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Moc01g13440 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g13440
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr1:8223799..8225337
RNA-Seq ExpressionMoc01g13440
SyntenyMoc01g13440
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN78986.1 hypothetical protein VITISV_015274 [Vitis vinifera]1.6e-1835.27Show/hide
Query:  KFDGANFEYWKMQIKDYLTCKKLN-KALKERPVGMKDEDWVETNEQAVASIRLCLSMNVASLVANEMTIIDLMKALE------------------NSWET
        KFDG +F YW+MQI+DYL  +KL+   L  +P  MK E+W   + Q +  IRL LS +VA  V  E T  DLMKAL                   NSWE 
Subjt:  KFDGANFEYWKMQIKDYLTCKKLN-KALKERPVGMKDEDWVETNEQAVASIRLCLSMNVASLVANEMTIIDLMKALE------------------NSWET

Query:  MKTTVSNSLGDKSLKFSEICDAAFAEEIRRKGSGKESTFVQSSALAVE-----------KGKEKVVSDDRQQKHSRRDWKRDVECFHCHKKDGVQRGRTE
        M+  VSNS G + LK+++I D   AEEIR++ +G+ S     SAL +E           +G+ K ++ +R    SR    + V+C++C K    +R    
Subjt:  MKTTVSNSLGDKSLKFSEICDAAFAEEIRRKGSGKESTFVQSSALAVE-----------KGKEKVVSDDRQQKHSRRDWKRDVECFHCHKKDGVQRGRTE

Query:  PATKTTRTDQEDLPSIQEEQLGSQ
        P  K    + +    + EE L S+
Subjt:  PATKTTRTDQEDLPSIQEEQLGSQ

KAB5561215.1 hypothetical protein DKX38_006172 [Salix brachista]5.6e-1945.38Show/hide
Query:  KFDGANFEYWKMQIKDYLTCKKLN-KALKERPVGMKDEDWVETNEQAVASIRLCLSMNVASLVANEMTIIDLMKALENSWETMKTTVSNSLGDKSLKFSE
        K DG +F YWKMQI+DYL  KKL+   L ++P  MKDE+W+  + Q +  IRL L+  VA  V  E T   LM  L   WE M+TT+SNS G   L + +
Subjt:  KFDGANFEYWKMQIKDYLTCKKLN-KALKERPVGMKDEDWVETNEQAVASIRLCLSMNVASLVANEMTIIDLMKALENSWETMKTTVSNSLGDKSLKFSE

Query:  ICDAAFAEEIRRKGSGKESTFVQSSALAVE
        I D    EE+RR+ +G+ ST    S L VE
Subjt:  ICDAAFAEEIRRKGSGKESTFVQSSALAVE

KAE8686631.1 Piezo-type mechanosensitive ion channel-like protein [Hibiscus syriacus]5.6e-1937.04Show/hide
Query:  KFDGANFEYWKMQIKDYLTCKKLNKAL-KERPVGMKDEDWVETNEQAVASIRLCLSMNVASLVANEMTIIDLMKALENSWE-------------------
        KFDGA+F +WKMQI+D+L  K L + L +++P GMKDEDW   + QA+  IRL LS NVA  +A E T   LM AL + +E                   
Subjt:  KFDGANFEYWKMQIKDYLTCKKLNKAL-KERPVGMKDEDWVETNEQAVASIRLCLSMNVASLVANEMTIIDLMKALENSWE-------------------

Query:  ----------------TMKTTVSNSLGDKSLKFSEICDAAFAEEIRRKGSGKESTFVQSSALAVE-KGKEKVVSDDRQQKHSRRDWKR----DVECFHCH
                        T + TVS+S G+  LKF ++ D   +EEIRR+ SG+ ST   SSAL  E +G+    + +R +  SRR   R    D  C++C 
Subjt:  ----------------TMKTTVSNSLGDKSLKFSEICDAAFAEEIRRKGSGKESTFVQSSALAVE-KGKEKVVSDDRQQKHSRRDWKR----DVECFHCH

Query:  KKDGVQRGRTEPATKT
        KK   +R    P   T
Subjt:  KKDGVQRGRTEPATKT

RVW74967.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]4.3e-1936.07Show/hide
Query:  KFDGANFEYWKMQIKDYLTCKKLN-KALKERPVGMKDEDWVETNEQAVASIRLCLSMNVASLVANEMTIIDLMKALE------------------NSWET
        KF+G +F YW+MQI+DYL  +KL+   L  +P  MK E+W   + Q +  IRL LS +VA  V  E T  DLMKAL                   NSWE 
Subjt:  KFDGANFEYWKMQIKDYLTCKKLN-KALKERPVGMKDEDWVETNEQAVASIRLCLSMNVASLVANEMTIIDLMKALE------------------NSWET

Query:  MKTTVSNSLGDKSLKFSEICDAAFAEEIRRKGSGKESTFVQSSALAVE---KGKEKVVSDDR------QQKHSRRDWKRDVECFHCHKKDGVQRGRTEPA
        M+ TVSNS G + LK+++I D   AEEIRR+ +G+ S    SSAL +E   +G ++  +  R       Q  S+    + V+C++C K    +R    P 
Subjt:  MKTTVSNSLGDKSLKFSEICDAAFAEEIRRKGSGKESTFVQSSALAVE---KGKEKVVSDDR------QQKHSRRDWKRDVECFHCHKKDGVQRGRTEPA

Query:  TKTTRTDQEDLPSIQEEQL
         K    +++D P++  E++
Subjt:  TKTTRTDQEDLPSIQEEQL

XP_022138046.1 kirola-like [Momordica charantia]7.6e-2449.43Show/hide
Query:  MKTTVSNSLGDKSLKFSEICDAAFAEEIRRKGSGKESTFVQSSALAVEKGKEKVVSDDRQQKHSRRDWKRDVECFHCHKKDGVQRGRTEPATKTTRTDQE
        MKT VSNSLGDKSLKFSEICDAA AEEIRRK SGKE T +Q SALAVEKGKEKV SDD                                          
Subjt:  MKTTVSNSLGDKSLKFSEICDAAFAEEIRRKGSGKESTFVQSSALAVEKGKEKVVSDDRQQKHSRRDWKRDVECFHCHKKDGVQRGRTEPATKTTRTDQE

Query:  DLPSIQEEQLGSQRTRTCSLGYQGLSSVVRRMRELMKSRQRTVASEKMNSVGAEVKNEVSILAAGLNTFVKSSVGS
                                     RRM ELMKSRQ+TVASEKMN VG EV N VSILA  LNT VKS+VGS
Subjt:  DLPSIQEEQLGSQRTRTCSLGYQGLSSVVRRMRELMKSRQRTVASEKMNSVGAEVKNEVSILAAGLNTFVKSSVGS

TrEMBL top hitse value%identityAlignment
A0A438GRY9 Retrovirus-related Pol polyprotein from transposon TNT 1-942.1e-1936.07Show/hide
Query:  KFDGANFEYWKMQIKDYLTCKKLN-KALKERPVGMKDEDWVETNEQAVASIRLCLSMNVASLVANEMTIIDLMKALE------------------NSWET
        KF+G +F YW+MQI+DYL  +KL+   L  +P  MK E+W   + Q +  IRL LS +VA  V  E T  DLMKAL                   NSWE 
Subjt:  KFDGANFEYWKMQIKDYLTCKKLN-KALKERPVGMKDEDWVETNEQAVASIRLCLSMNVASLVANEMTIIDLMKALE------------------NSWET

Query:  MKTTVSNSLGDKSLKFSEICDAAFAEEIRRKGSGKESTFVQSSALAVE---KGKEKVVSDDR------QQKHSRRDWKRDVECFHCHKKDGVQRGRTEPA
        M+ TVSNS G + LK+++I D   AEEIRR+ +G+ S    SSAL +E   +G ++  +  R       Q  S+    + V+C++C K    +R    P 
Subjt:  MKTTVSNSLGDKSLKFSEICDAAFAEEIRRKGSGKESTFVQSSALAVE---KGKEKVVSDDR------QQKHSRRDWKRDVECFHCHKKDGVQRGRTEPA

Query:  TKTTRTDQEDLPSIQEEQL
         K    +++D P++  E++
Subjt:  TKTTRTDQEDLPSIQEEQL

A0A5N5N166 Uncharacterized protein2.7e-1945.38Show/hide
Query:  KFDGANFEYWKMQIKDYLTCKKLN-KALKERPVGMKDEDWVETNEQAVASIRLCLSMNVASLVANEMTIIDLMKALENSWETMKTTVSNSLGDKSLKFSE
        K DG +F YWKMQI+DYL  KKL+   L ++P  MKDE+W+  + Q +  IRL L+  VA  V  E T   LM  L   WE M+TT+SNS G   L + +
Subjt:  KFDGANFEYWKMQIKDYLTCKKLN-KALKERPVGMKDEDWVETNEQAVASIRLCLSMNVASLVANEMTIIDLMKALENSWETMKTTVSNSLGDKSLKFSE

Query:  ICDAAFAEEIRRKGSGKESTFVQSSALAVE
        I D    EE+RR+ +G+ ST    S L VE
Subjt:  ICDAAFAEEIRRKGSGKESTFVQSSALAVE

A0A6A2Z3T6 Piezo-type mechanosensitive ion channel-like protein2.7e-1937.04Show/hide
Query:  KFDGANFEYWKMQIKDYLTCKKLNKAL-KERPVGMKDEDWVETNEQAVASIRLCLSMNVASLVANEMTIIDLMKALENSWE-------------------
        KFDGA+F +WKMQI+D+L  K L + L +++P GMKDEDW   + QA+  IRL LS NVA  +A E T   LM AL + +E                   
Subjt:  KFDGANFEYWKMQIKDYLTCKKLNKAL-KERPVGMKDEDWVETNEQAVASIRLCLSMNVASLVANEMTIIDLMKALENSWE-------------------

Query:  ----------------TMKTTVSNSLGDKSLKFSEICDAAFAEEIRRKGSGKESTFVQSSALAVE-KGKEKVVSDDRQQKHSRRDWKR----DVECFHCH
                        T + TVS+S G+  LKF ++ D   +EEIRR+ SG+ ST   SSAL  E +G+    + +R +  SRR   R    D  C++C 
Subjt:  ----------------TMKTTVSNSLGDKSLKFSEICDAAFAEEIRRKGSGKESTFVQSSALAVE-KGKEKVVSDDRQQKHSRRDWKR----DVECFHCH

Query:  KKDGVQRGRTEPATKT
        KK   +R    P   T
Subjt:  KKDGVQRGRTEPATKT

A0A6J1C8L4 kirola-like3.7e-2449.43Show/hide
Query:  MKTTVSNSLGDKSLKFSEICDAAFAEEIRRKGSGKESTFVQSSALAVEKGKEKVVSDDRQQKHSRRDWKRDVECFHCHKKDGVQRGRTEPATKTTRTDQE
        MKT VSNSLGDKSLKFSEICDAA AEEIRRK SGKE T +Q SALAVEKGKEKV SDD                                          
Subjt:  MKTTVSNSLGDKSLKFSEICDAAFAEEIRRKGSGKESTFVQSSALAVEKGKEKVVSDDRQQKHSRRDWKRDVECFHCHKKDGVQRGRTEPATKTTRTDQE

Query:  DLPSIQEEQLGSQRTRTCSLGYQGLSSVVRRMRELMKSRQRTVASEKMNSVGAEVKNEVSILAAGLNTFVKSSVGS
                                     RRM ELMKSRQ+TVASEKMN VG EV N VSILA  LNT VKS+VGS
Subjt:  DLPSIQEEQLGSQRTRTCSLGYQGLSSVVRRMRELMKSRQRTVASEKMNSVGAEVKNEVSILAAGLNTFVKSSVGS

A0A803LFR5 Uncharacterized protein2.7e-1950.83Show/hide
Query:  KFDGANFEYWKMQIKDYLTCKKLNKALKE-RPVGMKDEDWVETNEQAVASIRLCLSMNVASLVANEMTIIDLMKALENSWETMKTTVSNSLGDKSLKFSE
        KFDGA+F +WKMQIKDYL  KKL + L E +P GMKDEDW   + QA+  IRL  S N+A  +A E T  D       SW    TTVS+S G   LKF++
Subjt:  KFDGANFEYWKMQIKDYLTCKKLNKALKE-RPVGMKDEDWVETNEQAVASIRLCLSMNVASLVANEMTIIDLMKALENSWETMKTTVSNSLGDKSLKFSE

Query:  ICDAAFAEEIRRKGSGKEST
        + D   +EEIRR+ SG+ ST
Subjt:  ICDAAFAEEIRRKGSGKEST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTCGATGGGGCCAATTTTGAATATTGGAAGATGCAGATTAAGGATTACTTGACCTGCAAGAAGTTGAATAAAGCTTTGAAGGAACGACCAGTAGGGATG
AAAGATGAAGATTGGGTGGAGACGAATGAACAGGCAGTTGCCTCTATCAGATTGTGTTTGTCGATGAATGTGGCAAGTCTCGTAGCAAACGAAATGACAATAATA
GATCTGATGAAAGCACTGGAGAATAGTTGGGAAACGATGAAGACAACAGTGTCAAATTCGTTAGGAGACAAATCTTTGAAATTTTCAGAAATTTGTGATGCGGCA
TTTGCTGAAGAAATTCGCAGAAAGGGGAGTGGAAAAGAATCTACTTTCGTACAAAGCTCAGCATTGGCTGTCGAAAAAGGTAAAGAGAAGGTTGTGTCTGATGAC
AGGCAGCAGAAGCATAGTAGGAGGGATTGGAAGAGAGATGTTGAATGTTTTCACTGCCACAAAAAAGATGGTGTCCAAAGAGGTAGGACTGAGCCAGCAACAAAG
ACAACCAGAACAGATCAGGAGGATCTGCCATCAATTCAGGAAGAACAATTGGGAAGTCAAAGAACGAGAACATGTTCTTTAGGTTATCAGGGATTATCCTCAGTT
GTCAGACGAATGAGAGAATTGATGAAGTCGCGTCAGCGAACAGTTGCATCAGAGAAGATGAACTCAGTAGGTGCTGAAGTAAAGAATGAAGTTTCAATTCTGGCA
GCAGGCTTGAATACATTTGTCAAGTCATCAGTGGGAAGTTCTTTCTTCAAGAATCAGTGTTTGAGAACGAAGAAGGAAGCTTCAAATATCGCCACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTCGATGGGGCCAATTTTGAATATTGGAAGATGCAGATTAAGGATTACTTGACCTGCAAGAAGTTGAATAAAGCTTTGAAGGAACGACCAGTAGGGATG
AAAGATGAAGATTGGGTGGAGACGAATGAACAGGCAGTTGCCTCTATCAGATTGTGTTTGTCGATGAATGTGGCAAGTCTCGTAGCAAACGAAATGACAATAATA
GATCTGATGAAAGCACTGGAGAATAGTTGGGAAACGATGAAGACAACAGTGTCAAATTCGTTAGGAGACAAATCTTTGAAATTTTCAGAAATTTGTGATGCGGCA
TTTGCTGAAGAAATTCGCAGAAAGGGGAGTGGAAAAGAATCTACTTTCGTACAAAGCTCAGCATTGGCTGTCGAAAAAGGTAAAGAGAAGGTTGTGTCTGATGAC
AGGCAGCAGAAGCATAGTAGGAGGGATTGGAAGAGAGATGTTGAATGTTTTCACTGCCACAAAAAAGATGGTGTCCAAAGAGGTAGGACTGAGCCAGCAACAAAG
ACAACCAGAACAGATCAGGAGGATCTGCCATCAATTCAGGAAGAACAATTGGGAAGTCAAAGAACGAGAACATGTTCTTTAGGTTATCAGGGATTATCCTCAGTT
GTCAGACGAATGAGAGAATTGATGAAGTCGCGTCAGCGAACAGTTGCATCAGAGAAGATGAACTCAGTAGGTGCTGAAGTAAAGAATGAAGTTTCAATTCTGGCA
GCAGGCTTGAATACATTTGTCAAGTCATCAGTGGGAAGTTCTTTCTTCAAGAATCAGTGTTTGAGAACGAAGAAGGAAGCTTCAAATATCGCCACTTAG
Protein sequenceShow/hide protein sequence
MKFDGANFEYWKMQIKDYLTCKKLNKALKERPVGMKDEDWVETNEQAVASIRLCLSMNVASLVANEMTIIDLMKALENSWETMKTTVSNSLGDKSLKFSEICDAA
FAEEIRRKGSGKESTFVQSSALAVEKGKEKVVSDDRQQKHSRRDWKRDVECFHCHKKDGVQRGRTEPATKTTRTDQEDLPSIQEEQLGSQRTRTCSLGYQGLSSV
VRRMRELMKSRQRTVASEKMNSVGAEVKNEVSILAAGLNTFVKSSVGSSFFKNQCLRTKKEASNIAT