; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc01g13580 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g13580
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRNA polymerase II transcriptional coactivator KIWI-like
Genome locationchr1:8372378..8377645
RNA-Seq ExpressionMoc01g13580
SyntenyMoc01g13580
Gene Ontology termsGO:0060261 - positive regulation of transcription initiation from RNA polymerase II promoter (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005667 - transcription factor complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR003173 - Transcriptional coactivator p15 (PC4), C-terminal
IPR009044 - ssDNA-binding transcriptional regulator
IPR045125 - RNA polymerase II transcriptional coactivator Sub1/Tcp4-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603408.1 RNA polymerase II transcriptional coactivator KIWI, partial [Cucurbita argyrosperma subsp. sororia]2.6e-4692.31Show/hide
Query:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNEN
        MSARGKRKDD++H SEGDAPPKKT +KDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLS+DQWNVLRNHV+EIDKAVNEN
Subjt:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNEN

Query:  SLGN
        SL N
Subjt:  SLGN

XP_022149410.1 RNA polymerase II transcriptional coactivator KIWI-like isoform X1 [Momordica charantia]5.2e-50100Show/hide
Query:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNEN
        MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNEN
Subjt:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNEN

Query:  SLGN
        SLGN
Subjt:  SLGN

XP_022932999.1 RNA polymerase II transcriptional coactivator KIWI-like isoform X1 [Cucurbita moschata]1.0e-4591.35Show/hide
Query:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNEN
        MSARGKRKDD++H  EGDAPPKKT +KDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLS+DQWNVLRNHV+EIDKAVNEN
Subjt:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNEN

Query:  SLGN
        SLG+
Subjt:  SLGN

XP_023518433.1 RNA polymerase II transcriptional coactivator KIWI-like [Cucurbita pepo subsp. pepo]5.9e-4695.05Show/hide
Query:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNEN
        MSARGKRKDD++HASEGDAPPKKT KKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGK+MPGKKGISLS+DQWNVLRNHVEEIDKAVNEN
Subjt:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNEN

Query:  S
        S
Subjt:  S

XP_023543027.1 RNA polymerase II transcriptional coactivator KIWI-like isoform X2 [Cucurbita pepo subsp. pepo]5.9e-4691.35Show/hide
Query:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNEN
        MSARGKRK+D++H SEGDAPPKKT +KDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLS+DQWNVLRNHV+EIDKAVNEN
Subjt:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNEN

Query:  SLGN
        SLG+
Subjt:  SLGN

TrEMBL top hitse value%identityAlignment
A0A6J1D5M3 RNA polymerase II transcriptional coactivator KIWI-like isoform X12.5e-50100Show/hide
Query:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNEN
        MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNEN
Subjt:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNEN

Query:  SLGN
        SLGN
Subjt:  SLGN

A0A6J1EHI0 RNA polymerase II transcriptional coactivator KIWI-like8.3e-4694.06Show/hide
Query:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNEN
        MSARGKRKDD++HASEGDAPPKKT KKDS+ETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGK+MPGKKGISLS+DQWNVLRNHVEEIDKAVNEN
Subjt:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNEN

Query:  S
        S
Subjt:  S

A0A6J1EYI2 RNA polymerase II transcriptional coactivator KIWI-like isoform X14.9e-4691.35Show/hide
Query:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNEN
        MSARGKRKDD++H  EGDAPPKKT +KDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLS+DQWNVLRNHV+EIDKAVNEN
Subjt:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNEN

Query:  SLGN
        SLG+
Subjt:  SLGN

A0A6J1HRT2 RNA polymerase II transcriptional coactivator KIWI-like isoform X12.4e-4593.07Show/hide
Query:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNEN
        MSARGKRKDD++HASEGDAPPKKT KKDS+ETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGK+MPGKKG SLS+DQWNVLRNHVEEIDKAVNEN
Subjt:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNEN

Query:  S
        S
Subjt:  S

A0A6J1IRG1 RNA polymerase II transcriptional coactivator KIWI-like isoform X15.4e-4588.46Show/hide
Query:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNEN
        MSARGKR+DD++H SEGDAPPKKT +KDSDETDEIVVCEISKNR+V+VRNWQGKIVVDIREFYVKDGKQMPGKKGISLS+DQWNVLRNHV+EIDKAV+EN
Subjt:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNEN

Query:  SLGN
        SLG+
Subjt:  SLGN

SwissProt top hitse value%identityAlignment
O65154 RNA polymerase II transcriptional coactivator KIWI1.5e-3166.36Show/hide
Query:  MSARGKRKDDDEHASEGD----APPKKTSK--KDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSMDQWNVLRNHVEEID
        MS+RGKRKD+D  AS+ +    AP KK +K   DSD++D+IVVC ISKNRRV VRNW GKI +DIREFYVKDGK +PGKKGISLS+DQWN LRNH E+I+
Subjt:  MSARGKRKDDDEHASEGD----APPKKTSK--KDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSMDQWNVLRNHVEEID

Query:  KAVNENS
        KA+++ S
Subjt:  KAVNENS

O65155 RNA polymerase II transcriptional coactivator KELP4.9e-1134.04Show/hide
Query:  KRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNE
        + +D D+   +G+        K+ D+  ++++C +S  RRV ++ ++GK +V IRE+Y KDGK++P  KGISL+ +QW+  + ++  I+ AV +
Subjt:  KRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNE

P11031 Activated RNA polymerase II transcriptional coactivator p152.4e-1039.29Show/hide
Query:  GDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYV-KDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNE
        G+      S K S  + +  + +I K R V VR+++GKI++DIRE+++  +G+  PG+KGISL+M+QW+ L+  + +ID AV +
Subjt:  GDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYV-KDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNE

Q5ZK63 Activated RNA polymerase II transcriptional coactivator p154.1e-1037.23Show/hide
Query:  RKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYV-KDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNE
        +K     +S+G A  K++S +D +      + +I K R V VR+++GK+++DIRE+++ ++G+  PG+KGISL+ +QWN L+  + +ID AV +
Subjt:  RKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYV-KDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNE

Q63396 Activated RNA polymerase II transcriptional coactivator p151.9e-1039.29Show/hide
Query:  GDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYV-KDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNE
        G++     S K S  + +  + +I K R V VR+++GKI++DIRE+++  +G+  PG+KGISL+M+QW+ L+  + +ID AV +
Subjt:  GDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYV-KDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNE

Arabidopsis top hitse value%identityAlignment
AT4G10920.1 transcriptional coactivator p15 (PC4) family protein (KELP)3.5e-1234.04Show/hide
Query:  KRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNE
        + +D D+   +G+        K+ D+  ++++C +S  RRV ++ ++GK +V IRE+Y KDGK++P  KGISL+ +QW+  + ++  I+ AV +
Subjt:  KRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNE

AT5G09240.1 ssDNA-binding transcriptional regulator9.8e-2354.13Show/hide
Query:  MSARGKRKD------DDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMP--GKKGISLSMDQWNVLRNHVEE
        MS  GKRKD      DD   SE  APPKK + K +DE ++I +C + KNRRV VRN  G+I + IR+F+VKDG  +P   K+GISLS++QWN LRNH E+
Subjt:  MSARGKRKD------DDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMP--GKKGISLSMDQWNVLRNHVEE

Query:  IDKAVNENS
        IDKA++E S
Subjt:  IDKAVNENS

AT5G09240.2 ssDNA-binding transcriptional regulator3.3e-1843.07Show/hide
Query:  MSARGKRKD------DDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMP--GKKGISLSMD-----------
        MS  GKRKD      DD   SE  APPKK + K +DE ++I +C + KNRRV VRN  G+I + IR+F+VKDG  +P   K+GISLS++           
Subjt:  MSARGKRKD------DDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMP--GKKGISLSMD-----------

Query:  -----------------QWNVLRNHVEEIDKAVNENS
                         QWN LRNH E+IDKA++E S
Subjt:  -----------------QWNVLRNHVEEIDKAVNENS

AT5G09250.1 ssDNA-binding transcriptional regulator1.0e-3266.36Show/hide
Query:  MSARGKRKDDDEHASEGD----APPKKTSK--KDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSMDQWNVLRNHVEEID
        MS+RGKRKD+D  AS+ +    AP KK +K   DSD++D+IVVC ISKNRRV VRNW GKI +DIREFYVKDGK +PGKKGISLS+DQWN LRNH E+I+
Subjt:  MSARGKRKDDDEHASEGD----APPKKTSK--KDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSMDQWNVLRNHVEEID

Query:  KAVNENS
        KA+++ S
Subjt:  KAVNENS

AT5G09250.2 ssDNA-binding transcriptional regulator1.1e-2166.67Show/hide
Query:  MSARGKRKDDDEHASEGD----APPKKTSK--KDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG
        MS+RGKRKD+D  AS+ +    AP KK +K   DSD++D+IVVC ISKNRRV VRNW GKI +DIREFYVKDGK +PGKKG
Subjt:  MSARGKRKDDDEHASEGD----APPKKTSK--KDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCAAGAGGAAAGCGAAAGGATGACGATGAACACGCATCCGAAGGGGACGCTCCTCCCAAGAAGACATCGAAGAAAGACTCTGACGAAACCGACGAAATCGTCGT
CTGCGAGATTTCGAAAAATCGGAGGGTTATGGTGAGGAACTGGCAGGGAAAGATTGTGGTGGATATTCGGGAGTTTTATGTCAAAGATGGGAAGCAGATGCCTGGAAAAA
AAGGCATATCGCTATCCATGGATCAGTGGAACGTTCTCCGCAATCATGTAGAAGAAATTGACAAGGCTGTTAATGAAAATTCGTTAGGAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTGCAAGAGGAAAGCGAAAGGATGACGATGAACACGCATCCGAAGGGGACGCTCCTCCCAAGAAGACATCGAAGAAAGACTCTGACGAAACCGACGAAATCGTCGT
CTGCGAGATTTCGAAAAATCGGAGGGTTATGGTGAGGAACTGGCAGGGAAAGATTGTGGTGGATATTCGGGAGTTTTATGTCAAAGATGGGAAGCAGATGCCTGGAAAAA
AAGGCATATCGCTATCCATGGATCAGTGGAACGTTCTCCGCAATCATGTAGAAGAAATTGACAAGGCTGTTAATGAAAATTCGTTAGGAAATTAG
Protein sequenceShow/hide protein sequence
MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNENSLGN