; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc01g15630 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g15630
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 3-like
Genome locationchr1:10016311..10020059
RNA-Seq ExpressionMoc01g15630
SyntenyMoc01g15630
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR008906 - HAT, C-terminal dimerisation domain
IPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046182.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa]1.0e-3443.53Show/hide
Query:  SNNGSDIESD-----EDEVIHKPPTYDELFDAFENMQNDLEKVSSKYVRLSKKYKTLSIENKSLIDENTCLKNKATNDYVLHDDGCDEKYVLNDRIKFVE
        +N G  ++SD     +DEV  +PP+ +ELF+ FEN+QNDLEK+SSKYV L KKY  LS ENKSL+D+  C K                            
Subjt:  SNNGSDIESD-----EDEVIHKPPTYDELFDAFENMQNDLEKVSSKYVRLSKKYKTLSIENKSLIDENTCLKNKATNDYVLHDDGCDEKYVLNDRIKFVE

Query:  KENEDLKSLACELKIDLNDLRNKNEKMEYFSLELKDKIASLKNEIVMLETSNTSLEKAKISFIDKIKFIELDICEKNDLLHVLKEKELLASKKLEIAKEY
                             N N+++E  ++   DK     NE              K + +DK++F+E D CEK++L+ VLKE EL   + L+ AKE 
Subjt:  KENEDLKSLACELKIDLNDLRNKNEKMEYFSLELKDKIASLKNEIVMLETSNTSLEKAKISFIDKIKFIELDICEKNDLLHVLKEKELLASKKLEIAKEY

Query:  MKKLTIGTQRLDKIIEVGKPFGDKRGLGYIDECSTPSSSKTIFVKASPIMPKPNM
        +KKLTIG QRLDKIIEVGK +GDKR LGYIDE ST  SSKT FVKASPI+PK NM
Subjt:  MKKLTIGTQRLDKIIEVGKPFGDKRGLGYIDECSTPSSSKTIFVKASPIMPKPNM

KAA0051650.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa]2.0e-2563.46Show/hide
Query:  KISFIDKIKFIELDICEKNDLLHVLKEKELLASKKLEIAKEYMKKLTIGTQRLDKIIEVGKPFGDKRGLGYIDECSTPSSSKTIFVKASPIMPKPNMANV
        K + +DK++F+E D+CEK++L+ VLKE EL   + L+ AKE +KKLTI  QRL +IIEVGK +GDKRGLGYIDE STPSSSKT FVKASPI+P  NM N 
Subjt:  KISFIDKIKFIELDICEKNDLLHVLKEKELLASKKLEIAKEYMKKLTIGTQRLDKIIEVGKPFGDKRGLGYIDECSTPSSSKTIFVKASPIMPKPNMANV

Query:  VSKN
        VS +
Subjt:  VSKN

KAA0055026.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]2.6e-1764Show/hide
Query:  MSRDILTIPVSTVTNESTFSTGGCVIDCYRSSLAPKSVEALICTQNWLNSDPIDLELYQHLEEAFMVEEDKNICD
        M+RDIL IP+STV ++S F+TGG V+D  R SLAPK+VEALICTQNWLNSDPIDL++   LEEA   EED+ + +
Subjt:  MSRDILTIPVSTVTNESTFSTGGCVIDCYRSSLAPKSVEALICTQNWLNSDPIDLELYQHLEEAFMVEEDKNICD

XP_022156978.1 uncharacterized protein LOC111023806 [Momordica charantia]4.0e-2636.86Show/hide
Query:  SSLCVMAHSNNGSDIESDEDEVIHKPPTYDELFDAFENMQNDLEKVSSKYVRLSKKYKTLSIENKSLIDENTCLKNKATNDYVLHDDGCDEKYVLNDRIK
        ++ C MAHS+     +  +DEV   P +YDELF+AFENMQN+LEK+ SKYV L  K    + ENKSL D+  CLK                         
Subjt:  SSLCVMAHSNNGSDIESDEDEVIHKPPTYDELFDAFENMQNDLEKVSSKYVRLSKKYKTLSIENKSLIDENTCLKNKATNDYVLHDDGCDEKYVLNDRIK

Query:  FVEKENEDLKSLACELKIDLNDLRNKNEKMEYFSLELKDKIASLKNEIVMLETSNTSLEKAKISFIDKIKFIELDICEKNDLLHVLKEKELLASKKLEIA
                                 KNE                                                 + ++L+ +LK+ E  A  +L+ A
Subjt:  FVEKENEDLKSLACELKIDLNDLRNKNEKMEYFSLELKDKIASLKNEIVMLETSNTSLEKAKISFIDKIKFIELDICEKNDLLHVLKEKELLASKKLEIA

Query:  KEYMKKLTIGTQRLDKIIEVGKPFGDKRGLGYIDECSTPSSSKTIFVKASPIMPK
        K+++K+LTIG QRLDKIIE GKP+GDKRGLGYI+EC+TPSSSKTIFVKASP MPK
Subjt:  KEYMKKLTIGTQRLDKIIEVGKPFGDKRGLGYIDECSTPSSSKTIFVKASPIMPK

XP_031741720.1 uncharacterized protein LOC116403915 [Cucumis sativus]1.8e-3943.77Show/hide
Query:  SSLCVMAHSNNGSDIESDEDEVIHKPPTYDELFDAFENMQNDLEKVSSKYVRLSKKYKTLSIENKSLIDENTCLKNKATNDYVLHDDGCDEKYVLNDRIK
        ++L +MAHS+     +  +D+V  +P + DELF+ FE+MQNDLEK+SSKYV L KKY  L  ENKSL+D   C                           
Subjt:  SSLCVMAHSNNGSDIESDEDEVIHKPPTYDELFDAFENMQNDLEKVSSKYVRLSKKYKTLSIENKSLIDENTCLKNKATNDYVLHDDGCDEKYVLNDRIK

Query:  FVEKENEDLKSLACELKIDLNDLRNKNEKMEYFSLELKDKIASLKNEIVMLETSNTSLEKAKISFIDKIKFIELDICEKNDLLHVLKEKELLASKKLEIA
           KENE+ + +      +LN   +K+  +E                              K + +DK++F+E D CEK++L+ VLKE EL   ++L+ A
Subjt:  FVEKENEDLKSLACELKIDLNDLRNKNEKMEYFSLELKDKIASLKNEIVMLETSNTSLEKAKISFIDKIKFIELDICEKNDLLHVLKEKELLASKKLEIA

Query:  KEYMKKLTIGTQRLDKIIEVGKPFGDKRGLGYIDECSTPSSSKTIFVKASPIMPKPNMANVVSKN
        KE +KKLTIG QRLDKIIEVGK +GDKRGLGYIDE STPSSSKT FVKASPI+PK NM+N VS +
Subjt:  KEYMKKLTIGTQRLDKIIEVGKPFGDKRGLGYIDECSTPSSSKTIFVKASPIMPKPNMANVVSKN

TrEMBL top hitse value%identityAlignment
A0A5A7TRZ7 Zf-CCHC domain-containing protein/UBN2 domain-containing protein5.1e-3543.53Show/hide
Query:  SNNGSDIESD-----EDEVIHKPPTYDELFDAFENMQNDLEKVSSKYVRLSKKYKTLSIENKSLIDENTCLKNKATNDYVLHDDGCDEKYVLNDRIKFVE
        +N G  ++SD     +DEV  +PP+ +ELF+ FEN+QNDLEK+SSKYV L KKY  LS ENKSL+D+  C K                            
Subjt:  SNNGSDIESD-----EDEVIHKPPTYDELFDAFENMQNDLEKVSSKYVRLSKKYKTLSIENKSLIDENTCLKNKATNDYVLHDDGCDEKYVLNDRIKFVE

Query:  KENEDLKSLACELKIDLNDLRNKNEKMEYFSLELKDKIASLKNEIVMLETSNTSLEKAKISFIDKIKFIELDICEKNDLLHVLKEKELLASKKLEIAKEY
                             N N+++E  ++   DK     NE              K + +DK++F+E D CEK++L+ VLKE EL   + L+ AKE 
Subjt:  KENEDLKSLACELKIDLNDLRNKNEKMEYFSLELKDKIASLKNEIVMLETSNTSLEKAKISFIDKIKFIELDICEKNDLLHVLKEKELLASKKLEIAKEY

Query:  MKKLTIGTQRLDKIIEVGKPFGDKRGLGYIDECSTPSSSKTIFVKASPIMPKPNM
        +KKLTIG QRLDKIIEVGK +GDKR LGYIDE ST  SSKT FVKASPI+PK NM
Subjt:  MKKLTIGTQRLDKIIEVGKPFGDKRGLGYIDECSTPSSSKTIFVKASPIMPKPNM

A0A5A7U7I9 Zinc finger BED domain-containing protein RICESLEEPER 3-like1.4e-1661.18Show/hide
Query:  MSRDILTIPVSTVTNESTFSTGGCVIDCYRSSLAPKSVEALICTQNWLNSDPIDLELYQHLEEAFMVEEDKNICDKISHFTYAYD
        M+RDIL IPV TV +ES FSTGG V+D  R  LAPK+VEALICTQNWLNSDPI L+    LEEA   EED N  D+      AY+
Subjt:  MSRDILTIPVSTVTNESTFSTGGCVIDCYRSSLAPKSVEALICTQNWLNSDPIDLELYQHLEEAFMVEEDKNICDKISHFTYAYD

A0A5A7U923 Zf-CCHC domain-containing protein/UBN2 domain-containing protein9.6e-2663.46Show/hide
Query:  KISFIDKIKFIELDICEKNDLLHVLKEKELLASKKLEIAKEYMKKLTIGTQRLDKIIEVGKPFGDKRGLGYIDECSTPSSSKTIFVKASPIMPKPNMANV
        K + +DK++F+E D+CEK++L+ VLKE EL   + L+ AKE +KKLTI  QRL +IIEVGK +GDKRGLGYIDE STPSSSKT FVKASPI+P  NM N 
Subjt:  KISFIDKIKFIELDICEKNDLLHVLKEKELLASKKLEIAKEYMKKLTIGTQRLDKIIEVGKPFGDKRGLGYIDECSTPSSSKTIFVKASPIMPKPNMANV

Query:  VSKN
        VS +
Subjt:  VSKN

A0A5A7UL54 Zinc finger BED domain-containing protein RICESLEEPER 2-like1.3e-1764Show/hide
Query:  MSRDILTIPVSTVTNESTFSTGGCVIDCYRSSLAPKSVEALICTQNWLNSDPIDLELYQHLEEAFMVEEDKNICD
        M+RDIL IP+STV ++S F+TGG V+D  R SLAPK+VEALICTQNWLNSDPIDL++   LEEA   EED+ + +
Subjt:  MSRDILTIPVSTVTNESTFSTGGCVIDCYRSSLAPKSVEALICTQNWLNSDPIDLELYQHLEEAFMVEEDKNICD

A0A6J1DS74 uncharacterized protein LOC1110238061.9e-2636.86Show/hide
Query:  SSLCVMAHSNNGSDIESDEDEVIHKPPTYDELFDAFENMQNDLEKVSSKYVRLSKKYKTLSIENKSLIDENTCLKNKATNDYVLHDDGCDEKYVLNDRIK
        ++ C MAHS+     +  +DEV   P +YDELF+AFENMQN+LEK+ SKYV L  K    + ENKSL D+  CLK                         
Subjt:  SSLCVMAHSNNGSDIESDEDEVIHKPPTYDELFDAFENMQNDLEKVSSKYVRLSKKYKTLSIENKSLIDENTCLKNKATNDYVLHDDGCDEKYVLNDRIK

Query:  FVEKENEDLKSLACELKIDLNDLRNKNEKMEYFSLELKDKIASLKNEIVMLETSNTSLEKAKISFIDKIKFIELDICEKNDLLHVLKEKELLASKKLEIA
                                 KNE                                                 + ++L+ +LK+ E  A  +L+ A
Subjt:  FVEKENEDLKSLACELKIDLNDLRNKNEKMEYFSLELKDKIASLKNEIVMLETSNTSLEKAKISFIDKIKFIELDICEKNDLLHVLKEKELLASKKLEIA

Query:  KEYMKKLTIGTQRLDKIIEVGKPFGDKRGLGYIDECSTPSSSKTIFVKASPIMPK
        K+++K+LTIG QRLDKIIE GKP+GDKRGLGYI+EC+TPSSSKTIFVKASP MPK
Subjt:  KEYMKKLTIGTQRLDKIIEVGKPFGDKRGLGYIDECSTPSSSKTIFVKASPIMPK

SwissProt top hitse value%identityAlignment
P03010 Putative AC9 transposase1.9e-0756.25Show/hide
Query:  MSRDILTIPVSTVTNESTFSTGGCVIDCYRSSLAPKSVEALICTQNWL
        ++RD+L I VSTV +ES FS GG V+D YR+ L  + VEALICT++W+
Subjt:  MSRDILTIPVSTVTNESTFSTGGCVIDCYRSSLAPKSVEALICTQNWL

P08770 Putative AC transposase1.9e-0756.25Show/hide
Query:  MSRDILTIPVSTVTNESTFSTGGCVIDCYRSSLAPKSVEALICTQNWL
        ++RD+L I VSTV +ES FS GG V+D YR+ L  + VEALICT++W+
Subjt:  MSRDILTIPVSTVTNESTFSTGGCVIDCYRSSLAPKSVEALICTQNWL

Q0JMB2 Zinc finger BED domain-containing protein RICESLEEPER 49.0e-0549.09Show/hide
Query:  MSRDILTIPVSTV-TNESTF--STGGCVIDCYRSSLAPKSVEALICTQNWLNSDP
        M+RD+L IP+STV    S F    G   +D YRSSL P+ VEAL+C ++WL   P
Subjt:  MSRDILTIPVSTV-TNESTF--STGGCVIDCYRSSLAPKSVEALICTQNWLNSDP

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 24.0e-0552.73Show/hide
Query:  MSRDILTIPVSTVTN-ESTFS--TGGCVIDCYRSSLAPKSVEALICTQNWLNSDP
        M+RDIL IP+S V++  S FS  TG  ++D YRSSL P+ VEAL+C ++WL   P
Subjt:  MSRDILTIPVSTVTN-ESTFS--TGGCVIDCYRSSLAPKSVEALICTQNWLNSDP

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 36.2e-0645Show/hide
Query:  MSRDILTIPVSTVTNESTF----STGGCVIDCYRSSLAPKSVEALICTQNWLNSDPIDLE
        M+RD+L IP+S V++ S+     +TG  ++D YRSSL P++VEAL C ++WL   P   E
Subjt:  MSRDILTIPVSTVTNESTF----STGGCVIDCYRSSLAPKSVEALICTQNWLNSDPIDLE

Arabidopsis top hitse value%identityAlignment
AT3G42170.1 BED zinc finger ;hAT family dimerisation domain3.2e-0547.92Show/hide
Query:  MSRDILTIPVSTVTNESTFSTGGCVIDCYRSSLAPKSVEALICTQNWL
        M+RDIL+IPVS    +  F      +D Y++SL P++VEALIC + WL
Subjt:  MSRDILTIPVSTVTNESTFSTGGCVIDCYRSSLAPKSVEALICTQNWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGAGATATTTTGACAATTCCAGTATCGACAGTAACAAATGAATCAACTTTCAGTACTGGAGGATGTGTAATTGATTGCTATCGTTCTTCATTGGCTCCAAAATC
CGTGGAGGCTCTTATATGCACTCAAAATTGGCTAAATTCTGACCCAATAGATCTTGAACTTTATCAACACTTGGAGGAAGCTTTCATGGTGGAGGAAGATAAAAATATAT
GTGATAAAATTTCACATTTTACATATGCATATGATATTTGGAATTTTCTTGATAATATGTATAGTGTTGAAAATTCTCCTTGTACTACTAATGATTTATTTGATGTGAAG
GAGAATTATAATTCTCAAAATCAAGAAAAATTCAATGAAGTGGGAAAAGAAAAATGTGATGGATCCTCCTTGTGCGTGATGGCTCATTCAAATAATGGGAGCGATATCGA
AAGCGATGAGGACGAGGTAATTCATAAGCCCCCAACTTATGATGAATTATTTGATGCATTTGAGAACATGCAAAATGACCTTGAAAAAGTTAGCTCTAAATATGTTAGAC
TATCAAAGAAGTACAAAACATTGTCCATTGAAAATAAATCTTTGATAGATGAAAATACTTGTTTGAAAAATAAAGCCACAAATGATTATGTATTGCATGATGATGGTTGT
GATGAAAAATATGTTTTGAATGATAGGATTAAATTTGTTGAAAAAGAAAATGAGGATCTCAAATCTCTAGCATGCGAATTAAAAATTGATTTGAATGATTTGAGAAATAA
GAATGAGAAAATGGAATATTTTTCTTTAGAATTAAAGGATAAAATTGCTAGCTTGAAAAATGAAATTGTTATGTTGGAAACTAGCAATACATCTTTGGAGAAAGCGAAAA
TTTCATTTATTGACAAAATTAAATTTATTGAGCTTGATATTTGTGAGAAAAATGATCTTTTGCATGTGCTTAAGGAAAAAGAATTACTTGCTAGTAAAAAGCTTGAAATT
GCAAAAGAGTATATGAAGAAATTGACAATAGGTACTCAAAGATTAGATAAAATAATTGAAGTAGGCAAACCTTTTGGTGATAAGAGAGGTTTAGGCTATATAGATGAATG
TTCTACTCCTTCAAGTTCTAAAACTATCTTTGTTAAAGCATCACCTATAATGCCTAAGCCTAATATGGCTAATGTTGTTTCTAAGAATTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTAGAGATATTTTGACAATTCCAGTATCGACAGTAACAAATGAATCAACTTTCAGTACTGGAGGATGTGTAATTGATTGCTATCGTTCTTCATTGGCTCCAAAATC
CGTGGAGGCTCTTATATGCACTCAAAATTGGCTAAATTCTGACCCAATAGATCTTGAACTTTATCAACACTTGGAGGAAGCTTTCATGGTGGAGGAAGATAAAAATATAT
GTGATAAAATTTCACATTTTACATATGCATATGATATTTGGAATTTTCTTGATAATATGTATAGTGTTGAAAATTCTCCTTGTACTACTAATGATTTATTTGATGTGAAG
GAGAATTATAATTCTCAAAATCAAGAAAAATTCAATGAAGTGGGAAAAGAAAAATGTGATGGATCCTCCTTGTGCGTGATGGCTCATTCAAATAATGGGAGCGATATCGA
AAGCGATGAGGACGAGGTAATTCATAAGCCCCCAACTTATGATGAATTATTTGATGCATTTGAGAACATGCAAAATGACCTTGAAAAAGTTAGCTCTAAATATGTTAGAC
TATCAAAGAAGTACAAAACATTGTCCATTGAAAATAAATCTTTGATAGATGAAAATACTTGTTTGAAAAATAAAGCCACAAATGATTATGTATTGCATGATGATGGTTGT
GATGAAAAATATGTTTTGAATGATAGGATTAAATTTGTTGAAAAAGAAAATGAGGATCTCAAATCTCTAGCATGCGAATTAAAAATTGATTTGAATGATTTGAGAAATAA
GAATGAGAAAATGGAATATTTTTCTTTAGAATTAAAGGATAAAATTGCTAGCTTGAAAAATGAAATTGTTATGTTGGAAACTAGCAATACATCTTTGGAGAAAGCGAAAA
TTTCATTTATTGACAAAATTAAATTTATTGAGCTTGATATTTGTGAGAAAAATGATCTTTTGCATGTGCTTAAGGAAAAAGAATTACTTGCTAGTAAAAAGCTTGAAATT
GCAAAAGAGTATATGAAGAAATTGACAATAGGTACTCAAAGATTAGATAAAATAATTGAAGTAGGCAAACCTTTTGGTGATAAGAGAGGTTTAGGCTATATAGATGAATG
TTCTACTCCTTCAAGTTCTAAAACTATCTTTGTTAAAGCATCACCTATAATGCCTAAGCCTAATATGGCTAATGTTGTTTCTAAGAATTGCTAA
Protein sequenceShow/hide protein sequence
MSRDILTIPVSTVTNESTFSTGGCVIDCYRSSLAPKSVEALICTQNWLNSDPIDLELYQHLEEAFMVEEDKNICDKISHFTYAYDIWNFLDNMYSVENSPCTTNDLFDVK
ENYNSQNQEKFNEVGKEKCDGSSLCVMAHSNNGSDIESDEDEVIHKPPTYDELFDAFENMQNDLEKVSSKYVRLSKKYKTLSIENKSLIDENTCLKNKATNDYVLHDDGC
DEKYVLNDRIKFVEKENEDLKSLACELKIDLNDLRNKNEKMEYFSLELKDKIASLKNEIVMLETSNTSLEKAKISFIDKIKFIELDICEKNDLLHVLKEKELLASKKLEI
AKEYMKKLTIGTQRLDKIIEVGKPFGDKRGLGYIDECSTPSSSKTIFVKASPIMPKPNMANVVSKNC