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Moc01g13280 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g13280
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr1:8108139..8112739
RNA-Seq ExpressionMoc01g13280
SyntenyMoc01g13280
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]2.7e-5650.38Show/hide
Query:  RDAYDRWIKDNDKAKVYILTRISDMLAKNHESMVTAREIIDSLQDMFGEPSIQARHDALKFIYNPHERG---------------NINAITCSELDE----
        R+ Y+RW K N+KA+ YIL  +S++LAK HESM+TAREI+DSLQ+MFG+ S Q +HDALK+IYN                    N+  +  + +DE    
Subjt:  RDAYDRWIKDNDKAKVYILTRISDMLAKNHESMVTAREIIDSLQDMFGEPSIQARHDALKFIYNPHERG---------------NINAITCSELDE----

Query:  ------------------------YNLTTLLNEVQNFQSLIKNKGQEGEANVVTS-KWFHRDSASITKFVLSSSGSMTFKKKKNSGKGHTIDPITAAAAK
                                Y LTTLLNE+Q F+SL+K KGQ+GEANV TS + FHR S S TK + SSSG+  +KKKK  G+G+  +    AAAK
Subjt:  ------------------------YNLTTLLNEVQNFQSLIKNKGQEGEANVVTS-KWFHRDSASITKFVLSSSGSMTFKKKKNSGKGHTIDPITAAAAK

Query:  KVKAKVADKGKCFHCNVDEHWKRNCSKYLAKKKKAKEGKYDVLVFESSLVENDDSAWILDSG
          K   A KG CFHCN + HWKRNC KYLA+KKKAK+GKYD+LV E+ LVENDDSAWI+DSG
Subjt:  KVKAKVADKGKCFHCNVDEHWKRNCSKYLAKKKKAKEGKYDVLVFESSLVENDDSAWILDSG

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]2.7e-5650.38Show/hide
Query:  RDAYDRWIKDNDKAKVYILTRISDMLAKNHESMVTAREIIDSLQDMFGEPSIQARHDALKFIYNPHERG---------------NINAITCSELDE----
        R+ Y+RW K N+KA+ YIL  +S++LAK HESM+TAREI+DSLQ+MFG+ S Q +HDALK+IYN                    N+  +  + +DE    
Subjt:  RDAYDRWIKDNDKAKVYILTRISDMLAKNHESMVTAREIIDSLQDMFGEPSIQARHDALKFIYNPHERG---------------NINAITCSELDE----

Query:  ------------------------YNLTTLLNEVQNFQSLIKNKGQEGEANVVTS-KWFHRDSASITKFVLSSSGSMTFKKKKNSGKGHTIDPITAAAAK
                                Y LTTLLNE+Q F+SL+K KGQ+GEANV TS + FHR S S TK + SSSG+  +KKKK  G+G+  +    AAAK
Subjt:  ------------------------YNLTTLLNEVQNFQSLIKNKGQEGEANVVTS-KWFHRDSASITKFVLSSSGSMTFKKKKNSGKGHTIDPITAAAAK

Query:  KVKAKVADKGKCFHCNVDEHWKRNCSKYLAKKKKAKEGKYDVLVFESSLVENDDSAWILDSG
          K   A KG CFHCN + HWKRNC KYLA+KKKAK+GKYD+LV E+ LVENDDSAWI+DSG
Subjt:  KVKAKVADKGKCFHCNVDEHWKRNCSKYLAKKKKAKEGKYDVLVFESSLVENDDSAWILDSG

KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]2.7e-5650.38Show/hide
Query:  RDAYDRWIKDNDKAKVYILTRISDMLAKNHESMVTAREIIDSLQDMFGEPSIQARHDALKFIYNPHERG---------------NINAITCSELDE----
        R+ Y+RW K N+KA+ YIL  +S++LAK HESM+TAREI+DSLQ+MFG+ S Q +HDALK+IYN                    N+  +  + +DE    
Subjt:  RDAYDRWIKDNDKAKVYILTRISDMLAKNHESMVTAREIIDSLQDMFGEPSIQARHDALKFIYNPHERG---------------NINAITCSELDE----

Query:  ------------------------YNLTTLLNEVQNFQSLIKNKGQEGEANVVTS-KWFHRDSASITKFVLSSSGSMTFKKKKNSGKGHTIDPITAAAAK
                                Y LTTLLNE+Q F+SL+K KGQ+GEANV TS + FHR S S TK + SSSG+  +KKKK  G+G+  +    AAAK
Subjt:  ------------------------YNLTTLLNEVQNFQSLIKNKGQEGEANVVTS-KWFHRDSASITKFVLSSSGSMTFKKKKNSGKGHTIDPITAAAAK

Query:  KVKAKVADKGKCFHCNVDEHWKRNCSKYLAKKKKAKEGKYDVLVFESSLVENDDSAWILDSG
          K   A KG CFHCN + HWKRNC KYLA+KKKAK+GKYD+LV E+ LVENDDSAWI+DSG
Subjt:  KVKAKVADKGKCFHCNVDEHWKRNCSKYLAKKKKAKEGKYDVLVFESSLVENDDSAWILDSG

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]2.7e-5650.38Show/hide
Query:  RDAYDRWIKDNDKAKVYILTRISDMLAKNHESMVTAREIIDSLQDMFGEPSIQARHDALKFIYNPHERG---------------NINAITCSELDE----
        R+ Y+RW K N+KA+ YIL  +S++LAK HESM+TAREI+DSLQ+MFG+ S Q +HDALK+IYN                    N+  +  + +DE    
Subjt:  RDAYDRWIKDNDKAKVYILTRISDMLAKNHESMVTAREIIDSLQDMFGEPSIQARHDALKFIYNPHERG---------------NINAITCSELDE----

Query:  ------------------------YNLTTLLNEVQNFQSLIKNKGQEGEANVVTS-KWFHRDSASITKFVLSSSGSMTFKKKKNSGKGHTIDPITAAAAK
                                Y LTTLLNE+Q F+SL+K KGQ+GEANV TS + FHR S S TK + SSSG+  +KKKK  G+G+  +    AAAK
Subjt:  ------------------------YNLTTLLNEVQNFQSLIKNKGQEGEANVVTS-KWFHRDSASITKFVLSSSGSMTFKKKKNSGKGHTIDPITAAAAK

Query:  KVKAKVADKGKCFHCNVDEHWKRNCSKYLAKKKKAKEGKYDVLVFESSLVENDDSAWILDSG
          K   A KG CFHCN + HWKRNC KYLA+KKKAK+GKYD+LV E+ LVENDDSAWI+DSG
Subjt:  KVKAKVADKGKCFHCNVDEHWKRNCSKYLAKKKKAKEGKYDVLVFESSLVENDDSAWILDSG

TYK26319.1 gag/pol protein [Cucumis melo var. makuwa]1.6e-5650.38Show/hide
Query:  RDAYDRWIKDNDKAKVYILTRISDMLAKNHESMVTAREIIDSLQDMFGEPSIQARHDALKFIYNPHERG---------------NINAITCSELDE----
        R+ Y+RW K N+KA+ YIL  +S++LAK HESM+TAREI+DSLQ+MFG+ S Q +HDALK+IYN                    N+  +  + +DE    
Subjt:  RDAYDRWIKDNDKAKVYILTRISDMLAKNHESMVTAREIIDSLQDMFGEPSIQARHDALKFIYNPHERG---------------NINAITCSELDE----

Query:  ------------------------YNLTTLLNEVQNFQSLIKNKGQEGEANVVTS-KWFHRDSASITKFVLSSSGSMTFKKKKNSGKGHTIDPITAAAAK
                                Y LTTLLNE+Q F+SL+K KGQ+GEANV TS + FHR S S TK + SSSG+  +KKKK  G+G+  +    AAAK
Subjt:  ------------------------YNLTTLLNEVQNFQSLIKNKGQEGEANVVTS-KWFHRDSASITKFVLSSSGSMTFKKKKNSGKGHTIDPITAAAAK

Query:  KVKAKVADKGKCFHCNVDEHWKRNCSKYLAKKKKAKEGKYDVLVFESSLVENDDSAWILDSG
          K   A KG CFHCN + HWKRNC KYLA+KKKAK+GKYD+LV E+ LVENDDSAWI+DSG
Subjt:  KVKAKVADKGKCFHCNVDEHWKRNCSKYLAKKKKAKEGKYDVLVFESSLVENDDSAWILDSG

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein1.3e-5650.38Show/hide
Query:  RDAYDRWIKDNDKAKVYILTRISDMLAKNHESMVTAREIIDSLQDMFGEPSIQARHDALKFIYNPHERG---------------NINAITCSELDE----
        R+ Y+RW K N+KA+ YIL  +S++LAK HESM+TAREI+DSLQ+MFG+ S Q +HDALK+IYN                    N+  +  + +DE    
Subjt:  RDAYDRWIKDNDKAKVYILTRISDMLAKNHESMVTAREIIDSLQDMFGEPSIQARHDALKFIYNPHERG---------------NINAITCSELDE----

Query:  ------------------------YNLTTLLNEVQNFQSLIKNKGQEGEANVVTS-KWFHRDSASITKFVLSSSGSMTFKKKKNSGKGHTIDPITAAAAK
                                Y LTTLLNE+Q F+SL+K KGQ+GEANV TS + FHR S S TK + SSSG+  +KKKK  G+G+  +    AAAK
Subjt:  ------------------------YNLTTLLNEVQNFQSLIKNKGQEGEANVVTS-KWFHRDSASITKFVLSSSGSMTFKKKKNSGKGHTIDPITAAAAK

Query:  KVKAKVADKGKCFHCNVDEHWKRNCSKYLAKKKKAKEGKYDVLVFESSLVENDDSAWILDSG
          K   A KG CFHCN + HWKRNC KYLA+KKKAK+GKYD+LV E+ LVENDDSAWI+DSG
Subjt:  KVKAKVADKGKCFHCNVDEHWKRNCSKYLAKKKKAKEGKYDVLVFESSLVENDDSAWILDSG

A0A5A7TU93 Gag/pol protein1.3e-5650.38Show/hide
Query:  RDAYDRWIKDNDKAKVYILTRISDMLAKNHESMVTAREIIDSLQDMFGEPSIQARHDALKFIYNPHERG---------------NINAITCSELDE----
        R+ Y+RW K N+KA+ YIL  +S++LAK HESM+TAREI+DSLQ+MFG+ S Q +HDALK+IYN                    N+  +  + +DE    
Subjt:  RDAYDRWIKDNDKAKVYILTRISDMLAKNHESMVTAREIIDSLQDMFGEPSIQARHDALKFIYNPHERG---------------NINAITCSELDE----

Query:  ------------------------YNLTTLLNEVQNFQSLIKNKGQEGEANVVTS-KWFHRDSASITKFVLSSSGSMTFKKKKNSGKGHTIDPITAAAAK
                                Y LTTLLNE+Q F+SL+K KGQ+GEANV TS + FHR S S TK + SSSG+  +KKKK  G+G+  +    AAAK
Subjt:  ------------------------YNLTTLLNEVQNFQSLIKNKGQEGEANVVTS-KWFHRDSASITKFVLSSSGSMTFKKKKNSGKGHTIDPITAAAAK

Query:  KVKAKVADKGKCFHCNVDEHWKRNCSKYLAKKKKAKEGKYDVLVFESSLVENDDSAWILDSG
          K   A KG CFHCN + HWKRNC KYLA+KKKAK+GKYD+LV E+ LVENDDSAWI+DSG
Subjt:  KVKAKVADKGKCFHCNVDEHWKRNCSKYLAKKKKAKEGKYDVLVFESSLVENDDSAWILDSG

A0A5A7V4M1 Gag/pol protein1.3e-5650.38Show/hide
Query:  RDAYDRWIKDNDKAKVYILTRISDMLAKNHESMVTAREIIDSLQDMFGEPSIQARHDALKFIYNPHERG---------------NINAITCSELDE----
        R+ Y+RW K N+KA+ YIL  +S++LAK HESM+TAREI+DSLQ+MFG+ S Q +HDALK+IYN                    N+  +  + +DE    
Subjt:  RDAYDRWIKDNDKAKVYILTRISDMLAKNHESMVTAREIIDSLQDMFGEPSIQARHDALKFIYNPHERG---------------NINAITCSELDE----

Query:  ------------------------YNLTTLLNEVQNFQSLIKNKGQEGEANVVTS-KWFHRDSASITKFVLSSSGSMTFKKKKNSGKGHTIDPITAAAAK
                                Y LTTLLNE+Q F+SL+K KGQ+GEANV TS + FHR S S TK + SSSG+  +KKKK  G+G+  +    AAAK
Subjt:  ------------------------YNLTTLLNEVQNFQSLIKNKGQEGEANVVTS-KWFHRDSASITKFVLSSSGSMTFKKKKNSGKGHTIDPITAAAAK

Query:  KVKAKVADKGKCFHCNVDEHWKRNCSKYLAKKKKAKEGKYDVLVFESSLVENDDSAWILDSG
          K   A KG CFHCN + HWKRNC KYLA+KKKAK+GKYD+LV E+ LVENDDSAWI+DSG
Subjt:  KVKAKVADKGKCFHCNVDEHWKRNCSKYLAKKKKAKEGKYDVLVFESSLVENDDSAWILDSG

A0A5D3CPJ6 Gag/pol protein1.3e-5650.38Show/hide
Query:  RDAYDRWIKDNDKAKVYILTRISDMLAKNHESMVTAREIIDSLQDMFGEPSIQARHDALKFIYNPHERG---------------NINAITCSELDE----
        R+ Y+RW K N+KA+ YIL  +S++LAK HESM+TAREI+DSLQ+MFG+ S Q +HDALK+IYN                    N+  +  + +DE    
Subjt:  RDAYDRWIKDNDKAKVYILTRISDMLAKNHESMVTAREIIDSLQDMFGEPSIQARHDALKFIYNPHERG---------------NINAITCSELDE----

Query:  ------------------------YNLTTLLNEVQNFQSLIKNKGQEGEANVVTS-KWFHRDSASITKFVLSSSGSMTFKKKKNSGKGHTIDPITAAAAK
                                Y LTTLLNE+Q F+SL+K KGQ+GEANV TS + FHR S S TK + SSSG+  +KKKK  G+G+  +    AAAK
Subjt:  ------------------------YNLTTLLNEVQNFQSLIKNKGQEGEANVVTS-KWFHRDSASITKFVLSSSGSMTFKKKKNSGKGHTIDPITAAAAK

Query:  KVKAKVADKGKCFHCNVDEHWKRNCSKYLAKKKKAKEGKYDVLVFESSLVENDDSAWILDSG
          K   A KG CFHCN + HWKRNC KYLA+KKKAK+GKYD+LV E+ LVENDDSAWI+DSG
Subjt:  KVKAKVADKGKCFHCNVDEHWKRNCSKYLAKKKKAKEGKYDVLVFESSLVENDDSAWILDSG

A0A5D3DS88 Gag/pol protein7.6e-5750.38Show/hide
Query:  RDAYDRWIKDNDKAKVYILTRISDMLAKNHESMVTAREIIDSLQDMFGEPSIQARHDALKFIYNPHERG---------------NINAITCSELDE----
        R+ Y+RW K N+KA+ YIL  +S++LAK HESM+TAREI+DSLQ+MFG+ S Q +HDALK+IYN                    N+  +  + +DE    
Subjt:  RDAYDRWIKDNDKAKVYILTRISDMLAKNHESMVTAREIIDSLQDMFGEPSIQARHDALKFIYNPHERG---------------NINAITCSELDE----

Query:  ------------------------YNLTTLLNEVQNFQSLIKNKGQEGEANVVTS-KWFHRDSASITKFVLSSSGSMTFKKKKNSGKGHTIDPITAAAAK
                                Y LTTLLNE+Q F+SL+K KGQ+GEANV TS + FHR S S TK + SSSG+  +KKKK  G+G+  +    AAAK
Subjt:  ------------------------YNLTTLLNEVQNFQSLIKNKGQEGEANVVTS-KWFHRDSASITKFVLSSSGSMTFKKKKNSGKGHTIDPITAAAAK

Query:  KVKAKVADKGKCFHCNVDEHWKRNCSKYLAKKKKAKEGKYDVLVFESSLVENDDSAWILDSG
          K   A KG CFHCN + HWKRNC KYLA+KKKAK+GKYD+LV E+ LVENDDSAWI+DSG
Subjt:  KVKAKVADKGKCFHCNVDEHWKRNCSKYLAKKKKAKEGKYDVLVFESSLVENDDSAWILDSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAATCCCGGAGCAAAAGCAGATCTTCGTTGCTGATTTTCGGGATACAAAACCGAAACTGAAAGAAGGAAAATACAGAGGAAACTTTACCTTTGAAGAACGTTTCTT
CAACGAGTTTCACTCGAACACCACCACTATCCTCTTGGGTCTCGGGATCGTGCTGCCCAAAGCCAGTCGGGATGCCTATGACAGATGGATCAAGGACAATGACAAGGCCA
AGGTCTATATCTTGACAAGAATATCTGATATGCTGGCTAAGAATCATGAGAGCATGGTCACCGCAAGGGAGATCATTGACTCATTGCAAGACATGTTTGGAGAACCGTCC
ATTCAAGCTCGACACGATGCCTTAAAGTTCATTTACAACCCACATGAAAGAGGGAACATCAATGCGATAACATGTTCTGAACTTGATGAGTACAACCTTACCACGCTCTT
AAATGAGGTACAAAATTTTCAGTCTCTTATTAAAAATAAGGGTCAGGAAGGGGAGGCAAACGTTGTCACCTCAAAATGGTTCCATCGAGATTCCGCCTCAATAACCAAAT
TTGTACTTTCTTCTTCTGGAAGTATGACTTTCAAGAAGAAGAAGAACAGTGGTAAGGGGCATACAATTGACCCCATTACTGCTGCTGCTGCTAAGAAGGTCAAGGCCAAA
GTTGCAGACAAAGGAAAATGTTTCCACTGCAATGTGGATGAGCACTGGAAACGAAATTGCTCGAAATACTTGGCCAAAAAGAAGAAAGCCAAAGAAGGGAAATATGATGT
ACTTGTTTTTGAATCTAGCTTAGTGGAGAATGATGATTCCGCCTGGATATTGGATTCAGGGCCACTAATCATGTTTGTTTTTCTTTCAGGAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAATCCCGGAGCAAAAGCAGATCTTCGTTGCTGATTTTCGGGATACAAAACCGAAACTGAAAGAAGGAAAATACAGAGGAAACTTTACCTTTGAAGAACGTTTCTT
CAACGAGTTTCACTCGAACACCACCACTATCCTCTTGGGTCTCGGGATCGTGCTGCCCAAAGCCAGTCGGGATGCCTATGACAGATGGATCAAGGACAATGACAAGGCCA
AGGTCTATATCTTGACAAGAATATCTGATATGCTGGCTAAGAATCATGAGAGCATGGTCACCGCAAGGGAGATCATTGACTCATTGCAAGACATGTTTGGAGAACCGTCC
ATTCAAGCTCGACACGATGCCTTAAAGTTCATTTACAACCCACATGAAAGAGGGAACATCAATGCGATAACATGTTCTGAACTTGATGAGTACAACCTTACCACGCTCTT
AAATGAGGTACAAAATTTTCAGTCTCTTATTAAAAATAAGGGTCAGGAAGGGGAGGCAAACGTTGTCACCTCAAAATGGTTCCATCGAGATTCCGCCTCAATAACCAAAT
TTGTACTTTCTTCTTCTGGAAGTATGACTTTCAAGAAGAAGAAGAACAGTGGTAAGGGGCATACAATTGACCCCATTACTGCTGCTGCTGCTAAGAAGGTCAAGGCCAAA
GTTGCAGACAAAGGAAAATGTTTCCACTGCAATGTGGATGAGCACTGGAAACGAAATTGCTCGAAATACTTGGCCAAAAAGAAGAAAGCCAAAGAAGGGAAATATGATGT
ACTTGTTTTTGAATCTAGCTTAGTGGAGAATGATGATTCCGCCTGGATATTGGATTCAGGGCCACTAATCATGTTTGTTTTTCTTTCAGGAAATTAG
Protein sequenceShow/hide protein sequence
MRIPEQKQIFVADFRDTKPKLKEGKYRGNFTFEERFFNEFHSNTTTILLGLGIVLPKASRDAYDRWIKDNDKAKVYILTRISDMLAKNHESMVTAREIIDSLQDMFGEPS
IQARHDALKFIYNPHERGNINAITCSELDEYNLTTLLNEVQNFQSLIKNKGQEGEANVVTSKWFHRDSASITKFVLSSSGSMTFKKKKNSGKGHTIDPITAAAAKKVKAK
VADKGKCFHCNVDEHWKRNCSKYLAKKKKAKEGKYDVLVFESSLVENDDSAWILDSGPLIMFVFLSGN