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Moc01g15680 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g15680
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr1:10070292..10071224
RNA-Seq ExpressionMoc01g15680
SyntenyMoc01g15680
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150028.1 uncharacterized protein LOC111018300 [Momordica charantia]3.5e-1556.76Show/hide
Query:  KGQEAISMAWKIKASSHKRPKGRYCLFHRDHDYSTQDCYDLKEEVEDLIREGLLKEFVKDSKATLNSDQDNKSP
        K Q  +    ++ A   KR KGRYCLFHRDHD++TQDC+DLK+EV++LI+ G LKE+V+D KAT N + D+KSP
Subjt:  KGQEAISMAWKIKASSHKRPKGRYCLFHRDHDYSTQDCYDLKEEVEDLIREGLLKEFVKDSKATLNSDQDNKSP

XP_022151636.1 uncharacterized protein LOC111019544 [Momordica charantia]1.2e-1559.46Show/hide
Query:  KGQEAISMAWKIKASSHKRPKGRYCLFHRDHDYSTQDCYDLKEEVEDLIREGLLKEFVKDSKATLNSDQDNKSP
        K Q       ++KAS +KR KGRYCLFHRDH ++T DC+DLKEEVE  I +G LKE+++D KAT NS+ DNKSP
Subjt:  KGQEAISMAWKIKASSHKRPKGRYCLFHRDHDYSTQDCYDLKEEVEDLIREGLLKEFVKDSKATLNSDQDNKSP

XP_022158093.1 uncharacterized protein LOC111024662 [Momordica charantia]7.1e-1669.84Show/hide
Query:  IKASSHKRPKGRYCLFHRDHDYSTQDCYDLKEEVEDLIREGLLKEFVKDSKATLNSDQDNKSP
        +KA  +KR K RYCLFHRDH ++TQDC+DLKEEVE LIR G LKE+V+D KATLNS+ D+KSP
Subjt:  IKASSHKRPKGRYCLFHRDHDYSTQDCYDLKEEVEDLIREGLLKEFVKDSKATLNSDQDNKSP

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]9.9e-1829.37Show/hide
Query:  MKEKVPSKFKLLAIKWYDGSTDPIDHLDGYREWMNIYKNRSQEK---------ASKNMWLDSTRRS--------------------CRAR----------
        M+EKVP KFKL  +K +D +TDP+DHLD YREWM+IY      +          S  +W    +R                     CR+R          
Subjt:  MKEKVPSKFKLLAIKWYDGSTDPIDHLDGYREWMNIYKNRSQEK---------ASKNMWLDSTRRS--------------------CRAR----------

Query:  -----------------------VDRVSFLDFMSG--------------SNKGQEAISMA----------------------------------------
                                D VS L FMSG               N   EA+S A                                        
Subjt:  -----------------------VDRVSFLDFMSG--------------SNKGQEAISMA----------------------------------------

Query:  ------------------------------------W--KIKASSHKRPKGRYCLFHRDHDYSTQDCYDLKEEVEDLIREGLLKEFVKDSKATLNSDQDN
                                            W  ++KASS KR KGRYCLFHRDH ++TQDC+DLKEEVE LIR G LKE+V++ KAT N + D 
Subjt:  ------------------------------------W--KIKASSHKRPKGRYCLFHRDHDYSTQDCYDLKEEVEDLIREGLLKEFVKDSKATLNSDQDN

Query:  KSP
        KSP
Subjt:  KSP

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]2.7e-1560.81Show/hide
Query:  KGQEAISMAWKIKASSHKRPKGRYCLFHRDHDYSTQDCYDLKEEVEDLIREGLLKEFVKDSKATLNSDQDNKSP
        K Q  +     +KA  +KR KGRYCLFHRDH ++T DC+DLKEEVE LIR+G LKE+V D KAT N + DNKSP
Subjt:  KGQEAISMAWKIKASSHKRPKGRYCLFHRDHDYSTQDCYDLKEEVEDLIREGLLKEFVKDSKATLNSDQDNKSP

TrEMBL top hitse value%identityAlignment
A0A6J1D8C9 uncharacterized protein LOC1110183001.7e-1556.76Show/hide
Query:  KGQEAISMAWKIKASSHKRPKGRYCLFHRDHDYSTQDCYDLKEEVEDLIREGLLKEFVKDSKATLNSDQDNKSP
        K Q  +    ++ A   KR KGRYCLFHRDHD++TQDC+DLK+EV++LI+ G LKE+V+D KAT N + D+KSP
Subjt:  KGQEAISMAWKIKASSHKRPKGRYCLFHRDHDYSTQDCYDLKEEVEDLIREGLLKEFVKDSKATLNSDQDNKSP

A0A6J1DF96 uncharacterized protein LOC1110195445.9e-1659.46Show/hide
Query:  KGQEAISMAWKIKASSHKRPKGRYCLFHRDHDYSTQDCYDLKEEVEDLIREGLLKEFVKDSKATLNSDQDNKSP
        K Q       ++KAS +KR KGRYCLFHRDH ++T DC+DLKEEVE  I +G LKE+++D KAT NS+ DNKSP
Subjt:  KGQEAISMAWKIKASSHKRPKGRYCLFHRDHDYSTQDCYDLKEEVEDLIREGLLKEFVKDSKATLNSDQDNKSP

A0A6J1DV51 uncharacterized protein LOC1110246623.4e-1669.84Show/hide
Query:  IKASSHKRPKGRYCLFHRDHDYSTQDCYDLKEEVEDLIREGLLKEFVKDSKATLNSDQDNKSP
        +KA  +KR K RYCLFHRDH ++TQDC+DLKEEVE LIR G LKE+V+D KATLNS+ D+KSP
Subjt:  IKASSHKRPKGRYCLFHRDHDYSTQDCYDLKEEVEDLIREGLLKEFVKDSKATLNSDQDNKSP

A0A6J1DWY0 uncharacterized protein LOC1110252934.8e-1829.37Show/hide
Query:  MKEKVPSKFKLLAIKWYDGSTDPIDHLDGYREWMNIYKNRSQEK---------ASKNMWLDSTRRS--------------------CRAR----------
        M+EKVP KFKL  +K +D +TDP+DHLD YREWM+IY      +          S  +W    +R                     CR+R          
Subjt:  MKEKVPSKFKLLAIKWYDGSTDPIDHLDGYREWMNIYKNRSQEK---------ASKNMWLDSTRRS--------------------CRAR----------

Query:  -----------------------VDRVSFLDFMSG--------------SNKGQEAISMA----------------------------------------
                                D VS L FMSG               N   EA+S A                                        
Subjt:  -----------------------VDRVSFLDFMSG--------------SNKGQEAISMA----------------------------------------

Query:  ------------------------------------W--KIKASSHKRPKGRYCLFHRDHDYSTQDCYDLKEEVEDLIREGLLKEFVKDSKATLNSDQDN
                                            W  ++KASS KR KGRYCLFHRDH ++TQDC+DLKEEVE LIR G LKE+V++ KAT N + D 
Subjt:  ------------------------------------W--KIKASSHKRPKGRYCLFHRDHDYSTQDCYDLKEEVEDLIREGLLKEFVKDSKATLNSDQDN

Query:  KSP
        KSP
Subjt:  KSP

A0A6J1DZ52 uncharacterized protein LOC1110256121.3e-1560.81Show/hide
Query:  KGQEAISMAWKIKASSHKRPKGRYCLFHRDHDYSTQDCYDLKEEVEDLIREGLLKEFVKDSKATLNSDQDNKSP
        K Q  +     +KA  +KR KGRYCLFHRDH ++T DC+DLKEEVE LIR+G LKE+V D KAT N + DNKSP
Subjt:  KGQEAISMAWKIKASSHKRPKGRYCLFHRDHDYSTQDCYDLKEEVEDLIREGLLKEFVKDSKATLNSDQDNKSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAGAAAGTCCCGTCGAAGTTCAAGCTTCTAGCCATCAAATGGTACGATGGCTCGACGGATCCTATCGACCACCTAGATGGATATAGGGAATGGATGAACATTTA
CAAGAACAGAAGTCAAGAGAAAGCCTCAAAGAATATGTGGCTTGATTCAACAAGGAGAAGTTGCAGGGCAAGGGTTGACAGAGTGTCTTTTCTCGACTTCATGTCTGGTT
CTAATAAGGGACAAGAAGCTATTTCGATGGCCTGGAAGATTAAAGCATCATCTCATAAGAGGCCTAAAGGAAGATATTGCCTCTTCCATCGAGATCACGATTATTCAACA
CAGGACTGTTATGATCTCAAAGAGGAAGTAGAAGATCTCATTCGAGAAGGCCTCCTCAAAGAATTCGTGAAGGACTCTAAGGCAACTCTGAACAGCGACCAGGACAACAA
GTCTCCTCCAGGGAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGAGAAAGTCCCGTCGAAGTTCAAGCTTCTAGCCATCAAATGGTACGATGGCTCGACGGATCCTATCGACCACCTAGATGGATATAGGGAATGGATGAACATTTA
CAAGAACAGAAGTCAAGAGAAAGCCTCAAAGAATATGTGGCTTGATTCAACAAGGAGAAGTTGCAGGGCAAGGGTTGACAGAGTGTCTTTTCTCGACTTCATGTCTGGTT
CTAATAAGGGACAAGAAGCTATTTCGATGGCCTGGAAGATTAAAGCATCATCTCATAAGAGGCCTAAAGGAAGATATTGCCTCTTCCATCGAGATCACGATTATTCAACA
CAGGACTGTTATGATCTCAAAGAGGAAGTAGAAGATCTCATTCGAGAAGGCCTCCTCAAAGAATTCGTGAAGGACTCTAAGGCAACTCTGAACAGCGACCAGGACAACAA
GTCTCCTCCAGGGAGATAA
Protein sequenceShow/hide protein sequence
MKEKVPSKFKLLAIKWYDGSTDPIDHLDGYREWMNIYKNRSQEKASKNMWLDSTRRSCRARVDRVSFLDFMSGSNKGQEAISMAWKIKASSHKRPKGRYCLFHRDHDYST
QDCYDLKEEVEDLIREGLLKEFVKDSKATLNSDQDNKSPPGR