++ +  G+L  +V+ALKA+C++KD+  +DG++GESPFT D+LE P P  FK   +KPYDG+KDPKDYVEVF+G +DFQA SDA+KCRAF IAL  S  
Subjt:  RADYSRREGDL-RKVKALKARCQKKDNVFDDGEMGESPFTLDILEEPKPAMFKTFAMKPYDGSKDPKDYVEVFKGFIDFQAGSDAMKCRAFHIALIESTW

Query:  LWYRRLSTRSISTYSQLRKEFISQFSSRQYDQKTATHLATIRQKEDETLMEYVTKFQVE
        LWYRRL  RSISTYSQLR+EF++QFSSR YD+KTATHLATIRQKE ETL EYVT+FQ E
Subjt:  LWYRRLSTRSISTYSQLRKEFISQFSSRQYDQKTATHLATIRQKEDETLMEYVTKFQVE

XP_022157897.1 uncharacterized protein LOC111024503 [Momordica charantia]2.0e-5070Show/hide
Query:  SRREGDLRK------VKALKARCQKKDNVFDDGEMGESPFTLDILEEPKPAMFKTFAMKPYDGSKDPKDYVEVFKGFIDFQAGSDAMKCRAFHIALIEST
        +R E DL K      V+ALKA+C+KK+  FDDG++GESPFT DILE P P  FKT  MK YD SKDPKDYVEVF+G +DFQA +DA+KC AF IAL  S 
Subjt:  SRREGDLRK------VKALKARCQKKDNVFDDGEMGESPFTLDILEEPKPAMFKTFAMKPYDGSKDPKDYVEVFKGFIDFQAGSDAMKCRAFHIALIEST

Query:  WLWYRRLSTRSISTYSQLRKEFISQFSSRQYDQKTATHLATIRQKEDETLMEYVTKFQVE
         LWYRRL  RSISTYSQLRKEFISQF SR YD+KTATHLATIRQKE ETL EYVT+FQ E
Subjt:  WLWYRRLSTRSISTYSQLRKEFISQFSSRQYDQKTATHLATIRQKEDETLMEYVTKFQVE

XP_022159250.1 uncharacterized protein LOC111025663 [Momordica charantia]6.5e-5476.03Show/hide
Query:  KVKALKARCQKKDNVFDDGEMGESPFTLDILEEPKPAMFKTFAMKPYDGSKDPKDYVEVFKGFIDFQAGSDAMKCRAFHIALIESTWLWYRRLSTRSIST
        +V+ALKARC+KK+  FDDG++GESPFT DILE P P  FKT  MKPYDGSKDPKDYVEVF+G +DFQA +DA+KCRAF IAL +S  LWYRRL  RSIST
Subjt:  KVKALKARCQKKDNVFDDGEMGESPFTLDILEEPKPAMFKTFAMKPYDGSKDPKDYVEVFKGFIDFQAGSDAMKCRAFHIALIESTWLWYRRLSTRSIST

Query:  YSQLRKEFISQFSSRQYDQKTATHLATIRQKEDETLMEYVTKFQVE
        YSQLRKEFISQFSSR YD+KTATHLATIRQKE ETL EYVT+F  E
Subjt:  YSQLRKEFISQFSSRQYDQKTATHLATIRQKEDETLMEYVTKFQVE

TrEMBL top hitse value%identityAlignment
A0A6J1DDW5 uncharacterized protein LOC1110196341.1e-5173.29Show/hide
Query:  KVKALKARCQKKDNVFDDGEMGESPFTLDILEEPKPAMFKTFAMKPYDGSKDPKDYVEVFKGFIDFQAGSDAMKCRAFHIALIESTWLWYRRLSTRSIST
        +V+ALKA+C+KK++ FDDG++GESPFT DILE   P  FKT  MKPYDGSKDPKDYVEVF+G +DFQA +DA+KCR F IAL  S  LWYRRL  RSIST
Subjt:  KVKALKARCQKKDNVFDDGEMGESPFTLDILEEPKPAMFKTFAMKPYDGSKDPKDYVEVFKGFIDFQAGSDAMKCRAFHIALIESTWLWYRRLSTRSIST

Query:  YSQLRKEFISQFSSRQYDQKTATHLATIRQKEDETLMEYVTKFQVE
        YSQLRKEFI QFSSR YD+KTATHL TIRQKE ETL EYVT+FQ E
Subjt:  YSQLRKEFISQFSSRQYDQKTATHLATIRQKEDETLMEYVTKFQVE

A0A6J1DM55 uncharacterized protein LOC1110222679.5e-5171.92Show/hide
Query:  KVKALKARCQKKDNVFDDGEMGESPFTLDILEEPKPAMFKTFAMKPYDGSKDPKDYVEVFKGFIDFQAGSDAMKCRAFHIALIESTWLWYRRLSTRSIST
        +V+ALKA C+KK++ FDDG++GE PFTLDILE P    FKT  MKPYDGSK+PKDYV+VF+G ++FQA +DA+KCRAF IA   S  LWYRRL  RSIST
Subjt:  KVKALKARCQKKDNVFDDGEMGESPFTLDILEEPKPAMFKTFAMKPYDGSKDPKDYVEVFKGFIDFQAGSDAMKCRAFHIALIESTWLWYRRLSTRSIST

Query:  YSQLRKEFISQFSSRQYDQKTATHLATIRQKEDETLMEYVTKFQVE
        YSQLRKEFISQFSSR YD+KTATHLATIRQK+ ETL EYVT+FQ E
Subjt:  YSQLRKEFISQFSSRQYDQKTATHLATIRQKEDETLMEYVTKFQVE

A0A6J1DPN4 uncharacterized protein LOC1110230603.3e-5171.92Show/hide
Query:  KVKALKARCQKKDNVFDDGEMGESPFTLDILEEPKPAMFKTFAMKPYDGSKDPKDYVEVFKGFIDFQAGSDAMKCRAFHIALIESTWLWYRRLSTRSIST
        +V+ALK RC+KK++ FDDG++GESPFT DILE   P  FKT  MK YDGSKDPKDYVEVF+G +DFQA +DA+KCRAF IAL  S  LWYRRL  RSIST
Subjt:  KVKALKARCQKKDNVFDDGEMGESPFTLDILEEPKPAMFKTFAMKPYDGSKDPKDYVEVFKGFIDFQAGSDAMKCRAFHIALIESTWLWYRRLSTRSIST

Query:  YSQLRKEFISQFSSRQYDQKTATHLATIRQKEDETLMEYVTKFQVE
        YSQLRKEFISQF SR YD+KT THLATIRQKE +TL EY+T+FQ E
Subjt:  YSQLRKEFISQFSSRQYDQKTATHLATIRQKEDETLMEYVTKFQVE

A0A6J1DS95 uncharacterized protein LOC1110234211.1e-5166.67Show/hide
Query:  RADYSRREGDL-RKVKALKARCQKKDNVFDDGEMGESPFTLDILEEPKPAMFKTFAMKPYDGSKDPKDYVEVFKGFIDFQAGSDAMKCRAFHIALIESTW
        R ++ +  G+L  +V+ALKA+C++KD+  +DG++GESPFT D+LE P P  FK   +KPYDG+KDPKDYVEVF+G +DFQA SDA+KCRAF IAL  S  
Subjt:  RADYSRREGDL-RKVKALKARCQKKDNVFDDGEMGESPFTLDILEEPKPAMFKTFAMKPYDGSKDPKDYVEVFKGFIDFQAGSDAMKCRAFHIALIESTW

Query:  LWYRRLSTRSISTYSQLRKEFISQFSSRQYDQKTATHLATIRQKEDETLMEYVTKFQVE
        LWYRRL  RSISTYSQLR+EF++QFSSR YD+KTATHLATIRQKE ETL EYVT+FQ E
Subjt:  LWYRRLSTRSISTYSQLRKEFISQFSSRQYDQKTATHLATIRQKEDETLMEYVTKFQVE

A0A6J1DY58 uncharacterized protein LOC1110256633.1e-5476.03Show/hide
Query:  KVKALKARCQKKDNVFDDGEMGESPFTLDILEEPKPAMFKTFAMKPYDGSKDPKDYVEVFKGFIDFQAGSDAMKCRAFHIALIESTWLWYRRLSTRSIST
        +V+ALKARC+KK+  FDDG++GESPFT DILE P P  FKT  MKPYDGSKDPKDYVEVF+G +DFQA +DA+KCRAF IAL +S  LWYRRL  RSIST
Subjt:  KVKALKARCQKKDNVFDDGEMGESPFTLDILEEPKPAMFKTFAMKPYDGSKDPKDYVEVFKGFIDFQAGSDAMKCRAFHIALIESTWLWYRRLSTRSIST

Query:  YSQLRKEFISQFSSRQYDQKTATHLATIRQKEDETLMEYVTKFQVE
        YSQLRKEFISQFSSR YD+KTATHLATIRQKE ETL EYVT+F  E
Subjt:  YSQLRKEFISQFSSRQYDQKTATHLATIRQKEDETLMEYVTKFQVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATTCCACGCGAGGTTGATGCAAAGATTGCAGAAGATCACGGATAGGGAGGCCAAGGCAGCGAACAACCTCATAGCGTCGAAAAGGACTTCACGTAAGTCTACTCC
AGCAATGGATCCTAATTCTAAGGTCTCAAAGGACGAGGAGGACCAGCATCTCGGAGGGGAAACCAGAGATCCTCCTCTACACCTTGATCGTGATGATCAGTATCTCGATG
ATAATGAGAGAGCTGATTATAGTCGTCGAGAGGGTGACCTTAGAAAGGTTAAAGCTCTCAAGGCGAGGTGCCAGAAGAAAGATAATGTGTTTGATGATGGCGAGATGGGC
GAGTCGCCATTCACCTTGGACATTCTTGAGGAACCTAAACCTGCCATGTTCAAAACGTTTGCCATGAAACCCTACGATGGATCCAAGGATCCAAAAGATTATGTGGAGGT
CTTTAAAGGCTTCATAGACTTTCAGGCGGGTTCGGATGCTATGAAATGTCGAGCATTCCATATTGCTTTGATTGAGAGTACCTGGCTCTGGTATAGAAGGCTGTCGACCA
GGTCGATCTCGACCTACAGTCAGCTGAGAAAGGAGTTCATAAGTCAATTCTCTTCTCGACAGTATGACCAAAAGACAGCCACACATCTTGCCACCATTCGACAAAAGGAG
GATGAGACACTGATGGAGTACGTGACCAAGTTCCAAGTGGAAGTTGAAGGTCCTACTTCGACGACTCAGCCATGTGCTACTTTCTCTATGGCCTGGCCAATGAGACCTTG
A
mRNA sequenceShow/hide mRNA sequence
ATGGCATTCCACGCGAGGTTGATGCAAAGATTGCAGAAGATCACGGATAGGGAGGCCAAGGCAGCGAACAACCTCATAGCGTCGAAAAGGACTTCACGTAAGTCTACTCC
AGCAATGGATCCTAATTCTAAGGTCTCAAAGGACGAGGAGGACCAGCATCTCGGAGGGGAAACCAGAGATCCTCCTCTACACCTTGATCGTGATGATCAGTATCTCGATG
ATAATGAGAGAGCTGATTATAGTCGTCGAGAGGGTGACCTTAGAAAGGTTAAAGCTCTCAAGGCGAGGTGCCAGAAGAAAGATAATGTGTTTGATGATGGCGAGATGGGC
GAGTCGCCATTCACCTTGGACATTCTTGAGGAACCTAAACCTGCCATGTTCAAAACGTTTGCCATGAAACCCTACGATGGATCCAAGGATCCAAAAGATTATGTGGAGGT
CTTTAAAGGCTTCATAGACTTTCAGGCGGGTTCGGATGCTATGAAATGTCGAGCATTCCATATTGCTTTGATTGAGAGTACCTGGCTCTGGTATAGAAGGCTGTCGACCA
GGTCGATCTCGACCTACAGTCAGCTGAGAAAGGAGTTCATAAGTCAATTCTCTTCTCGACAGTATGACCAAAAGACAGCCACACATCTTGCCACCATTCGACAAAAGGAG
GATGAGACACTGATGGAGTACGTGACCAAGTTCCAAGTGGAAGTTGAAGGTCCTACTTCGACGACTCAGCCATGTGCTACTTTCTCTATGGCCTGGCCAATGAGACCTTG
A
Protein sequenceShow/hide protein sequence
MAFHARLMQRLQKITDREAKAANNLIASKRTSRKSTPAMDPNSKVSKDEEDQHLGGETRDPPLHLDRDDQYLDDNERADYSRREGDLRKVKALKARCQKKDNVFDDGEMG
ESPFTLDILEEPKPAMFKTFAMKPYDGSKDPKDYVEVFKGFIDFQAGSDAMKCRAFHIALIESTWLWYRRLSTRSISTYSQLRKEFISQFSSRQYDQKTATHLATIRQKE
DETLMEYVTKFQVEVEGPTSTTQPCATFSMAWPMRP