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Moc01g15480 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g15480
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr1:9834439..9834750
RNA-Seq ExpressionMoc01g15480
SyntenyMoc01g15480
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN74341.1 hypothetical protein VITISV_043997 [Vitis vinifera]3.8e-2158.02Show/hide
Query:  MHDSKKVSVPFGKHFKLYVDDSPKSPNEIEEMHDIPYASTVGSLMYATVCTRPDLAHPLSVVGRFLANPGKLHWNAVKWII
        M+++K VS P G HFKL  + SPK+  E++ M  +PYAS +GSLMYA VCTRPD+AH + VV RF++ PGK HW AVKWI+
Subjt:  MHDSKKVSVPFGKHFKLYVDDSPKSPNEIEEMHDIPYASTVGSLMYATVCTRPDLAHPLSVVGRFLANPGKLHWNAVKWII
RVW83885.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]2.9e-2159.26Show/hide
Query:  MHDSKKVSVPFGKHFKLYVDDSPKSPNEIEEMHDIPYASTVGSLMYATVCTRPDLAHPLSVVGRFLANPGKLHWNAVKWII
        M+++K VS P G HFKL  + SPK+  E + M  +PYAST+GSLMYA VCTRPD+AH + VV RF++ PGK HW AVKWI+
Subjt:  MHDSKKVSVPFGKHFKLYVDDSPKSPNEIEEMHDIPYASTVGSLMYATVCTRPDLAHPLSVVGRFLANPGKLHWNAVKWII
RVX11927.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]3.8e-2158.02Show/hide
Query:  MHDSKKVSVPFGKHFKLYVDDSPKSPNEIEEMHDIPYASTVGSLMYATVCTRPDLAHPLSVVGRFLANPGKLHWNAVKWII
        M+++K VS P G HFKL  + SPK+  E++ M  +PYAS +GSLMYA VCTRPD+AH + VV RF++ PGK HW AVKWI+
Subjt:  MHDSKKVSVPFGKHFKLYVDDSPKSPNEIEEMHDIPYASTVGSLMYATVCTRPDLAHPLSVVGRFLANPGKLHWNAVKWII
XP_037492286.1 uncharacterized protein LOC119369668 [Jatropha curcas]2.9e-2164.2Show/hide
Query:  MHDSKKVSVPFGKHFKLYVDDSPKSPNEIEEMHDIPYASTVGSLMYATVCTRPDLAHPLSVVGRFLANPGKLHWNAVKWII
        M ++K VS P   HFKL +   P S  E EE+  IPYASTVGSLMYA VCTRPD+AH + VV RFL+NPGK HWNAVKWI+
Subjt:  MHDSKKVSVPFGKHFKLYVDDSPKSPNEIEEMHDIPYASTVGSLMYATVCTRPDLAHPLSVVGRFLANPGKLHWNAVKWII
XP_042951770.1 secreted RxLR effector protein 161-like [Carya illinoinensis]2.9e-2158.02Show/hide
Query:  MHDSKKVSVPFGKHFKLYVDDSPKSPNEIEEMHDIPYASTVGSLMYATVCTRPDLAHPLSVVGRFLANPGKLHWNAVKWII
        M   K VS P G+HFKL+   +P++ +E+E MH IPYAS VGS+MYA VCTRPDL + +SVV RF++NPGK HW+A+KW++
Subjt:  MHDSKKVSVPFGKHFKLYVDDSPKSPNEIEEMHDIPYASTVGSLMYATVCTRPDLAHPLSVVGRFLANPGKLHWNAVKWII
TrEMBL top hitse value%identityAlignment
A0A438FKA3 Retrovirus-related Pol polyprotein from transposon TNT 1-941.8e-2158.02Show/hide
Query:  MHDSKKVSVPFGKHFKLYVDDSPKSPNEIEEMHDIPYASTVGSLMYATVCTRPDLAHPLSVVGRFLANPGKLHWNAVKWII
        M+++K VS P G HFKL  + SPK+  E++ M  +PYAS +GSLMYA VCTRPD+AH + VV RF++ PGK HW AVKWI+
Subjt:  MHDSKKVSVPFGKHFKLYVDDSPKSPNEIEEMHDIPYASTVGSLMYATVCTRPDLAHPLSVVGRFLANPGKLHWNAVKWII
A0A438HHC6 Retrovirus-related Pol polyprotein from transposon TNT 1-941.4e-2159.26Show/hide
Query:  MHDSKKVSVPFGKHFKLYVDDSPKSPNEIEEMHDIPYASTVGSLMYATVCTRPDLAHPLSVVGRFLANPGKLHWNAVKWII
        M+++K VS P G HFKL  + SPK+  E + M  +PYAST+GSLMYA VCTRPD+AH + VV RF++ PGK HW AVKWI+
Subjt:  MHDSKKVSVPFGKHFKLYVDDSPKSPNEIEEMHDIPYASTVGSLMYATVCTRPDLAHPLSVVGRFLANPGKLHWNAVKWII
A0A438JSJ2 Retrovirus-related Pol polyprotein from transposon TNT 1-941.8e-2158.02Show/hide
Query:  MHDSKKVSVPFGKHFKLYVDDSPKSPNEIEEMHDIPYASTVGSLMYATVCTRPDLAHPLSVVGRFLANPGKLHWNAVKWII
        M+++K VS P G HFKL  + SPK+  E++ M  +PYAS +GSLMYA VCTRPD+AH + VV RF++ PGK HW AVKWI+
Subjt:  MHDSKKVSVPFGKHFKLYVDDSPKSPNEIEEMHDIPYASTVGSLMYATVCTRPDLAHPLSVVGRFLANPGKLHWNAVKWII
A0A7N2R8B1 Uncharacterized protein1.4e-2158.02Show/hide
Query:  MHDSKKVSVPFGKHFKLYVDDSPKSPNEIEEMHDIPYASTVGSLMYATVCTRPDLAHPLSVVGRFLANPGKLHWNAVKWII
        M+++K VS P G HFKL ++ SPK+  E + M  +PYAS +GSLMYA VCTRPD+AH + VV RF++ PGK HW AVKWI+
Subjt:  MHDSKKVSVPFGKHFKLYVDDSPKSPNEIEEMHDIPYASTVGSLMYATVCTRPDLAHPLSVVGRFLANPGKLHWNAVKWII
A5BA89 Uncharacterized protein1.8e-2158.02Show/hide
Query:  MHDSKKVSVPFGKHFKLYVDDSPKSPNEIEEMHDIPYASTVGSLMYATVCTRPDLAHPLSVVGRFLANPGKLHWNAVKWII
        M+++K VS P G HFKL  + SPK+  E++ M  +PYAS +GSLMYA VCTRPD+AH + VV RF++ PGK HW AVKWI+
Subjt:  MHDSKKVSVPFGKHFKLYVDDSPKSPNEIEEMHDIPYASTVGSLMYATVCTRPDLAHPLSVVGRFLANPGKLHWNAVKWII
SwissProt top hitse value%identityAlignment
P0CV72 Secreted RxLR effector protein 1611.2e-0644Show/hide
Query:  MHDIPYASTVGSLMYATVCTRPDLAHPLSVVGRFLANPGKLHWNAVKWII
        M ++PY S VG++MY  V TRPDLA  + V+ +F ++P   HW A+K ++
Subjt:  MHDIPYASTVGSLMYATVCTRPDLAHPLSVVGRFLANPGKLHWNAVKWII
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.8e-1955.56Show/hide
Query:  MHDSKKVSVPFGKHFKLYVDDSPKSPNEIEEMHDIPYASTVGSLMYATVCTRPDLAHPLSVVGRFLANPGKLHWNAVKWII
        M ++K VS P   H KL     P +  E   M  +PY+S VGSLMYA VCTRPD+AH + VV RFL NPGK HW AVKWI+
Subjt:  MHDSKKVSVPFGKHFKLYVDDSPKSPNEIEEMHDIPYASTVGSLMYATVCTRPDLAHPLSVVGRFLANPGKLHWNAVKWII
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATGATAGTAAGAAGGTCAGTGTTCCTTTTGGAAAGCATTTCAAGTTATATGTCGATGATTCTCCCAAATCCCCTAATGAGATAGAAGAAATGCATGATATTCCATA
TGCTAGTACTGTTGGGAGTTTAATGTATGCTACGGTTTGTACTAGACCTGACCTTGCACATCCACTTAGTGTTGTTGGTAGATTTCTTGCTAATCCTGGTAAGCTACACT
GGAATGCTGTAAAGTGGATAATTATCTTGCATTTTATACTGATTTATGACTTGCTTATGGTGGAGCTAGTACAGTTGATTACAACAGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCATGATAGTAAGAAGGTCAGTGTTCCTTTTGGAAAGCATTTCAAGTTATATGTCGATGATTCTCCCAAATCCCCTAATGAGATAGAAGAAATGCATGATATTCCATA
TGCTAGTACTGTTGGGAGTTTAATGTATGCTACGGTTTGTACTAGACCTGACCTTGCACATCCACTTAGTGTTGTTGGTAGATTTCTTGCTAATCCTGGTAAGCTACACT
GGAATGCTGTAAAGTGGATAATTATCTTGCATTTTATACTGATTTATGACTTGCTTATGGTGGAGCTAGTACAGTTGATTACAACAGTGTAG
Protein sequenceShow/hide protein sequence
MHDSKKVSVPFGKHFKLYVDDSPKSPNEIEEMHDIPYASTVGSLMYATVCTRPDLAHPLSVVGRFLANPGKLHWNAVKWIIILHFILIYDLLMVELVQLITTV