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Moc01g14890 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g14890
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationchr1:9306555..9308185
RNA-Seq ExpressionMoc01g14890
SyntenyMoc01g14890
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154400.1 uncharacterized protein LOC111021677 [Momordica charantia]3.1e-6882.53Show/hide
Query:  MQKSDLQYSLRSLVATQSNQSTGACFMLR------TVDLNARTCTCMEFQYMGIPCSHAIAAARHKNINCHTLIDPCYSVDSLIGAYAEPILPVGHMSEW
        MQKSDLQYSLRSLVATQSNQSTGACFMLR      TVDLNARTCTCMEFQYMGIPCSHAIAAARHKNINCHTLIDPCYSVDSLI AYAEPILPVGHMSEW
Subjt:  MQKSDLQYSLRSLVATQSNQSTGACFMLR------TVDLNARTCTCMEFQYMGIPCSHAIAAARHKNINCHTLIDPCYSVDSLIGAYAEPILPVGHMSEW

Query:  KRPADYQPIPVQPPRLVKRTGRRRTQWIASTGERHGVNKCSRCEANMSTSYESDGSSSDEATSPIS
        KRPADYQPIPVQPPRLVKR GRRRTQWIASTGER  VNKCSRC         + G +    T+PI+
Subjt:  KRPADYQPIPVQPPRLVKRTGRRRTQWIASTGERHGVNKCSRCEANMSTSYESDGSSSDEATSPIS

XP_022155370.1 uncharacterized protein LOC111022514 [Momordica charantia]1.8e-5262.43Show/hide
Query:  ANCYRDGSTKEGFTGPPKTPLIQTMQKSDLQYSLRSLVATQSNQSTGACFMLRTVDLNARTCTCMEFQYMGIPCSHAIAAARHKNINCHTLIDPCYSVDS
        A CY+ G   E  T    T    + +KS  +Y+++ +     +   G   +  TVDLNARTCTCMEFQYMGIPCSHAIA ARHKNINCHTLIDPCYSVDS
Subjt:  ANCYRDGSTKEGFTGPPKTPLIQTMQKSDLQYSLRSLVATQSNQSTGACFMLRTVDLNARTCTCMEFQYMGIPCSHAIAAARHKNINCHTLIDPCYSVDS

Query:  LIGAYAEPILPVGHMSEWKRPADYQPIPVQPPRLVKRTGRRRTQWIASTGERHGVNKCSRCEANMSTSYESDGSSSDEATSPISNHPSS
        LIGAYAEPILPVGHMSEWKRPADYQPIP+QPPRLVKR GRRRTQ IASTGER  VNKCSRC         + G +    T+PI+   +S
Subjt:  LIGAYAEPILPVGHMSEWKRPADYQPIPVQPPRLVKRTGRRRTQWIASTGERHGVNKCSRCEANMSTSYESDGSSSDEATSPISNHPSS

XP_022156308.1 uncharacterized protein LOC111023235 [Momordica charantia]1.2e-5180.3Show/hide
Query:  RTVDLNARTCTCMEFQYMGIPCSHAIAAARHKNINCHTLIDPCYSVDSLIGAYAEPILPVGHMSEWKRPADYQPIPVQPPRLVKRTGRRRTQWIASTGER
        RTVDLNARTCTCMEFQYMGIPCSHAIAAARHKNINCHTLIDPCY+VDSLIGAYAEPILPVGHMSEWKRPADYQPIPVQPP LVKR GR RTQ IASTGER
Subjt:  RTVDLNARTCTCMEFQYMGIPCSHAIAAARHKNINCHTLIDPCYSVDSLIGAYAEPILPVGHMSEWKRPADYQPIPVQPPRLVKRTGRRRTQWIASTGER

Query:  HGVNKCSRCEANMSTSYESDGSSSDEATSPIS
          VNKCSRC         + G +    T+PI+
Subjt:  HGVNKCSRCEANMSTSYESDGSSSDEATSPIS

XP_022157996.1 uncharacterized protein LOC111024593 [Momordica charantia]1.5e-4966.67Show/hide
Query:  ANCYRDGSTKEGFTGPPKTPLIQTMQKSDLQYSLRSLVATQSNQSTGACFMLRTVDLNARTCTCMEFQYMGIPCSHAIAAARHKNINCHTLIDPCYSVDS
        A CY+ G   E  T    T   ++ +KS  +Y+++S+     +   G   +    DLNARTCTCMEFQYMGIPCSHAIA ARHKNINCHTLIDPCYSVDS
Subjt:  ANCYRDGSTKEGFTGPPKTPLIQTMQKSDLQYSLRSLVATQSNQSTGACFMLRTVDLNARTCTCMEFQYMGIPCSHAIAAARHKNINCHTLIDPCYSVDS

Query:  LIGAYAEPILPVGHMSEWKRPADYQPIPVQPPRLVKRTGRRRTQWIASTGERHGVNKCS
        LIGAYAEPILPVGHMSEWKRP DYQPIP+QPP LVK  GRRRTQ I STGER  VNKCS
Subjt:  LIGAYAEPILPVGHMSEWKRPADYQPIPVQPPRLVKRTGRRRTQWIASTGERHGVNKCS

XP_022159086.1 uncharacterized protein LOC111025530 [Momordica charantia]2.9e-5078.63Show/hide
Query:  TVDLNARTCTCMEFQYMGIPCSHAIAAARHKNINCHTLIDPCYSVDSLIGAYAEPILPVGHMSEWKRPADYQPIPVQPPRLVKRTGRRRTQWIASTGERH
        TVDLNARTCTCMEFQYMGIPCSHAIAAARHKNINCHTLIDPCYSVDSLI AYAEPILP+GHMSEWKRPA+YQ IPVQPP LVKR GRRRTQ IASTGER 
Subjt:  TVDLNARTCTCMEFQYMGIPCSHAIAAARHKNINCHTLIDPCYSVDSLIGAYAEPILPVGHMSEWKRPADYQPIPVQPPRLVKRTGRRRTQWIASTGERH

Query:  GVNKCSRCEANMSTSYESDGSSSDEATSPIS
         VNKCSRC         + G +    T+PI+
Subjt:  GVNKCSRCEANMSTSYESDGSSSDEATSPIS

TrEMBL top hitse value%identityAlignment
A0A6J1DJH9 uncharacterized protein LOC1110216771.5e-6882.53Show/hide
Query:  MQKSDLQYSLRSLVATQSNQSTGACFMLR------TVDLNARTCTCMEFQYMGIPCSHAIAAARHKNINCHTLIDPCYSVDSLIGAYAEPILPVGHMSEW
        MQKSDLQYSLRSLVATQSNQSTGACFMLR      TVDLNARTCTCMEFQYMGIPCSHAIAAARHKNINCHTLIDPCYSVDSLI AYAEPILPVGHMSEW
Subjt:  MQKSDLQYSLRSLVATQSNQSTGACFMLR------TVDLNARTCTCMEFQYMGIPCSHAIAAARHKNINCHTLIDPCYSVDSLIGAYAEPILPVGHMSEW

Query:  KRPADYQPIPVQPPRLVKRTGRRRTQWIASTGERHGVNKCSRCEANMSTSYESDGSSSDEATSPIS
        KRPADYQPIPVQPPRLVKR GRRRTQWIASTGER  VNKCSRC         + G +    T+PI+
Subjt:  KRPADYQPIPVQPPRLVKRTGRRRTQWIASTGERHGVNKCSRCEANMSTSYESDGSSSDEATSPIS

A0A6J1DMA3 uncharacterized protein LOC1110225148.9e-5362.43Show/hide
Query:  ANCYRDGSTKEGFTGPPKTPLIQTMQKSDLQYSLRSLVATQSNQSTGACFMLRTVDLNARTCTCMEFQYMGIPCSHAIAAARHKNINCHTLIDPCYSVDS
        A CY+ G   E  T    T    + +KS  +Y+++ +     +   G   +  TVDLNARTCTCMEFQYMGIPCSHAIA ARHKNINCHTLIDPCYSVDS
Subjt:  ANCYRDGSTKEGFTGPPKTPLIQTMQKSDLQYSLRSLVATQSNQSTGACFMLRTVDLNARTCTCMEFQYMGIPCSHAIAAARHKNINCHTLIDPCYSVDS

Query:  LIGAYAEPILPVGHMSEWKRPADYQPIPVQPPRLVKRTGRRRTQWIASTGERHGVNKCSRCEANMSTSYESDGSSSDEATSPISNHPSS
        LIGAYAEPILPVGHMSEWKRPADYQPIP+QPPRLVKR GRRRTQ IASTGER  VNKCSRC         + G +    T+PI+   +S
Subjt:  LIGAYAEPILPVGHMSEWKRPADYQPIPVQPPRLVKRTGRRRTQWIASTGERHGVNKCSRCEANMSTSYESDGSSSDEATSPISNHPSS

A0A6J1DQ99 uncharacterized protein LOC1110232355.8e-5280.3Show/hide
Query:  RTVDLNARTCTCMEFQYMGIPCSHAIAAARHKNINCHTLIDPCYSVDSLIGAYAEPILPVGHMSEWKRPADYQPIPVQPPRLVKRTGRRRTQWIASTGER
        RTVDLNARTCTCMEFQYMGIPCSHAIAAARHKNINCHTLIDPCY+VDSLIGAYAEPILPVGHMSEWKRPADYQPIPVQPP LVKR GR RTQ IASTGER
Subjt:  RTVDLNARTCTCMEFQYMGIPCSHAIAAARHKNINCHTLIDPCYSVDSLIGAYAEPILPVGHMSEWKRPADYQPIPVQPPRLVKRTGRRRTQWIASTGER

Query:  HGVNKCSRCEANMSTSYESDGSSSDEATSPIS
          VNKCSRC         + G +    T+PI+
Subjt:  HGVNKCSRCEANMSTSYESDGSSSDEATSPIS

A0A6J1DZQ9 uncharacterized protein LOC1110245937.0e-5066.67Show/hide
Query:  ANCYRDGSTKEGFTGPPKTPLIQTMQKSDLQYSLRSLVATQSNQSTGACFMLRTVDLNARTCTCMEFQYMGIPCSHAIAAARHKNINCHTLIDPCYSVDS
        A CY+ G   E  T    T   ++ +KS  +Y+++S+     +   G   +    DLNARTCTCMEFQYMGIPCSHAIA ARHKNINCHTLIDPCYSVDS
Subjt:  ANCYRDGSTKEGFTGPPKTPLIQTMQKSDLQYSLRSLVATQSNQSTGACFMLRTVDLNARTCTCMEFQYMGIPCSHAIAAARHKNINCHTLIDPCYSVDS

Query:  LIGAYAEPILPVGHMSEWKRPADYQPIPVQPPRLVKRTGRRRTQWIASTGERHGVNKCS
        LIGAYAEPILPVGHMSEWKRP DYQPIP+QPP LVK  GRRRTQ I STGER  VNKCS
Subjt:  LIGAYAEPILPVGHMSEWKRPADYQPIPVQPPRLVKRTGRRRTQWIASTGERHGVNKCS

A0A6J1E2V3 uncharacterized protein LOC1110255301.4e-5078.63Show/hide
Query:  TVDLNARTCTCMEFQYMGIPCSHAIAAARHKNINCHTLIDPCYSVDSLIGAYAEPILPVGHMSEWKRPADYQPIPVQPPRLVKRTGRRRTQWIASTGERH
        TVDLNARTCTCMEFQYMGIPCSHAIAAARHKNINCHTLIDPCYSVDSLI AYAEPILP+GHMSEWKRPA+YQ IPVQPP LVKR GRRRTQ IASTGER 
Subjt:  TVDLNARTCTCMEFQYMGIPCSHAIAAARHKNINCHTLIDPCYSVDSLIGAYAEPILPVGHMSEWKRPADYQPIPVQPPRLVKRTGRRRTQWIASTGERH

Query:  GVNKCSRCEANMSTSYESDGSSSDEATSPIS
         VNKCSRC         + G +    T+PI+
Subjt:  GVNKCSRCEANMSTSYESDGSSSDEATSPIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCTCCTTCGAGAGGCTAGAGAGTTACCTATCACTAAGATTGTCGAGTTCATCCGCGAATTGCTACAGAGATGGTTCCACGAAAGAAGGATTCACTGGTCCACCCAA
AACACCTCTCATTCAGACTATGCAGAAGAGCGACTTGCAGTACAGTTTGAGAAGTCTCGTCGCTACACAGTCAAACCAGTCGACTGGTGCATGTTTCATGTTGAGGACGG
TTGATTTGAATGCCCGTACATGTACATGCATGGAGTTCCAGTACATGGGCATTCCATGTTCGCACGCAATTGCAGCAGCGAGGCACAAGAATATAAATTGCCACACGTTG
ATCGATCCATGCTACAGTGTGGACTCCCTAATTGGTGCCTACGCCGAACCAATCTTACCGGTAGGCCACATGTCGGAATGGAAAAGGCCAGCTGATTACCAGCCTATTCC
CGTCCAACCACCACGTCTTGTTAAACGTACAGGCCGGCGTAGAACGCAATGGATCGCCTCAACCGGTGAGCGTCATGGTGTGAACAAGTGTTCTCGATGCGAAGCAAACA
TGTCAACATCTTACGAGTCGGACGGTTCCTCTTCCGATGAAGCAACCAGTCCTATCTCAAACCATCCCTCCTCCTTCGCGGAGAACGGAGTGCCAATTAACGGTCCTCTT
CAACAAGCACGGGAAGAAAACGGCCAGCTCAGGAGAGAGCTATGTCGAACGCAACACGAGCTCTACAACATGAGGTATAAGTTAGCCCGAGTTGAAGAAACGCAGGACTT
GCTGGAGGGACTGCTGAAGGAGGAGAAGGAGGAACGACTTCGTCTGGAGGACAGGGTGGATCAGTTACTGGCCCGTCTACGCCGATACCGTAATAATAATAATAATTTGT
AA
mRNA sequenceShow/hide mRNA sequence
ATGCCCTCCTTCGAGAGGCTAGAGAGTTACCTATCACTAAGATTGTCGAGTTCATCCGCGAATTGCTACAGAGATGGTTCCACGAAAGAAGGATTCACTGGTCCACCCAA
AACACCTCTCATTCAGACTATGCAGAAGAGCGACTTGCAGTACAGTTTGAGAAGTCTCGTCGCTACACAGTCAAACCAGTCGACTGGTGCATGTTTCATGTTGAGGACGG
TTGATTTGAATGCCCGTACATGTACATGCATGGAGTTCCAGTACATGGGCATTCCATGTTCGCACGCAATTGCAGCAGCGAGGCACAAGAATATAAATTGCCACACGTTG
ATCGATCCATGCTACAGTGTGGACTCCCTAATTGGTGCCTACGCCGAACCAATCTTACCGGTAGGCCACATGTCGGAATGGAAAAGGCCAGCTGATTACCAGCCTATTCC
CGTCCAACCACCACGTCTTGTTAAACGTACAGGCCGGCGTAGAACGCAATGGATCGCCTCAACCGGTGAGCGTCATGGTGTGAACAAGTGTTCTCGATGCGAAGCAAACA
TGTCAACATCTTACGAGTCGGACGGTTCCTCTTCCGATGAAGCAACCAGTCCTATCTCAAACCATCCCTCCTCCTTCGCGGAGAACGGAGTGCCAATTAACGGTCCTCTT
CAACAAGCACGGGAAGAAAACGGCCAGCTCAGGAGAGAGCTATGTCGAACGCAACACGAGCTCTACAACATGAGGTATAAGTTAGCCCGAGTTGAAGAAACGCAGGACTT
GCTGGAGGGACTGCTGAAGGAGGAGAAGGAGGAACGACTTCGTCTGGAGGACAGGGTGGATCAGTTACTGGCCCGTCTACGCCGATACCGTAATAATAATAATAATTTGT
AA
Protein sequenceShow/hide protein sequence
MPSFERLESYLSLRLSSSSANCYRDGSTKEGFTGPPKTPLIQTMQKSDLQYSLRSLVATQSNQSTGACFMLRTVDLNARTCTCMEFQYMGIPCSHAIAAARHKNINCHTL
IDPCYSVDSLIGAYAEPILPVGHMSEWKRPADYQPIPVQPPRLVKRTGRRRTQWIASTGERHGVNKCSRCEANMSTSYESDGSSSDEATSPISNHPSSFAENGVPINGPL
QQAREENGQLRRELCRTQHELYNMRYKLARVEETQDLLEGLLKEEKEERLRLEDRVDQLLARLRRYRNNNNNL