; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc01g14700 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g14700
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr1:9159037..9159909
RNA-Seq ExpressionMoc01g14700
SyntenyMoc01g14700
Gene Ontology termsGO:0043167 - ion binding (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ99683.1 uncharacterized protein E5676_scaffold562G00770 [Cucumis melo var. makuwa]6.8e-1333.67Show/hide
Query:  LMREQFLPTNFDQLLYQQYKRYRQGFKTIVDYIEAFLLLKARTNLVEIEDYKIARYFDGLREDIQDQMDSQPINLL-----TDAITMVTKMTRSF-----
        L++ +FLP N++Q LY QY+  RQG +T+ DYIE F  L AR NL E E ++IAR+   LR DI++++  QP   L         +++T+ T S      
Subjt:  LMREQFLPTNFDQLLYQQYKRYRQGFKTIVDYIEAFLLLKARTNLVEIEDYKIARYFDGLREDIQDQMDSQPINLL-----TDAITMVTKMTRSF-----

Query:  -CGLLFVAQHGTNLQLRNLLHLTLV------------------GHLSNECPQRRALALIDEEDN--------LEPDLELIVEDDPTYVKLDEETCH
          G    AQ   N + R +++   V                  GHLSN CPQR+ +AL D+E++        LE + ELI  D    V    ++ H
Subjt:  -CGLLFVAQHGTNLQLRNLLHLTLV------------------GHLSNECPQRRALALIDEEDN--------LEPDLELIVEDDPTYVKLDEETCH

XP_022138327.1 uncharacterized protein LOC111009540 isoform X1 [Momordica charantia]3.4e-3648.11Show/hide
Query:  MLCLMREQFLPTNFDQLLYQQYKRYRQGFKTIVDYIEAFLLLKARTNLVEIEDYKIARYFDGLREDIQDQMDSQPINLLTDAITMVTKM-----------
        ML LMRE+FLP NF+QLLYQ Y+R RQGFKTI DY EAF  L A+TN+ E EDYKIAR+ DGLREDIQDQMD QPI+LLTDAI M TK+           
Subjt:  MLCLMREQFLPTNFDQLLYQQYKRYRQGFKTIVDYIEAFLLLKARTNLVEIEDYKIARYFDGLREDIQDQMDSQPINLLTDAITMVTKM-----------

Query:  ---------------------------------------TRSFCGLLFVAQHGTNLQLRNLL----HLTLVGHLSNECPQRRALALIDEEDNLEPDLELI
                                               +  F      ++ GTN  +R  L        V HLSNECPQRRALAL+D++D LE D++L 
Subjt:  ---------------------------------------TRSFCGLLFVAQHGTNLQLRNLL----HLTLVGHLSNECPQRRALALIDEEDNLEPDLELI

Query:  VEDDPTYVKLDE
         EDDPTYV+ DE
Subjt:  VEDDPTYVKLDE

XP_022138328.1 uncharacterized protein LOC111009540 isoform X2 [Momordica charantia]3.4e-3648.11Show/hide
Query:  MLCLMREQFLPTNFDQLLYQQYKRYRQGFKTIVDYIEAFLLLKARTNLVEIEDYKIARYFDGLREDIQDQMDSQPINLLTDAITMVTKM-----------
        ML LMRE+FLP NF+QLLYQ Y+R RQGFKTI DY EAF  L A+TN+ E EDYKIAR+ DGLREDIQDQMD QPI+LLTDAI M TK+           
Subjt:  MLCLMREQFLPTNFDQLLYQQYKRYRQGFKTIVDYIEAFLLLKARTNLVEIEDYKIARYFDGLREDIQDQMDSQPINLLTDAITMVTKM-----------

Query:  ---------------------------------------TRSFCGLLFVAQHGTNLQLRNLL----HLTLVGHLSNECPQRRALALIDEEDNLEPDLELI
                                               +  F      ++ GTN  +R  L        V HLSNECPQRRALAL+D++D LE D++L 
Subjt:  ---------------------------------------TRSFCGLLFVAQHGTNLQLRNLL----HLTLVGHLSNECPQRRALALIDEEDNLEPDLELI

Query:  VEDDPTYVKLDE
         EDDPTYV+ DE
Subjt:  VEDDPTYVKLDE

XP_031743026.1 uncharacterized protein LOC116404533 [Cucumis sativus]2.6e-1235.46Show/hide
Query:  LMREQFLPTNFDQLLYQQYKRYRQGFKTIVDYIEAFLLLKARTNLVEIEDYKIARYFDGLREDIQDQMDSQPINLLTDAITMVTKMTRSFCGLLFVAQHG
        L++ +FLP N++Q LY QY+  RQG +T+ +YIE F  L ARTNL E E +++AR+  GLR DI++++  QP   L++AI+    +         +A   
Subjt:  LMREQFLPTNFDQLLYQQYKRYRQGFKTIVDYIEAFLLLKARTNLVEIEDYKIARYFDGLREDIQDQMDSQPINLLTDAITMVTKMTRSFCGLLFVAQHG

Query:  TNLQLRNLLHLTLVGHLSNECPQRRALALIDEEDNLEPDLE
         NL  R+          +N+ P     A   E DN E  +E
Subjt:  TNLQLRNLLHLTLVGHLSNECPQRRALALIDEEDNLEPDLE

XP_031745523.1 uncharacterized protein LOC116405899 [Cucumis sativus]1.4e-1330Show/hide
Query:  LMREQFLPTNFDQLLYQQYKRYRQGFKTIVDYIEAFLLLKARTNLVEIEDYKIARYFDGLREDIQDQMDSQPINLLTDAITMV-----------------
        L++ +FLP N++Q LY QY+  RQG +T+ +YIE F  L ARTNL E E ++IAR+  GLR DI++++  QP+  L++AI++                  
Subjt:  LMREQFLPTNFDQLLYQQYKRYRQGFKTIVDYIEAFLLLKARTNLVEIEDYKIARYFDGLREDIQDQMDSQPINLLTDAITMV-----------------

Query:  ----------TKMTRSFCGLLFVAQHG----------------------------TNLQLRNLLHLTLVGHLSNECPQRRALALIDEEDNLEPDLELIVE
                  T  T           HG                            T   L         GHLSN CPQR+ +AL +EE NL  + E    
Subjt:  ----------TKMTRSFCGLLFVAQHG----------------------------TNLQLRNLLHLTLVGHLSNECPQRRALALIDEEDNLEPDLELIVE

Query:  DDPTYVKLDE
        ++   +++DE
Subjt:  DDPTYVKLDE

TrEMBL top hitse value%identityAlignment
A0A5D3BK55 CCHC-type domain-containing protein3.3e-1333.67Show/hide
Query:  LMREQFLPTNFDQLLYQQYKRYRQGFKTIVDYIEAFLLLKARTNLVEIEDYKIARYFDGLREDIQDQMDSQPINLL-----TDAITMVTKMTRSF-----
        L++ +FLP N++Q LY QY+  RQG +T+ DYIE F  L AR NL E E ++IAR+   LR DI++++  QP   L         +++T+ T S      
Subjt:  LMREQFLPTNFDQLLYQQYKRYRQGFKTIVDYIEAFLLLKARTNLVEIEDYKIARYFDGLREDIQDQMDSQPINLL-----TDAITMVTKMTRSF-----

Query:  -CGLLFVAQHGTNLQLRNLLHLTLV------------------GHLSNECPQRRALALIDEEDN--------LEPDLELIVEDDPTYVKLDEETCH
          G    AQ   N + R +++   V                  GHLSN CPQR+ +AL D+E++        LE + ELI  D    V    ++ H
Subjt:  -CGLLFVAQHGTNLQLRNLLHLTLV------------------GHLSNECPQRRALALIDEEDN--------LEPDLELIVEDDPTYVKLDEETCH

A0A6D2KIE3 Retrotrans_gag domain-containing protein2.1e-1234.34Show/hide
Query:  LMREQFLPTNFDQLLYQQYKRYRQGFKTIVDYIEAFLLLKARTNLVEIEDYKIARYFDGLREDIQDQMDSQPINLLTDAIT------MVTKMTRSFCGL-
        LM ++FLP +++Q+LY+ Y    QG +T+ +Y   F+    R +L E ++ K+ARY  GLR  IQ+++  Q +  + +A +      ++ K TRSF    
Subjt:  LMREQFLPTNFDQLLYQQYKRYRQGFKTIVDYIEAFLLLKARTNLVEIEDYKIARYFDGLREDIQDQMDSQPINLLTDAIT------MVTKMTRSFCGL-

Query:  LFVAQHGTNLQLRNLLHLTLVGHLSNECPQRRALALIDEEDNLEPDLELIVEDDPTYVKLDEETCH
         F  Q+  N +  N      VGH SN CP RR +AL+ EE++ E   E   +D+   V+  EE  H
Subjt:  LFVAQHGTNLQLRNLLHLTLVGHLSNECPQRRALALIDEEDNLEPDLELIVEDDPTYVKLDEETCH

A0A6J1CAS9 uncharacterized protein LOC111009540 isoform X11.6e-3648.11Show/hide
Query:  MLCLMREQFLPTNFDQLLYQQYKRYRQGFKTIVDYIEAFLLLKARTNLVEIEDYKIARYFDGLREDIQDQMDSQPINLLTDAITMVTKM-----------
        ML LMRE+FLP NF+QLLYQ Y+R RQGFKTI DY EAF  L A+TN+ E EDYKIAR+ DGLREDIQDQMD QPI+LLTDAI M TK+           
Subjt:  MLCLMREQFLPTNFDQLLYQQYKRYRQGFKTIVDYIEAFLLLKARTNLVEIEDYKIARYFDGLREDIQDQMDSQPINLLTDAITMVTKM-----------

Query:  ---------------------------------------TRSFCGLLFVAQHGTNLQLRNLL----HLTLVGHLSNECPQRRALALIDEEDNLEPDLELI
                                               +  F      ++ GTN  +R  L        V HLSNECPQRRALAL+D++D LE D++L 
Subjt:  ---------------------------------------TRSFCGLLFVAQHGTNLQLRNLL----HLTLVGHLSNECPQRRALALIDEEDNLEPDLELI

Query:  VEDDPTYVKLDE
         EDDPTYV+ DE
Subjt:  VEDDPTYVKLDE

A0A6J1CCQ8 uncharacterized protein LOC111009540 isoform X21.6e-3648.11Show/hide
Query:  MLCLMREQFLPTNFDQLLYQQYKRYRQGFKTIVDYIEAFLLLKARTNLVEIEDYKIARYFDGLREDIQDQMDSQPINLLTDAITMVTKM-----------
        ML LMRE+FLP NF+QLLYQ Y+R RQGFKTI DY EAF  L A+TN+ E EDYKIAR+ DGLREDIQDQMD QPI+LLTDAI M TK+           
Subjt:  MLCLMREQFLPTNFDQLLYQQYKRYRQGFKTIVDYIEAFLLLKARTNLVEIEDYKIARYFDGLREDIQDQMDSQPINLLTDAITMVTKM-----------

Query:  ---------------------------------------TRSFCGLLFVAQHGTNLQLRNLL----HLTLVGHLSNECPQRRALALIDEEDNLEPDLELI
                                               +  F      ++ GTN  +R  L        V HLSNECPQRRALAL+D++D LE D++L 
Subjt:  ---------------------------------------TRSFCGLLFVAQHGTNLQLRNLL----HLTLVGHLSNECPQRRALALIDEEDNLEPDLELI

Query:  VEDDPTYVKLDE
         EDDPTYV+ DE
Subjt:  VEDDPTYVKLDE

A0A6P9EFL1 uncharacterized protein LOC1183461164.8e-1233.85Show/hide
Query:  LMREQFLPTNFDQLLYQQYKRYRQGFKTIVDYIEAFLLLKARTNLVEIEDYKIARYFDGLREDIQDQMDSQPINLLTDAITMVTKM----------TRSF
        LMR QFLP +++QLLYQQY+ YRQG ++I +Y E +  L ++ NL + E  ++ARY  GLR  IQD++    +  L+ A+ +V K+          T SF
Subjt:  LMREQFLPTNFDQLLYQQYKRYRQGFKTIVDYIEAFLLLKARTNLVEIEDYKIARYFDGLREDIQDQMDSQPINLLTDAITMVTKM----------TRSF

Query:  CGLLFVAQHGTNLQLR-NLLHLT--------------------------LVGHLSNECPQRRALALIDEEDNLEPDLELIVEDDPTYVKLDE
              A  GT   ++ NL H+                             GH SNECP RR++ ++D ED L  + +   E++   VK DE
Subjt:  CGLLFVAQHGTNLQLR-NLLHLT--------------------------LVGHLSNECPQRRALALIDEEDNLEPDLELIVEDDPTYVKLDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATGCCTTATGCGTGAGCAATTCTTGCCTACCAATTTCGATCAACTTTTGTATCAACAATACAAGAGGTATCGACAAGGCTTCAAGACTATCGTAGATTACATAGA
AGCTTTCCTTCTTCTCAAAGCCCGTACCAATCTGGTAGAAATAGAGGACTACAAAATTGCTCGGTATTTCGACGGGCTTCGTGAAGATATTCAAGACCAAATGGACTCAC
AACCTATCAACCTTCTCACAGATGCTATCACCATGGTCACAAAGATGACAAGAAGCTTCTGCGGACTCCTGTTCGTCGCACAACATGGGACAAACCTTCAACTTCGAAAT
CTACTCCATCTAACTTTGGTAGGACATTTGTCCAATGAGTGTCCCCAACGACGTGCTCTGGCGCTAATCGATGAAGAAGATAATCTGGAACCAGATTTGGAACTTATTGT
TGAAGATGATCCAACATACGTAAAACTCGATGAAGAAACTTGTCACTACTTTGCTCCTCAAGGTGGATCCTCATCCCATTCCATACAAGGTCTCTTGGATAAGGAAAGGT
GGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTATGCCTTATGCGTGAGCAATTCTTGCCTACCAATTTCGATCAACTTTTGTATCAACAATACAAGAGGTATCGACAAGGCTTCAAGACTATCGTAGATTACATAGA
AGCTTTCCTTCTTCTCAAAGCCCGTACCAATCTGGTAGAAATAGAGGACTACAAAATTGCTCGGTATTTCGACGGGCTTCGTGAAGATATTCAAGACCAAATGGACTCAC
AACCTATCAACCTTCTCACAGATGCTATCACCATGGTCACAAAGATGACAAGAAGCTTCTGCGGACTCCTGTTCGTCGCACAACATGGGACAAACCTTCAACTTCGAAAT
CTACTCCATCTAACTTTGGTAGGACATTTGTCCAATGAGTGTCCCCAACGACGTGCTCTGGCGCTAATCGATGAAGAAGATAATCTGGAACCAGATTTGGAACTTATTGT
TGAAGATGATCCAACATACGTAAAACTCGATGAAGAAACTTGTCACTACTTTGCTCCTCAAGGTGGATCCTCATCCCATTCCATACAAGGTCTCTTGGATAAGGAAAGGT
GGTGA
Protein sequenceShow/hide protein sequence
MLCLMREQFLPTNFDQLLYQQYKRYRQGFKTIVDYIEAFLLLKARTNLVEIEDYKIARYFDGLREDIQDQMDSQPINLLTDAITMVTKMTRSFCGLLFVAQHGTNLQLRN
LLHLTLVGHLSNECPQRRALALIDEEDNLEPDLELIVEDDPTYVKLDEETCHYFAPQGGSSSHSIQGLLDKERW