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Moc01g14380 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g14380
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr1:8937031..8937366
RNA-Seq ExpressionMoc01g14380
SyntenyMoc01g14380
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022135947.1 uncharacterized protein LOC111007781 [Momordica charantia]1.0e-1953.61Show/hide
Query:  MGARHLNVISDSHLIFNQVNQEYQARDSRMALYVRKVRALLNAFETSSVEQAPRSKNANTDALAHLTSSYDTDLSRTVLVEVMSESSLPEPEMMDID
        +GA H+ V SDS L+ NQ+ +EYQA+DSRM  Y+ KVR+ L  F+T  V Q PR +N+N DALA L S+Y+TDL+R+VLVE++   S+ EP++M+ID
Subjt:  MGARHLNVISDSHLIFNQVNQEYQARDSRMALYVRKVRALLNAFETSSVEQAPRSKNANTDALAHLTSSYDTDLSRTVLVEVMSESSLPEPEMMDID
XP_022144032.1 uncharacterized protein LOC111013824 [Momordica charantia]1.1e-1851Show/hide
Query:  ARHLNVISDSHLIFNQVNQEYQARDSRMALYVRKVRALLNAFETSSVEQAPRSKNANTDALAHLTSSYDTDLSRTVLVEVMSESSLPEPEMMDIDRLDAS
        A H+ V SDS L+ NQ+ +EYQ +DSRM  Y+ KVR+ L  FET  V Q PRS+N+NTDALA L S+Y+TDL+R+VLV ++   S+ EP++M+++  + S
Subjt:  ARHLNVISDSHLIFNQVNQEYQARDSRMALYVRKVRALLNAFETSSVEQAPRSKNANTDALAHLTSSYDTDLSRTVLVEVMSESSLPEPEMMDIDRLDAS
XP_022152157.1 uncharacterized protein LOC111019946 [Momordica charantia]6.6e-1952.58Show/hide
Query:  MGARHLNVISDSHLIFNQVNQEYQARDSRMALYVRKVRALLNAFETSSVEQAPRSKNANTDALAHLTSSYDTDLSRTVLVEVMSESSLPEPEMMDID
        +GA H+ V SDS LI NQ+ +EYQA+D RM  Y+ KVR+ L  F T  V Q PRS+N+N DALA L S+Y+TDL+R+VLVE++   S+ EP++M+++
Subjt:  MGARHLNVISDSHLIFNQVNQEYQARDSRMALYVRKVRALLNAFETSSVEQAPRSKNANTDALAHLTSSYDTDLSRTVLVEVMSESSLPEPEMMDID
XP_022155127.1 uncharacterized protein LOC111022266 [Momordica charantia]3.8e-1951.92Show/hide
Query:  MGARHLNVISDSHLIFNQVNQEYQARDSRMALYVRKVRALLNAFETSSVEQAPRSKNANTDALAHLTSSYDTDLSRTVLVEVMSESSLPEPEMMDIDRLD
        +GA H+ V SDS L+ NQ+ +EYQ +DSRM  Y+ KVR+ L  F+T  V Q PR  N+N DALA L   Y+TDL+R+VLVE++   S+ EP+MMDID + 
Subjt:  MGARHLNVISDSHLIFNQVNQEYQARDSRMALYVRKVRALLNAFETSSVEQAPRSKNANTDALAHLTSSYDTDLSRTVLVEVMSESSLPEPEMMDIDRLD

Query:  ASDW
         S W
Subjt:  ASDW
XP_022156778.1 uncharacterized protein LOC111023609 [Momordica charantia]1.9e-1851.55Show/hide
Query:  MGARHLNVISDSHLIFNQVNQEYQARDSRMALYVRKVRALLNAFETSSVEQAPRSKNANTDALAHLTSSYDTDLSRTVLVEVMSESSLPEPEMMDID
        +GA H+ V SDS LI NQV +EYQ +D+RM  Y+ KVR+ L+ F+T  V Q PRS+N+N DALA L S+Y+TDL+R+  VE++   S+ EP++M++D
Subjt:  MGARHLNVISDSHLIFNQVNQEYQARDSRMALYVRKVRALLNAFETSSVEQAPRSKNANTDALAHLTSSYDTDLSRTVLVEVMSESSLPEPEMMDID
TrEMBL top hitse value%identityAlignment
A0A6J1C472 uncharacterized protein LOC1110077814.9e-2053.61Show/hide
Query:  MGARHLNVISDSHLIFNQVNQEYQARDSRMALYVRKVRALLNAFETSSVEQAPRSKNANTDALAHLTSSYDTDLSRTVLVEVMSESSLPEPEMMDID
        +GA H+ V SDS L+ NQ+ +EYQA+DSRM  Y+ KVR+ L  F+T  V Q PR +N+N DALA L S+Y+TDL+R+VLVE++   S+ EP++M+ID
Subjt:  MGARHLNVISDSHLIFNQVNQEYQARDSRMALYVRKVRALLNAFETSSVEQAPRSKNANTDALAHLTSSYDTDLSRTVLVEVMSESSLPEPEMMDID
A0A6J1CSJ1 Ribonuclease H5.4e-1951Show/hide
Query:  ARHLNVISDSHLIFNQVNQEYQARDSRMALYVRKVRALLNAFETSSVEQAPRSKNANTDALAHLTSSYDTDLSRTVLVEVMSESSLPEPEMMDIDRLDAS
        A H+ V SDS L+ NQ+ +EYQ +DSRM  Y+ KVR+ L  FET  V Q PRS+N+NTDALA L S+Y+TDL+R+VLV ++   S+ EP++M+++  + S
Subjt:  ARHLNVISDSHLIFNQVNQEYQARDSRMALYVRKVRALLNAFETSSVEQAPRSKNANTDALAHLTSSYDTDLSRTVLVEVMSESSLPEPEMMDIDRLDAS
A0A6J1DFF1 uncharacterized protein LOC1110199463.2e-1952.58Show/hide
Query:  MGARHLNVISDSHLIFNQVNQEYQARDSRMALYVRKVRALLNAFETSSVEQAPRSKNANTDALAHLTSSYDTDLSRTVLVEVMSESSLPEPEMMDID
        +GA H+ V SDS LI NQ+ +EYQA+D RM  Y+ KVR+ L  F T  V Q PRS+N+N DALA L S+Y+TDL+R+VLVE++   S+ EP++M+++
Subjt:  MGARHLNVISDSHLIFNQVNQEYQARDSRMALYVRKVRALLNAFETSSVEQAPRSKNANTDALAHLTSSYDTDLSRTVLVEVMSESSLPEPEMMDID
A0A6J1DNI3 uncharacterized protein LOC1110222661.9e-1951.92Show/hide
Query:  MGARHLNVISDSHLIFNQVNQEYQARDSRMALYVRKVRALLNAFETSSVEQAPRSKNANTDALAHLTSSYDTDLSRTVLVEVMSESSLPEPEMMDIDRLD
        +GA H+ V SDS L+ NQ+ +EYQ +DSRM  Y+ KVR+ L  F+T  V Q PR  N+N DALA L   Y+TDL+R+VLVE++   S+ EP+MMDID + 
Subjt:  MGARHLNVISDSHLIFNQVNQEYQARDSRMALYVRKVRALLNAFETSSVEQAPRSKNANTDALAHLTSSYDTDLSRTVLVEVMSESSLPEPEMMDIDRLD

Query:  ASDW
         S W
Subjt:  ASDW
A0A6J1DSX0 uncharacterized protein LOC1110236269.2e-1953.12Show/hide
Query:  MGARHLNVISDSHLIFNQVNQEYQARDSRMALYVRKVRALLNAFETSSVEQAPRSKNANTDALAHLTSSYDTDLSRTVLVEVMSESSLPEPEMMDI
        MG R L ++SDS LI N V +EYQ +++RM  Y+ K R LL  FE   ++Q PRSKN+N DALA L S+Y+TDL RTV VE+++ESS+ +PE+++I
Subjt:  MGARHLNVISDSHLIFNQVNQEYQARDSRMALYVRKVRALLNAFETSSVEQAPRSKNANTDALAHLTSSYDTDLSRTVLVEVMSESSLPEPEMMDI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCTCGACACCTTAACGTCATCAGCGACTCTCATCTGATCTTCAATCAGGTTAATCAAGAGTACCAAGCCAGGGACAGTCGAATGGCTTTGTACGTCAGGAAGGT
GCGGGCACTTCTGAATGCCTTTGAAACAAGCTCGGTCGAGCAGGCCCCCCGGTCCAAGAACGCCAACACGGACGCTCTAGCCCATCTCACGTCGTCTTATGACACCGACC
TGTCTCGAACCGTACTAGTTGAAGTTATGAGCGAGTCAAGCCTTCCCGAACCGGAGATGATGGACATTGATCGACTCGATGCTTCAGATTGGAAAGCCCAATCAGAAAGC
ATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGGCTCGACACCTTAACGTCATCAGCGACTCTCATCTGATCTTCAATCAGGTTAATCAAGAGTACCAAGCCAGGGACAGTCGAATGGCTTTGTACGTCAGGAAGGT
GCGGGCACTTCTGAATGCCTTTGAAACAAGCTCGGTCGAGCAGGCCCCCCGGTCCAAGAACGCCAACACGGACGCTCTAGCCCATCTCACGTCGTCTTATGACACCGACC
TGTCTCGAACCGTACTAGTTGAAGTTATGAGCGAGTCAAGCCTTCCCGAACCGGAGATGATGGACATTGATCGACTCGATGCTTCAGATTGGAAAGCCCAATCAGAAAGC
ATCTAG
Protein sequenceShow/hide protein sequence
MGARHLNVISDSHLIFNQVNQEYQARDSRMALYVRKVRALLNAFETSSVEQAPRSKNANTDALAHLTSSYDTDLSRTVLVEVMSESSLPEPEMMDIDRLDASDWKAQSES
I