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Moc01g14980 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g14980
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr1:9348256..9348996
RNA-Seq ExpressionMoc01g14980
SyntenyMoc01g14980
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032849.1 reverse transcriptase [Cucumis melo var. makuwa]1.2e-4457.22Show/hide
Query:  IRDYMKQFAGLMLDIRDMSEKDKVFYFVEDLKPWAKSKLYDQGVQDLSSAYAAIESLFDLNNDQSQDHRRNQPSSSSGNKTTRTSSPKSEGGDRNGGADR
        IR+Y+KQFAGLMLDIRDMSEKDKVF FVE LKPWAK+KLY+Q VQDL+SAYAA E LFDL+ND SQD RR+  SSS G++  R SSPK+ GGDR    DR
Subjt:  IRDYMKQFAGLMLDIRDMSEKDKVFYFVEDLKPWAKSKLYDQGVQDLSSAYAAIESLFDLNNDQSQDHRRNQPSSSSGNKTTRTSSPKSEGGDRNGGADR

Query:  RPYQRGRTN-WHGPNQQNNFNRGALVCFLYKEAYRVSDCPHQAALKALQATIANGPEVETEATETDIPTEEPTDNPHMGALKFLSAI
        R YQ    N W G N QN  NR  L CF+ K  +   +CP++ A  A QA++ +  + +   TE ++   E  DNP MGALKFLS++
Subjt:  RPYQRGRTN-WHGPNQQNNFNRGALVCFLYKEAYRVSDCPHQAALKALQATIANGPEVETEATETDIPTEEPTDNPHMGALKFLSAI

KAA0060348.1 reverse transcriptase [Cucumis melo var. makuwa]2.4e-4856.5Show/hide
Query:  MHLAEDAKLWWRYIRDYMKQFAGLMLDIRDMSEKDKVFYFVEDLKPWAKSKLYDQGVQDLSSAYAAIESLFDLNNDQSQDHRRNQPSSSSGNKTTRTSSP
        MHL+EDAKLWW  IR+Y+KQFAGLMLDIRDMSEKDKVF FV+ LKPWAK+KLY+Q VQDL+SAYAA E LFDL+ND  QD RR+  SSS G++  R SSP
Subjt:  MHLAEDAKLWWRYIRDYMKQFAGLMLDIRDMSEKDKVFYFVEDLKPWAKSKLYDQGVQDLSSAYAAIESLFDLNNDQSQDHRRNQPSSSSGNKTTRTSSP

Query:  KSEGGDRNGGADRRPYQRGRTN-WHGPNQQNNFNRGALVCFLYKEAYRVSDCPHQAALKALQATIANGPEVETEATETDIPTEEPTDNPHMGALKFLSAI
        K+ GGDR    DRR +Q    N W GP+ QN  NR  L CF+ K  +   +C ++ A  A QA++A+  + +   TE ++   E  DNP MGALK LS++
Subjt:  KSEGGDRNGGADRRPYQRGRTN-WHGPNQQNNFNRGALVCFLYKEAYRVSDCPHQAALKALQATIANGPEVETEATETDIPTEEPTDNPHMGALKFLSAI

TYK07954.1 reverse transcriptase [Cucumis melo var. makuwa]1.2e-4457.22Show/hide
Query:  IRDYMKQFAGLMLDIRDMSEKDKVFYFVEDLKPWAKSKLYDQGVQDLSSAYAAIESLFDLNNDQSQDHRRNQPSSSSGNKTTRTSSPKSEGGDRNGGADR
        IR+Y+KQFAGLMLDIRDMSEKDKVF FVE LKPWAK+KLY+Q VQDL+SAYAA E LFDL+ND SQD RR+  SSS G++  R SSPK+ GGDR    DR
Subjt:  IRDYMKQFAGLMLDIRDMSEKDKVFYFVEDLKPWAKSKLYDQGVQDLSSAYAAIESLFDLNNDQSQDHRRNQPSSSSGNKTTRTSSPKSEGGDRNGGADR

Query:  RPYQRGRTN-WHGPNQQNNFNRGALVCFLYKEAYRVSDCPHQAALKALQATIANGPEVETEATETDIPTEEPTDNPHMGALKFLSAI
        R +Q    N W GP+ QN  NR  L CF+ K  +   +CP++ A  A QA++A+  + +   TE +    E  DNP MGALKFLS++
Subjt:  RPYQRGRTN-WHGPNQQNNFNRGALVCFLYKEAYRVSDCPHQAALKALQATIANGPEVETEATETDIPTEEPTDNPHMGALKFLSAI

TYK22097.1 reverse transcriptase [Cucumis melo var. makuwa]2.4e-4856.5Show/hide
Query:  MHLAEDAKLWWRYIRDYMKQFAGLMLDIRDMSEKDKVFYFVEDLKPWAKSKLYDQGVQDLSSAYAAIESLFDLNNDQSQDHRRNQPSSSSGNKTTRTSSP
        MHL+EDAKLWW  IR+Y+KQFAGLMLDIRDMSEKDKVF FV+ LKPWAK+KLY+Q VQDL+SAYAA E LFDL+ND  QD RR+  SSS G++  R SSP
Subjt:  MHLAEDAKLWWRYIRDYMKQFAGLMLDIRDMSEKDKVFYFVEDLKPWAKSKLYDQGVQDLSSAYAAIESLFDLNNDQSQDHRRNQPSSSSGNKTTRTSSP

Query:  KSEGGDRNGGADRRPYQRGRTN-WHGPNQQNNFNRGALVCFLYKEAYRVSDCPHQAALKALQATIANGPEVETEATETDIPTEEPTDNPHMGALKFLSAI
        K+ GGDR    DRR +Q    N W GP+ QN  NR  L CF+ K  +   +C ++ A  A QA++A+  + +   TE ++   E  DNP MGALK LS++
Subjt:  KSEGGDRNGGADRRPYQRGRTN-WHGPNQQNNFNRGALVCFLYKEAYRVSDCPHQAALKALQATIANGPEVETEATETDIPTEEPTDNPHMGALKFLSAI

XP_022155185.1 uncharacterized protein LOC111022320 [Momordica charantia]3.2e-5652.54Show/hide
Query:  MHLAEDAKLWWR------------------------------------YIRDYMKQFAGLMLDIRDMSEKDKVFYFVEDLKPWAKSKLYDQGVQDLSSAY
        MHLA+DAKLWWR                                     IRDY+KQF+GLMLDIRDMSEKDKVF FVE LKPWA++KLY+Q VQD+ +AY
Subjt:  MHLAEDAKLWWR------------------------------------YIRDYMKQFAGLMLDIRDMSEKDKVFYFVEDLKPWAKSKLYDQGVQDLSSAY

Query:  AAIESLFDLNNDQSQDHRRNQPSSSSGNKTTRTSSPKSEGGDRNGGADRRPY-QRGRTNWHGPNQQNNFNRGALVCFLYKEAYRVSDCPHQAALKALQAT
        A  E LF+L++D SQ+ R+ Q SSSSG++  R+ SPK+ G D+NGG DRRP+ QRG   W GPN  NN NR    CF+ K  +RV +CP++AAL+A QAT
Subjt:  AAIESLFDLNNDQSQDHRRNQPSSSSGNKTTRTSSPKSEGGDRNGGADRRPY-QRGRTNWHGPNQQNNFNRGALVCFLYKEAYRVSDCPHQAALKALQAT

Query:  IANGPEVETEATETDIPTEEPTDNPHMGALKFLSAI
        + N   +E E  ETD P E+  DNP MGALKFLSA+
Subjt:  IANGPEVETEATETDIPTEEPTDNPHMGALKFLSAI

TrEMBL top hitse value%identityAlignment
A0A5A7SUK4 Reverse transcriptase6.0e-4557.22Show/hide
Query:  IRDYMKQFAGLMLDIRDMSEKDKVFYFVEDLKPWAKSKLYDQGVQDLSSAYAAIESLFDLNNDQSQDHRRNQPSSSSGNKTTRTSSPKSEGGDRNGGADR
        IR+Y+KQFAGLMLDIRDMSEKDKVF FVE LKPWAK+KLY+Q VQDL+SAYAA E LFDL+ND SQD RR+  SSS G++  R SSPK+ GGDR    DR
Subjt:  IRDYMKQFAGLMLDIRDMSEKDKVFYFVEDLKPWAKSKLYDQGVQDLSSAYAAIESLFDLNNDQSQDHRRNQPSSSSGNKTTRTSSPKSEGGDRNGGADR

Query:  RPYQRGRTN-WHGPNQQNNFNRGALVCFLYKEAYRVSDCPHQAALKALQATIANGPEVETEATETDIPTEEPTDNPHMGALKFLSAI
        R YQ    N W G N QN  NR  L CF+ K  +   +CP++ A  A QA++ +  + +   TE ++   E  DNP MGALKFLS++
Subjt:  RPYQRGRTN-WHGPNQQNNFNRGALVCFLYKEAYRVSDCPHQAALKALQATIANGPEVETEATETDIPTEEPTDNPHMGALKFLSAI

A0A5A7UYM0 Reverse transcriptase1.2e-4856.5Show/hide
Query:  MHLAEDAKLWWRYIRDYMKQFAGLMLDIRDMSEKDKVFYFVEDLKPWAKSKLYDQGVQDLSSAYAAIESLFDLNNDQSQDHRRNQPSSSSGNKTTRTSSP
        MHL+EDAKLWW  IR+Y+KQFAGLMLDIRDMSEKDKVF FV+ LKPWAK+KLY+Q VQDL+SAYAA E LFDL+ND  QD RR+  SSS G++  R SSP
Subjt:  MHLAEDAKLWWRYIRDYMKQFAGLMLDIRDMSEKDKVFYFVEDLKPWAKSKLYDQGVQDLSSAYAAIESLFDLNNDQSQDHRRNQPSSSSGNKTTRTSSP

Query:  KSEGGDRNGGADRRPYQRGRTN-WHGPNQQNNFNRGALVCFLYKEAYRVSDCPHQAALKALQATIANGPEVETEATETDIPTEEPTDNPHMGALKFLSAI
        K+ GGDR    DRR +Q    N W GP+ QN  NR  L CF+ K  +   +C ++ A  A QA++A+  + +   TE ++   E  DNP MGALK LS++
Subjt:  KSEGGDRNGGADRRPYQRGRTN-WHGPNQQNNFNRGALVCFLYKEAYRVSDCPHQAALKALQATIANGPEVETEATETDIPTEEPTDNPHMGALKFLSAI

A0A5D3C9P8 Reverse transcriptase6.0e-4557.22Show/hide
Query:  IRDYMKQFAGLMLDIRDMSEKDKVFYFVEDLKPWAKSKLYDQGVQDLSSAYAAIESLFDLNNDQSQDHRRNQPSSSSGNKTTRTSSPKSEGGDRNGGADR
        IR+Y+KQFAGLMLDIRDMSEKDKVF FVE LKPWAK+KLY+Q VQDL+SAYAA E LFDL+ND SQD RR+  SSS G++  R SSPK+ GGDR    DR
Subjt:  IRDYMKQFAGLMLDIRDMSEKDKVFYFVEDLKPWAKSKLYDQGVQDLSSAYAAIESLFDLNNDQSQDHRRNQPSSSSGNKTTRTSSPKSEGGDRNGGADR

Query:  RPYQRGRTN-WHGPNQQNNFNRGALVCFLYKEAYRVSDCPHQAALKALQATIANGPEVETEATETDIPTEEPTDNPHMGALKFLSAI
        R +Q    N W GP+ QN  NR  L CF+ K  +   +CP++ A  A QA++A+  + +   TE +    E  DNP MGALKFLS++
Subjt:  RPYQRGRTN-WHGPNQQNNFNRGALVCFLYKEAYRVSDCPHQAALKALQATIANGPEVETEATETDIPTEEPTDNPHMGALKFLSAI

A0A5D3DEJ3 Reverse transcriptase1.2e-4856.5Show/hide
Query:  MHLAEDAKLWWRYIRDYMKQFAGLMLDIRDMSEKDKVFYFVEDLKPWAKSKLYDQGVQDLSSAYAAIESLFDLNNDQSQDHRRNQPSSSSGNKTTRTSSP
        MHL+EDAKLWW  IR+Y+KQFAGLMLDIRDMSEKDKVF FV+ LKPWAK+KLY+Q VQDL+SAYAA E LFDL+ND  QD RR+  SSS G++  R SSP
Subjt:  MHLAEDAKLWWRYIRDYMKQFAGLMLDIRDMSEKDKVFYFVEDLKPWAKSKLYDQGVQDLSSAYAAIESLFDLNNDQSQDHRRNQPSSSSGNKTTRTSSP

Query:  KSEGGDRNGGADRRPYQRGRTN-WHGPNQQNNFNRGALVCFLYKEAYRVSDCPHQAALKALQATIANGPEVETEATETDIPTEEPTDNPHMGALKFLSAI
        K+ GGDR    DRR +Q    N W GP+ QN  NR  L CF+ K  +   +C ++ A  A QA++A+  + +   TE ++   E  DNP MGALK LS++
Subjt:  KSEGGDRNGGADRRPYQRGRTN-WHGPNQQNNFNRGALVCFLYKEAYRVSDCPHQAALKALQATIANGPEVETEATETDIPTEEPTDNPHMGALKFLSAI

A0A6J1DLQ6 uncharacterized protein LOC1110223201.5e-5652.54Show/hide
Query:  MHLAEDAKLWWR------------------------------------YIRDYMKQFAGLMLDIRDMSEKDKVFYFVEDLKPWAKSKLYDQGVQDLSSAY
        MHLA+DAKLWWR                                     IRDY+KQF+GLMLDIRDMSEKDKVF FVE LKPWA++KLY+Q VQD+ +AY
Subjt:  MHLAEDAKLWWR------------------------------------YIRDYMKQFAGLMLDIRDMSEKDKVFYFVEDLKPWAKSKLYDQGVQDLSSAY

Query:  AAIESLFDLNNDQSQDHRRNQPSSSSGNKTTRTSSPKSEGGDRNGGADRRPY-QRGRTNWHGPNQQNNFNRGALVCFLYKEAYRVSDCPHQAALKALQAT
        A  E LF+L++D SQ+ R+ Q SSSSG++  R+ SPK+ G D+NGG DRRP+ QRG   W GPN  NN NR    CF+ K  +RV +CP++AAL+A QAT
Subjt:  AAIESLFDLNNDQSQDHRRNQPSSSSGNKTTRTSSPKSEGGDRNGGADRRPY-QRGRTNWHGPNQQNNFNRGALVCFLYKEAYRVSDCPHQAALKALQAT

Query:  IANGPEVETEATETDIPTEEPTDNPHMGALKFLSAI
        + N   +E E  ETD P E+  DNP MGALKFLSA+
Subjt:  IANGPEVETEATETDIPTEEPTDNPHMGALKFLSAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCTAGCGGAAGATGCAAAGCTTTGGTGGAGGTACATCAGAGACTACATGAAACAGTTCGCGGGGCTGATGTTAGACATACGAGACATGTCAGAGAAAGACAAAGT
CTTCTACTTCGTGGAAGACTTGAAACCATGGGCCAAGTCCAAGTTGTATGATCAAGGGGTTCAAGACCTTAGCTCTGCTTATGCTGCGATTGAAAGCCTGTTTGATCTTA
ATAACGATCAGTCTCAAGACCACAGAAGGAATCAACCCTCCTCGAGTAGTGGGAACAAAACCACCAGAACAAGCTCCCCCAAAAGTGAGGGAGGAGACAGGAACGGAGGA
GCAGACCGCAGACCCTATCAGAGGGGTAGAACCAACTGGCATGGGCCAAACCAACAAAACAACTTCAATCGAGGGGCCCTCGTTTGCTTCCTATATAAAGAGGCTTATCG
CGTAAGCGATTGCCCGCATCAAGCTGCCCTGAAGGCACTCCAAGCTACAATAGCCAATGGTCCTGAGGTTGAGACAGAAGCTACCGAGACAGACATACCGACCGAAGAGC
CTACTGATAACCCCCACATGGGGGCACTGAAATTCCTGTCGGCCATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCATCTAGCGGAAGATGCAAAGCTTTGGTGGAGGTACATCAGAGACTACATGAAACAGTTCGCGGGGCTGATGTTAGACATACGAGACATGTCAGAGAAAGACAAAGT
CTTCTACTTCGTGGAAGACTTGAAACCATGGGCCAAGTCCAAGTTGTATGATCAAGGGGTTCAAGACCTTAGCTCTGCTTATGCTGCGATTGAAAGCCTGTTTGATCTTA
ATAACGATCAGTCTCAAGACCACAGAAGGAATCAACCCTCCTCGAGTAGTGGGAACAAAACCACCAGAACAAGCTCCCCCAAAAGTGAGGGAGGAGACAGGAACGGAGGA
GCAGACCGCAGACCCTATCAGAGGGGTAGAACCAACTGGCATGGGCCAAACCAACAAAACAACTTCAATCGAGGGGCCCTCGTTTGCTTCCTATATAAAGAGGCTTATCG
CGTAAGCGATTGCCCGCATCAAGCTGCCCTGAAGGCACTCCAAGCTACAATAGCCAATGGTCCTGAGGTTGAGACAGAAGCTACCGAGACAGACATACCGACCGAAGAGC
CTACTGATAACCCCCACATGGGGGCACTGAAATTCCTGTCGGCCATCTAG
Protein sequenceShow/hide protein sequence
MHLAEDAKLWWRYIRDYMKQFAGLMLDIRDMSEKDKVFYFVEDLKPWAKSKLYDQGVQDLSSAYAAIESLFDLNNDQSQDHRRNQPSSSSGNKTTRTSSPKSEGGDRNGG
ADRRPYQRGRTNWHGPNQQNNFNRGALVCFLYKEAYRVSDCPHQAALKALQATIANGPEVETEATETDIPTEEPTDNPHMGALKFLSAI