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Moc01g15320 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g15320
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr1:9645837..9646186
RNA-Seq ExpressionMoc01g15320
SyntenyMoc01g15320
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148138.1 uncharacterized protein LOC111016891 [Momordica charantia]1.6e-1595.45Show/hide
Query:  QCDGWLVDSGCTNHITSDKELFKDLDKSFKSRVKIGNGEYLEVK
        QCDGWLVDSGCTNH+TSDKELFKDLDKSFKSRVKI NGEYLEVK
Subjt:  QCDGWLVDSGCTNHITSDKELFKDLDKSFKSRVKIGNGEYLEVK

XP_022151646.1 uncharacterized protein LOC111019554 [Momordica charantia]3.5e-1589.13Show/hide
Query:  ATQCDGWLVDSGCTNHITSDKELFKDLDKSFKSRVKIGNGEYLEVK
        A QCDGWLVDSGCTNH+TSD  LFKDLDKSFKSRVKIGNGEYL+VK
Subjt:  ATQCDGWLVDSGCTNHITSDKELFKDLDKSFKSRVKIGNGEYLEVK

XP_038885771.1 uncharacterized protein LOC120076063 [Benincasa hispida]4.5e-1593.33Show/hide
Query:  TQCDGWLVDSGCTNHITSDKELFKDLDKSFKSRVKIGNGEYLEVK
        TQCDGWLVDSG TNH+TSDKELFKDLDKSFKSRVKIGN EYLEVK
Subjt:  TQCDGWLVDSGCTNHITSDKELFKDLDKSFKSRVKIGNGEYLEVK

XP_038889190.1 uncharacterized protein LOC120079069 [Benincasa hispida]4.1e-1687.5Show/hide
Query:  RKATQCDGWLVDSGCTNHITSDKELFKDLDKSFKSRVKIGNGEYLEVK
        R  TQCDGWLVDSGCTNH+T+DKELFKD+DKSFK RVKIGNGEYLEVK
Subjt:  RKATQCDGWLVDSGCTNHITSDKELFKDLDKSFKSRVKIGNGEYLEVK

XP_038904297.1 uncharacterized protein LOC120090652 [Benincasa hispida]7.7e-1591.11Show/hide
Query:  TQCDGWLVDSGCTNHITSDKELFKDLDKSFKSRVKIGNGEYLEVK
        TQCDGWLVDSGCTNH+TSDKELFKDLDKSFKSRVKI N EY EVK
Subjt:  TQCDGWLVDSGCTNHITSDKELFKDLDKSFKSRVKIGNGEYLEVK

TrEMBL top hitse value%identityAlignment
A0A1S3BNQ3 uncharacterized protein LOC1034918721.7e-1282.22Show/hide
Query:  TQCDGWLVDSGCTNHITSDKELFKDLDKSFKSRVKIGNGEYLEVK
        TQ DGWLVDSGCTNH+TS K+LFK+LD SFKSR+KIGNG YLEVK
Subjt:  TQCDGWLVDSGCTNHITSDKELFKDLDKSFKSRVKIGNGEYLEVK

A0A6J1D394 uncharacterized protein LOC1110168917.5e-1695.45Show/hide
Query:  QCDGWLVDSGCTNHITSDKELFKDLDKSFKSRVKIGNGEYLEVK
        QCDGWLVDSGCTNH+TSDKELFKDLDKSFKSRVKI NGEYLEVK
Subjt:  QCDGWLVDSGCTNHITSDKELFKDLDKSFKSRVKIGNGEYLEVK

A0A6J1DFA6 uncharacterized protein LOC1110195541.7e-1589.13Show/hide
Query:  ATQCDGWLVDSGCTNHITSDKELFKDLDKSFKSRVKIGNGEYLEVK
        A QCDGWLVDSGCTNH+TSD  LFKDLDKSFKSRVKIGNGEYL+VK
Subjt:  ATQCDGWLVDSGCTNHITSDKELFKDLDKSFKSRVKIGNGEYLEVK

A0A6J1DWT9 uncharacterized protein LOC1110251491.4e-1488.89Show/hide
Query:  TQCDGWLVDSGCTNHITSDKELFKDLDKSFKSRVKIGNGEYLEVK
        TQCD WLVDSGCTN + SDKELFKDLD+SFKSRVKIGNGEYLEVK
Subjt:  TQCDGWLVDSGCTNHITSDKELFKDLDKSFKSRVKIGNGEYLEVK

A0A6P4PSP3 uncharacterized protein LOC1084815773.9e-1279.07Show/hide
Query:  CDGWLVDSGCTNHITSDKELFKDLDKSFKSRVKIGNGEYLEVK
        CD WLVDSGCTNH+T D++LFKDLD+S KS+V+IGNGEYLEVK
Subjt:  CDGWLVDSGCTNHITSDKELFKDLDKSFKSRVKIGNGEYLEVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGGTAGTGCATGCAAGCACTGTGGGAAGCAGAATCATCCACACTTCAGATGCTAGGAAAGCCACTCAATGTGATGGTTGGTTGGTTGATAGTGGGTGTACCAATCA
CATAACAAGTGACAAAGAGTTGTTCAAGGACCTTGACAAGTCATTCAAGTCAAGGGTGAAGATAGGGAATGGTGAGTATCTAGAAGTGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGGTAGTGCATGCAAGCACTGTGGGAAGCAGAATCATCCACACTTCAGATGCTAGGAAAGCCACTCAATGTGATGGTTGGTTGGTTGATAGTGGGTGTACCAATCA
CATAACAAGTGACAAAGAGTTGTTCAAGGACCTTGACAAGTCATTCAAGTCAAGGGTGAAGATAGGGAATGGTGAGTATCTAGAAGTGAAGTGA
Protein sequenceShow/hide protein sequence
MLVVHASTVGSRIIHTSDARKATQCDGWLVDSGCTNHITSDKELFKDLDKSFKSRVKIGNGEYLEVK