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Moc01g14360 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g14360
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr1:8933946..8934533
RNA-Seq ExpressionMoc01g14360
SyntenyMoc01g14360
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149419.1 uncharacterized protein LOC111017849 [Momordica charantia]1.2e-0633.7Show/hide
Query:  SQSIAERSFGGVRLCGCNTQQWYQDLPLHSVGSYQDLVSKFVDQFHYSCINRRTKAHLSSVEQKPDNNLKKYVARFSNERLRMPNCNESVAL
        S +I  R+F  + L G N + WY+ LP  S+ +Y  L  +F+ QF+    +++T  HL++++QK    L++YV RF  E+L++ +C++  A+
Subjt:  SQSIAERSFGGVRLCGCNTQQWYQDLPLHSVGSYQDLVSKFVDQFHYSCINRRTKAHLSSVEQKPDNNLKKYVARFSNERLRMPNCNESVAL

XP_022154446.1 uncharacterized protein LOC111021718 [Momordica charantia]7.2e-0734.78Show/hide
Query:  SQSIAERSFGGVRLCGCNTQQWYQDLPLHSVGSYQDLVSKFVDQFHYSCINRRTKAHLSSVEQKPDNNLKKYVARFSNERLRMPNCNESVAL
        S +I  R+F  + L G + + WY+ LP  S+ +Y  L  +F+ QF     NR+T  HL++V QK    L++YV RF  E+L++ +C++  ++
Subjt:  SQSIAERSFGGVRLCGCNTQQWYQDLPLHSVGSYQDLVSKFVDQFHYSCINRRTKAHLSSVEQKPDNNLKKYVARFSNERLRMPNCNESVAL

XP_022155128.1 uncharacterized protein LOC111022267 [Momordica charantia]2.1e-0635.21Show/hide
Query:  WYQDLPLHSVGSYQDLVSKFVDQFHYSCINRRTKAHLSSVEQKPDNNLKKYVARFSNERLRMPNCNESVAL
        WY+ LP  S+ +Y  L  +F+ QF     +R+T  HL+++ QK    L++YV RF  E+L++ +C++  A+
Subjt:  WYQDLPLHSVGSYQDLVSKFVDQFHYSCINRRTKAHLSSVEQKPDNNLKKYVARFSNERLRMPNCNESVAL

XP_022157448.1 uncharacterized protein LOC111024144 [Momordica charantia]9.4e-0735.23Show/hide
Query:  SQSIAERSFGGVRLCGCNTQQWYQDLPLHSVGSYQDLVSKFVDQFHYSCINRRTKAHLSSVEQKPDNNLKKYVARFSNERLRMPNCNE
        S +I  R+F  + L G N + WY+ L   S+ +Y  L  +F+ QF Y   +R+T  HL+++ QK    L++YV RF  E+L++ +C++
Subjt:  SQSIAERSFGGVRLCGCNTQQWYQDLPLHSVGSYQDLVSKFVDQFHYSCINRRTKAHLSSVEQKPDNNLKKYVARFSNERLRMPNCNE

XP_022158659.1 uncharacterized protein LOC111025122 [Momordica charantia]1.5e-0736Show/hide
Query:  NTQQWYQDLPLHSVGSYQDLVSKFVDQFHYSCINRRTKAHLSSVEQKPDNNLKKYVARFSNERLRMPNCNESVAL
        + Q WY+ LP+ S+ +Y  L  KF+ QF     +R+T  HL+++ +K +  LK+YV RF  E+L++ +C++ +A+
Subjt:  NTQQWYQDLPLHSVGSYQDLVSKFVDQFHYSCINRRTKAHLSSVEQKPDNNLKKYVARFSNERLRMPNCNESVAL

TrEMBL top hitse value%identityAlignment
A0A6J1D701 uncharacterized protein LOC1110178496.0e-0733.7Show/hide
Query:  SQSIAERSFGGVRLCGCNTQQWYQDLPLHSVGSYQDLVSKFVDQFHYSCINRRTKAHLSSVEQKPDNNLKKYVARFSNERLRMPNCNESVAL
        S +I  R+F  + L G N + WY+ LP  S+ +Y  L  +F+ QF+    +++T  HL++++QK    L++YV RF  E+L++ +C++  A+
Subjt:  SQSIAERSFGGVRLCGCNTQQWYQDLPLHSVGSYQDLVSKFVDQFHYSCINRRTKAHLSSVEQKPDNNLKKYVARFSNERLRMPNCNESVAL

A0A6J1DG02 uncharacterized protein LOC1110201051.0e-0635.21Show/hide
Query:  WYQDLPLHSVGSYQDLVSKFVDQFHYSCINRRTKAHLSSVEQKPDNNLKKYVARFSNERLRMPNCNESVAL
        WY+ LP  S+ +Y  L  +F+ QF     +R+T  HL+++ QK    L++YV RF  E+L++ +C++  A+
Subjt:  WYQDLPLHSVGSYQDLVSKFVDQFHYSCINRRTKAHLSSVEQKPDNNLKKYVARFSNERLRMPNCNESVAL

A0A6J1DNR4 uncharacterized protein LOC1110217183.5e-0734.78Show/hide
Query:  SQSIAERSFGGVRLCGCNTQQWYQDLPLHSVGSYQDLVSKFVDQFHYSCINRRTKAHLSSVEQKPDNNLKKYVARFSNERLRMPNCNESVAL
        S +I  R+F  + L G + + WY+ LP  S+ +Y  L  +F+ QF     NR+T  HL++V QK    L++YV RF  E+L++ +C++  ++
Subjt:  SQSIAERSFGGVRLCGCNTQQWYQDLPLHSVGSYQDLVSKFVDQFHYSCINRRTKAHLSSVEQKPDNNLKKYVARFSNERLRMPNCNESVAL

A0A6J1DTD9 uncharacterized protein LOC1110241444.6e-0735.23Show/hide
Query:  SQSIAERSFGGVRLCGCNTQQWYQDLPLHSVGSYQDLVSKFVDQFHYSCINRRTKAHLSSVEQKPDNNLKKYVARFSNERLRMPNCNE
        S +I  R+F  + L G N + WY+ L   S+ +Y  L  +F+ QF Y   +R+T  HL+++ QK    L++YV RF  E+L++ +C++
Subjt:  SQSIAERSFGGVRLCGCNTQQWYQDLPLHSVGSYQDLVSKFVDQFHYSCINRRTKAHLSSVEQKPDNNLKKYVARFSNERLRMPNCNE

A0A6J1E023 uncharacterized protein LOC1110251227.0e-0836Show/hide
Query:  NTQQWYQDLPLHSVGSYQDLVSKFVDQFHYSCINRRTKAHLSSVEQKPDNNLKKYVARFSNERLRMPNCNESVAL
        + Q WY+ LP+ S+ +Y  L  KF+ QF     +R+T  HL+++ +K +  LK+YV RF  E+L++ +C++ +A+
Subjt:  NTQQWYQDLPLHSVGSYQDLVSKFVDQFHYSCINRRTKAHLSSVEQKPDNNLKKYVARFSNERLRMPNCNESVAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATTTTTGTTTAAACTGTACAGAATTGTTCTGTACAGTGGTTCTTCCCCTGAAAAAGCAAGAAAGCTCTCTCAACCCAAATCTCTCTCAATTTCTCTCTTG
GCTTCCAATCTTTGCTCCCACAAGGAAGGTCTTCGTTCCCAGAGCATAGCGGAAAGATCGTTTGGTGGTGTACGGTTGTGTGGATGCAACACTCAGCAATGGTAT
CAAGACCTCCCGCTACACTCGGTCGGGAGCTACCAGGACCTGGTCAGTAAGTTCGTAGACCAATTCCACTACTCTTGCATCAACAGGCGCACAAAGGCACATCTC
TCGTCGGTAGAGCAAAAGCCCGACAATAATCTAAAGAAGTATGTCGCCCGCTTCTCCAATGAACGACTCCGGATGCCTAATTGCAATGAAAGTGTGGCCCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCATTTTTGTTTAAACTGTACAGAATTGTTCTGTACAGTGGTTCTTCCCCTGAAAAAGCAAGAAAGCTCTCTCAACCCAAATCTCTCTCAATTTCTCTCTTG
GCTTCCAATCTTTGCTCCCACAAGGAAGGTCTTCGTTCCCAGAGCATAGCGGAAAGATCGTTTGGTGGTGTACGGTTGTGTGGATGCAACACTCAGCAATGGTAT
CAAGACCTCCCGCTACACTCGGTCGGGAGCTACCAGGACCTGGTCAGTAAGTTCGTAGACCAATTCCACTACTCTTGCATCAACAGGCGCACAAAGGCACATCTC
TCGTCGGTAGAGCAAAAGCCCGACAATAATCTAAAGAAGTATGTCGCCCGCTTCTCCAATGAACGACTCCGGATGCCTAATTGCAATGAAAGTGTGGCCCTATGA
Protein sequenceShow/hide protein sequence
MSFLFKLYRIVLYSGSSPEKARKLSQPKSLSISLLASNLCSHKEGLRSQSIAERSFGGVRLCGCNTQQWYQDLPLHSVGSYQDLVSKFVDQFHYSCINRRTKAHL
SSVEQKPDNNLKKYVARFSNERLRMPNCNESVAL