CuGenDBv2

Gene ID	Moc01g12930
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	SWIM-type domain-containing protein
Genome location	chr1:7861999..7862676
RNA-Seq Expression	Moc01g12930
Synteny	Moc01g12930
Gene Ontology terms	GO:0006360 - transcription by RNA polymerase I (biological process)
InterPro domains	IPR004332 - Transposase, MuDR, plant

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022143494.1 uncharacterized protein LOC111013371 [Momordica charantia]

1.3e-106

85.71

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Query:  MFTEIDFEIVDSICEESLKLEEGSMSVEMNVDNIRIGSKFRTREELQLTVKKYYIAQHYQLVVMESNQDMWYLKCKEWNDSCKWKLRTRRRKSHGMFEIS
        MFTEIDFE VDSICEE  KLEEGSMS+EM+VDNIRIGSKFRT+EELQL VKKY I QHYQ VV+ESNQDMWY+KCK+WND CKW+LR  RRKSHGMFEIS
Subjt:  MFTEIDFEIVDSICEESLKLEEGSMSVEMNVDNIRIGSKFRTREELQLTVKKYYIAQHYQLVVMESNQDMWYLKCKEWNDSCKWKLRTRRRKSHGMFEIS

Query:  VLEEVHSCLYAELTQDHSQLDSNFMCNEIQNIVRRDPSMSATSLQEVIKKDFGYCVNYRRMWQAKRKALIKVFEDWEKSYEELPYWLNALVHYNVDTRVL
        VLEEVHSCLY ELTQDHSQLDSNFMCNEIQNIVRRDPSMS  SLQEVIKKDFGYCVNYRRMWQAKRKALIKVF DWEKSYEELPY LNALVHYNVDTRVL
Subjt:  VLEEVHSCLYAELTQDHSQLDSNFMCNEIQNIVRRDPSMSATSLQEVIKKDFGYCVNYRRMWQAKRKALIKVFEDWEKSYEELPYWLNALVHYNVDTRVL

Query:  WDLIPSNKRGNLIFRAIVLVIWSY
        WDLIPSN  G+LIF     V WS+
Subjt:  WDLIPSNKRGNLIFRAIVLVIWSY

XP_022149421.1 uncharacterized protein LOC111017851 [Momordica charantia]

3.2e-121

96.43

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Query:  MFTEIDFEIVDSICEESLKLEEGSMSVEMNVDNIRIGSKFRTREELQLTVKKYYIAQHYQLVVMESNQDMWYLKCKEWNDSCKWKLRTRRRKSHGMFEIS
        MFTEIDFEIVDSICEESLKLEEGSMSVEMNVDNIRIGSKFRTREELQLTVKKYYIAQHYQLVVMESNQDMWYLKCKEWNDSCKWKLRTRRRKSHGMFEIS
Subjt:  MFTEIDFEIVDSICEESLKLEEGSMSVEMNVDNIRIGSKFRTREELQLTVKKYYIAQHYQLVVMESNQDMWYLKCKEWNDSCKWKLRTRRRKSHGMFEIS

Query:  VLEEVHSCLYAELTQDHSQLDSNFMCNEIQNIVRRDPSMSATSLQEVIKKDFGYCVNYRRMWQAKRKALIKVFEDWEKSYEELPYWLNALVHYNVDTRVL
        VLEEVHSCLYAELTQDHSQLDSNFMCNEIQNIVRRDPSMSATSLQEVIKKDFGYCVNYRRMWQAKRKALIKVFEDWEKSYEELPYWLNALVHYNVDTRVL
Subjt:  VLEEVHSCLYAELTQDHSQLDSNFMCNEIQNIVRRDPSMSATSLQEVIKKDFGYCVNYRRMWQAKRKALIKVFEDWEKSYEELPYWLNALVHYNVDTRVL

Query:  WDLIPSNKRGNLIFRAIVLVIWSY
        WDLIPSNKRGNLIF  +    WS+
Subjt:  WDLIPSNKRGNLIFRAIVLVIWSY

XP_022153141.1 uncharacterized protein LOC111020709 [Momordica charantia]

2.5e-102

83.04

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Query:  MFTEIDFEIVDSICEESLKLEEGSMSVEMNVDNIRIGSKFRTREELQLTVKKYYIAQHYQLVVMESNQDMWYLKCKEWNDSCKWKLRTRRRKSHGMFEIS
        MF EIDFEIVDSICEE  KLEEGSMS++MNVDNIRIGSKFRT+E+LQL VKKY I QHYQ VVMESNQDMWY+KCK+WND CKW+LR RR KSHGMFEIS
Subjt:  MFTEIDFEIVDSICEESLKLEEGSMSVEMNVDNIRIGSKFRTREELQLTVKKYYIAQHYQLVVMESNQDMWYLKCKEWNDSCKWKLRTRRRKSHGMFEIS

Query:  VLEEVHSCLYAELTQDHSQLDSNFMCNEIQNIVRRDPSMSATSLQEVIKKDFGYCVNYRRMWQAKRKALIKVFEDWEKSYEELPYWLNALVHYNVDTRVL
        VLEEVHS LYAELTQDHSQLDSNFM NEIQNIVR DPS   TSLQEVIKKDFGYCVNY+RMWQAKRK LIKVF DWEKSYEEL YWLNALVHYN DTRVL
Subjt:  VLEEVHSCLYAELTQDHSQLDSNFMCNEIQNIVRRDPSMSATSLQEVIKKDFGYCVNYRRMWQAKRKALIKVFEDWEKSYEELPYWLNALVHYNVDTRVL

Query:  WDLIPSNKRGNLIFRAIVLVIWSY
        WDLIPSNK  +LIF     V WS+
Subjt:  WDLIPSNKRGNLIFRAIVLVIWSY

XP_022154303.1 uncharacterized protein LOC111021598 [Momordica charantia]

1.3e-103

83.04

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Query:  MFTEIDFEIVDSICEESLKLEEGSMSVEMNVDNIRIGSKFRTREELQLTVKKYYIAQHYQLVVMESNQDMWYLKCKEWNDSCKWKLRTRRRKSHGMFEIS
        MFT+IDFEIV+SICEE   LEEGSMS+EMNVDNIR+ SKF+T+EELQL VKKY IAQHYQ VV +SNQDMWY+KCK+WND CKW L  RRRKSH MFEIS
Subjt:  MFTEIDFEIVDSICEESLKLEEGSMSVEMNVDNIRIGSKFRTREELQLTVKKYYIAQHYQLVVMESNQDMWYLKCKEWNDSCKWKLRTRRRKSHGMFEIS

Query:  VLEEVHSCLYAELTQDHSQLDSNFMCNEIQNIVRRDPSMSATSLQEVIKKDFGYCVNYRRMWQAKRKALIKVFEDWEKSYEELPYWLNALVHYNVDTRVL
        VLEEVHSCLYAELT DHSQLDSNFMCNEIQNIVRRDPS S  SLQEVIKKDFGYCVNYRRMWQAKRKALIKVF  WEKSYEELPYWLNALVHYN D RVL
Subjt:  VLEEVHSCLYAELTQDHSQLDSNFMCNEIQNIVRRDPSMSATSLQEVIKKDFGYCVNYRRMWQAKRKALIKVFEDWEKSYEELPYWLNALVHYNVDTRVL

Query:  WDLIPSNKRGNLIFRAIVLVIWSY
        WDLIPSNK GNLIF     V WS+
Subjt:  WDLIPSNKRGNLIFRAIVLVIWSY

XP_022157858.1 uncharacterized protein LOC111024473 [Momordica charantia]

1.2e-104

83.93

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Query:  MFTEIDFEIVDSICEESLKLEEGSMSVEMNVDNIRIGSKFRTREELQLTVKKYYIAQHYQLVVMESNQDMWYLKCKEWNDSCKWKLRTRRRKSHGMFEIS
        MFTEIDFE   SICEE  KLEEGSMS+EM+VDNIRI SKFRT+EELQL VKKY IAQHYQ VV+ESNQDMWY+KCK+WND CKW+LR RRRKSHGMFEIS
Subjt:  MFTEIDFEIVDSICEESLKLEEGSMSVEMNVDNIRIGSKFRTREELQLTVKKYYIAQHYQLVVMESNQDMWYLKCKEWNDSCKWKLRTRRRKSHGMFEIS

Query:  VLEEVHSCLYAELTQDHSQLDSNFMCNEIQNIVRRDPSMSATSLQEVIKKDFGYCVNYRRMWQAKRKALIKVFEDWEKSYEELPYWLNALVHYNVDTRVL
        VLEEVHSCLY ELTQDHSQLDSNFMC+EIQNIVRRDPS S  SLQEVIKK+FGYCVNYRRMWQAKRKALIKVF DWEKSYEEL YWLNALVHYNVDTRVL
Subjt:  VLEEVHSCLYAELTQDHSQLDSNFMCNEIQNIVRRDPSMSATSLQEVIKKDFGYCVNYRRMWQAKRKALIKVFEDWEKSYEELPYWLNALVHYNVDTRVL

Query:  WDLIPSNKRGNLIFRAIVLVIWSY
        WDLIPSN  G+LIF     V WS+
Subjt:  WDLIPSNKRGNLIFRAIVLVIWSY

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CPH0 uncharacterized protein LOC111013371

6.3e-107

85.71

Show/hide

Query:  MFTEIDFEIVDSICEESLKLEEGSMSVEMNVDNIRIGSKFRTREELQLTVKKYYIAQHYQLVVMESNQDMWYLKCKEWNDSCKWKLRTRRRKSHGMFEIS
        MFTEIDFE VDSICEE  KLEEGSMS+EM+VDNIRIGSKFRT+EELQL VKKY I QHYQ VV+ESNQDMWY+KCK+WND CKW+LR  RRKSHGMFEIS
Subjt:  MFTEIDFEIVDSICEESLKLEEGSMSVEMNVDNIRIGSKFRTREELQLTVKKYYIAQHYQLVVMESNQDMWYLKCKEWNDSCKWKLRTRRRKSHGMFEIS

Query:  VLEEVHSCLYAELTQDHSQLDSNFMCNEIQNIVRRDPSMSATSLQEVIKKDFGYCVNYRRMWQAKRKALIKVFEDWEKSYEELPYWLNALVHYNVDTRVL
        VLEEVHSCLY ELTQDHSQLDSNFMCNEIQNIVRRDPSMS  SLQEVIKKDFGYCVNYRRMWQAKRKALIKVF DWEKSYEELPY LNALVHYNVDTRVL
Subjt:  VLEEVHSCLYAELTQDHSQLDSNFMCNEIQNIVRRDPSMSATSLQEVIKKDFGYCVNYRRMWQAKRKALIKVFEDWEKSYEELPYWLNALVHYNVDTRVL

Query:  WDLIPSNKRGNLIFRAIVLVIWSY
        WDLIPSN  G+LIF     V WS+
Subjt:  WDLIPSNKRGNLIFRAIVLVIWSY

A0A6J1D8B4 uncharacterized protein LOC111017851

1.5e-121

96.43

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Query:  MFTEIDFEIVDSICEESLKLEEGSMSVEMNVDNIRIGSKFRTREELQLTVKKYYIAQHYQLVVMESNQDMWYLKCKEWNDSCKWKLRTRRRKSHGMFEIS
        MFTEIDFEIVDSICEESLKLEEGSMSVEMNVDNIRIGSKFRTREELQLTVKKYYIAQHYQLVVMESNQDMWYLKCKEWNDSCKWKLRTRRRKSHGMFEIS
Subjt:  MFTEIDFEIVDSICEESLKLEEGSMSVEMNVDNIRIGSKFRTREELQLTVKKYYIAQHYQLVVMESNQDMWYLKCKEWNDSCKWKLRTRRRKSHGMFEIS

Query:  VLEEVHSCLYAELTQDHSQLDSNFMCNEIQNIVRRDPSMSATSLQEVIKKDFGYCVNYRRMWQAKRKALIKVFEDWEKSYEELPYWLNALVHYNVDTRVL
        VLEEVHSCLYAELTQDHSQLDSNFMCNEIQNIVRRDPSMSATSLQEVIKKDFGYCVNYRRMWQAKRKALIKVFEDWEKSYEELPYWLNALVHYNVDTRVL
Subjt:  VLEEVHSCLYAELTQDHSQLDSNFMCNEIQNIVRRDPSMSATSLQEVIKKDFGYCVNYRRMWQAKRKALIKVFEDWEKSYEELPYWLNALVHYNVDTRVL

Query:  WDLIPSNKRGNLIFRAIVLVIWSY
        WDLIPSNKRGNLIF  +    WS+
Subjt:  WDLIPSNKRGNLIFRAIVLVIWSY

A0A6J1DJS7 uncharacterized protein LOC111020709

1.2e-102

83.04

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Query:  MFTEIDFEIVDSICEESLKLEEGSMSVEMNVDNIRIGSKFRTREELQLTVKKYYIAQHYQLVVMESNQDMWYLKCKEWNDSCKWKLRTRRRKSHGMFEIS
        MF EIDFEIVDSICEE  KLEEGSMS++MNVDNIRIGSKFRT+E+LQL VKKY I QHYQ VVMESNQDMWY+KCK+WND CKW+LR RR KSHGMFEIS
Subjt:  MFTEIDFEIVDSICEESLKLEEGSMSVEMNVDNIRIGSKFRTREELQLTVKKYYIAQHYQLVVMESNQDMWYLKCKEWNDSCKWKLRTRRRKSHGMFEIS

Query:  VLEEVHSCLYAELTQDHSQLDSNFMCNEIQNIVRRDPSMSATSLQEVIKKDFGYCVNYRRMWQAKRKALIKVFEDWEKSYEELPYWLNALVHYNVDTRVL
        VLEEVHS LYAELTQDHSQLDSNFM NEIQNIVR DPS   TSLQEVIKKDFGYCVNY+RMWQAKRK LIKVF DWEKSYEEL YWLNALVHYN DTRVL
Subjt:  VLEEVHSCLYAELTQDHSQLDSNFMCNEIQNIVRRDPSMSATSLQEVIKKDFGYCVNYRRMWQAKRKALIKVFEDWEKSYEELPYWLNALVHYNVDTRVL

Query:  WDLIPSNKRGNLIFRAIVLVIWSY
        WDLIPSNK  +LIF     V WS+
Subjt:  WDLIPSNKRGNLIFRAIVLVIWSY

A0A6J1DJZ1 uncharacterized protein LOC111021598

6.5e-104

83.04

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Query:  MFTEIDFEIVDSICEESLKLEEGSMSVEMNVDNIRIGSKFRTREELQLTVKKYYIAQHYQLVVMESNQDMWYLKCKEWNDSCKWKLRTRRRKSHGMFEIS
        MFT+IDFEIV+SICEE   LEEGSMS+EMNVDNIR+ SKF+T+EELQL VKKY IAQHYQ VV +SNQDMWY+KCK+WND CKW L  RRRKSH MFEIS
Subjt:  MFTEIDFEIVDSICEESLKLEEGSMSVEMNVDNIRIGSKFRTREELQLTVKKYYIAQHYQLVVMESNQDMWYLKCKEWNDSCKWKLRTRRRKSHGMFEIS

Query:  VLEEVHSCLYAELTQDHSQLDSNFMCNEIQNIVRRDPSMSATSLQEVIKKDFGYCVNYRRMWQAKRKALIKVFEDWEKSYEELPYWLNALVHYNVDTRVL
        VLEEVHSCLYAELT DHSQLDSNFMCNEIQNIVRRDPS S  SLQEVIKKDFGYCVNYRRMWQAKRKALIKVF  WEKSYEELPYWLNALVHYN D RVL
Subjt:  VLEEVHSCLYAELTQDHSQLDSNFMCNEIQNIVRRDPSMSATSLQEVIKKDFGYCVNYRRMWQAKRKALIKVFEDWEKSYEELPYWLNALVHYNVDTRVL

Query:  WDLIPSNKRGNLIFRAIVLVIWSY
        WDLIPSNK GNLIF     V WS+
Subjt:  WDLIPSNKRGNLIFRAIVLVIWSY

A0A6J1DUI1 uncharacterized protein LOC111024473

5.9e-105

83.93

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Query:  MFTEIDFEIVDSICEESLKLEEGSMSVEMNVDNIRIGSKFRTREELQLTVKKYYIAQHYQLVVMESNQDMWYLKCKEWNDSCKWKLRTRRRKSHGMFEIS
        MFTEIDFE   SICEE  KLEEGSMS+EM+VDNIRI SKFRT+EELQL VKKY IAQHYQ VV+ESNQDMWY+KCK+WND CKW+LR RRRKSHGMFEIS
Subjt:  MFTEIDFEIVDSICEESLKLEEGSMSVEMNVDNIRIGSKFRTREELQLTVKKYYIAQHYQLVVMESNQDMWYLKCKEWNDSCKWKLRTRRRKSHGMFEIS

Query:  VLEEVHSCLYAELTQDHSQLDSNFMCNEIQNIVRRDPSMSATSLQEVIKKDFGYCVNYRRMWQAKRKALIKVFEDWEKSYEELPYWLNALVHYNVDTRVL
        VLEEVHSCLY ELTQDHSQLDSNFMC+EIQNIVRRDPS S  SLQEVIKK+FGYCVNYRRMWQAKRKALIKVF DWEKSYEEL YWLNALVHYNVDTRVL
Subjt:  VLEEVHSCLYAELTQDHSQLDSNFMCNEIQNIVRRDPSMSATSLQEVIKKDFGYCVNYRRMWQAKRKALIKVFEDWEKSYEELPYWLNALVHYNVDTRVL

Query:  WDLIPSNKRGNLIFRAIVLVIWSY
        WDLIPSN  G+LIF     V WS+
Subjt:  WDLIPSNKRGNLIFRAIVLVIWSY

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G64255.1 MuDR family transposase

3.5e-17

30.2

Show/hide

Query:  SVEMNVDNIRIGSKFRTREELQLTVKKYYIAQHYQLVVMESNQDMWYLKCKEWNDSCKWKLRTRRRKSHGMFEISVLEEVHSCLYAELTQDHSQLDSNFM
        S+ ++  ++R+G  F+  +EL+  V    +    + VV E+ +D +  +C  W   CKW L   R K HG+ EI      H+C +  + +D     S F 
Subjt:  SVEMNVDNIRIGSKFRTREELQLTVKKYYIAQHYQLVVMESNQDMWYLKCKEWNDSCKWKLRTRRRKSHGMFEISVLEEVHSCLYAELTQDHSQLDSNFM

Query:  CNEIQNIVRRDPSMSATSLQEVIKKDFGYCVNYRRMWQAKRKALIKVFEDWEKSYEELPYWLNALVHYN---VDTRVLWDLIPSNKRGNLIFRAIVLVIW
         +EI+  VR  P+ + + L++  KK  GY +    +  AK KA+ +VF DW++S+E+ P  ++AL   N   VD +  +DL P     N  F +   V W
Subjt:  CNEIQNIVRRDPSMSATSLQEVIKKDFGYCVNYRRMWQAKRKALIKVFEDWEKSYEELPYWLNALVHYN---VDTRVLWDLIPSNKRGNLIFRAIVLVIW

Query:  SY
        ++
Subjt:  SY

AT1G64260.1 MuDR family transposase

6.0e-17

28.21

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Query:  NIRIGSKFRTREELQLTVKKYYIAQHYQLVVMESNQDMWYLKCKEWNDSCKWKLRTRRRKSHGMFEISVLEEVHSCLYAELTQDHSQLDSNFMCNEIQNI
        ++ +G  F+ R+EL+  V  + I +    +V E+ ++M+  +C  W   CKW LR  R + HG+ EI+     H+C +    +  +  +S F  +EI+ +
Subjt:  NIRIGSKFRTREELQLTVKKYYIAQHYQLVVMESNQDMWYLKCKEWNDSCKWKLRTRRRKSHGMFEISVLEEVHSCLYAELTQDHSQLDSNFMCNEIQNI

Query:  VRRDPSMSATSLQEVIKKDFGYCVNYRRMWQAKRKALIKVFEDWEKSYEELPYWLNALVHYNVDTRVLW--DLIPSNKRGNLIFRAIVLVIWSYN
        VR  P++S   L++  K+  GY +   +M   K + + +VF D ++S+  +P  ++A  H +    V W  DL P     N  F +   V WS++
Subjt:  VRRDPSMSATSLQEVIKKDFGYCVNYRRMWQAKRKALIKVFEDWEKSYEELPYWLNALVHYNVDTRVLW--DLIPSNKRGNLIFRAIVLVIWSYN

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTTTACTGAAATAGATTTTGAGATTGTAGACTCTATATGTGAAGAAAGTTTAAAGTTGGAAGAAGGGTCAATGTCTGTAGAAATGAATGTGGATAACATACGTATAGG
GTCAAAATTTAGGACCAGAGAAGAATTACAACTTACTGTCAAGAAATATTATATTGCACAACATTATCAATTGGTTGTAATGGAATCAAATCAAGATATGTGGTATCTAA
AATGCAAAGAGTGGAATGATAGTTGCAAGTGGAAACTTCGCACTCGTCGACGTAAATCTCATGGGATGTTTGAAATTAGTGTACTTGAGGAGGTTCATTCGTGCTTATAT
GCTGAGCTTACACAAGATCACTCACAATTGGACTCAAATTTTATGTGCAATGAAATTCAGAATATTGTACGACGTGATCCTAGTATGTCTGCAACTTCATTACAAGAAGT
CATAAAAAAAGATTTTGGATATTGTGTGAACTATAGACGTATGTGGCAAGCTAAACGAAAAGCACTAATTAAAGTTTTTGAAGATTGGGAAAAATCTTATGAAGAGCTCC
CATACTGGTTGAATGCTTTGGTGCATTACAATGTCGACACTCGAGTACTCTGGGACTTGATACCTTCGAATAAACGTGGAAATCTTATTTTTCGGGCGATTGTTTTGGTC
ATTTGGTCCTACAATTGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MFTEIDFEIVDSICEESLKLEEGSMSVEMNVDNIRIGSKFRTREELQLTVKKYYIAQHYQLVVMESNQDMWYLKCKEWNDSCKWKLRTRRRKSHGMFEISVLEEVHSCLY
AELTQDHSQLDSNFMCNEIQNIVRRDPSMSATSLQEVIKKDFGYCVNYRRMWQAKRKALIKVFEDWEKSYEELPYWLNALVHYNVDTRVLWDLIPSNKRGNLIFRAIVLV
IWSYN

Moc01g12930 (gene) of Bitter gourd (OHB3-1) v2 genome