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Moc01g15860 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g15860
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr1:10205685..10213616
RNA-Seq ExpressionMoc01g15860
SyntenyMoc01g15860
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]2.0e-1339.1Show/hide
Query:  MHTQVRTIEELYNNLLHATRIGSPYHN-LDEDEEHRFQDETCDP--NQHPDDEDNPINDDCDYSHREDDLGNYLVDKKGKGPTLKGADASLSYSQKNQND
        M TQ+ T+E++Y+ ++ A    S   N +  ++ H  +     P    HP+       +D +Y+H+  DL  +L ++K      KG   S S+  +N N 
Subjt:  MHTQVRTIEELYNNLLHATRIGSPYHN-LDEDEEHRFQDETCDP--NQHPDDEDNPINDDCDYSHREDDLGNYLVDKKGKGPTLKGADASLSYSQKNQND

Query:  KAQSQYTPVELQGVITREEFDLMKRRFNAQAEVLKQKCEKKESVSDDGEPSESPFT
        +A+S Y P+  +GVITREEFD +K +F+AQ E LK KCEKKES  DDG+  ESPFT
Subjt:  KAQSQYTPVELQGVITREEFDLMKRRFNAQAEVLKQKCEKKESVSDDGEPSESPFT

XP_022154406.1 uncharacterized protein LOC111021683 [Momordica charantia]2.5e-1140.94Show/hide
Query:  IEELYNNLLHATRIGSPYHNLDEDEEHRFQDETCDPNQHPDDEDNPIND-DCDYSHREDDLGNYLVDKKGKGPTLKGADASLSYSQK--NQNDKAQSQYT
        +E++Y     A R  SP              E   P+  P D +   ND   DYS R++D+  +L +KK +    +  + SLSYS+K  N N KAQS+Y 
Subjt:  IEELYNNLLHATRIGSPYHNLDEDEEHRFQDETCDPNQHPDDEDNPIND-DCDYSHREDDLGNYLVDKKGKGPTLKGADASLSYSQK--NQNDKAQSQYT

Query:  PVELQGVITREEFDLMKRRFNAQAEVLKQKCEKKESVSDDGEPSESPFT
        P+  + +ITREEFDLMK +F  Q E LK +CEKKE   D+G+  ESPFT
Subjt:  PVELQGVITREEFDLMKRRFNAQAEVLKQKCEKKESVSDDGEPSESPFT

XP_022155139.1 uncharacterized protein LOC111022280 [Momordica charantia]2.9e-1250Show/hide
Query:  PNQHPDDEDNPINDD-CDYSHREDDLGNYLVDKKGKGPTLKGADASLSYSQK--NQNDKAQSQYTPVELQGVITREEFDLMKRRFNAQAEVLKQKCEKKE
        P+  P + +   ND+  DYS R++DL  +L DKK K       + SLSYS++  N N KAQS+Y P+  + VI REEFDLMK RF+ Q E LK +CEKKE
Subjt:  PNQHPDDEDNPINDD-CDYSHREDDLGNYLVDKKGKGPTLKGADASLSYSQK--NQNDKAQSQYTPVELQGVITREEFDLMKRRFNAQAEVLKQKCEKKE

Query:  SVSDDGEPSESPFT
        S  DD +  ESPFT
Subjt:  SVSDDGEPSESPFT

XP_022156088.1 uncharacterized protein LOC111023060 [Momordica charantia]1.5e-1337.11Show/hide
Query:  LKDMHTQVRTIEELYNNLLHATRIGSPYHNLDE---DEEHRFQDETCDPNQHPDDEDNPINDDCDYSHREDDLGNYLVDKKGKGPTLKGADASLSYSQKN
        ++ M TQ+RT+EE+YN ++     G+   + D+   ++ H   D  CDP               D  H   DL ++L  K+         + + +Y  KN
Subjt:  LKDMHTQVRTIEELYNNLLHATRIGSPYHNLDE---DEEHRFQDETCDPNQHPDDEDNPINDDCDYSHREDDLGNYLVDKKGKGPTLKGADASLSYSQKN

Query:  QNDKAQSQYTPVELQGVITREEFDLMKRRFNAQAEVLKQKCEKKESVSDDGEPSESPFT
         N +A+S Y P+  +GVITREEF+ +K +F+AQ E LK +CEKKES  DDG+  ESPFT
Subjt:  QNDKAQSQYTPVELQGVITREEFDLMKRRFNAQAEVLKQKCEKKESVSDDGEPSESPFT

XP_022159327.1 uncharacterized protein LOC111025738 [Momordica charantia]4.5e-1335.83Show/hide
Query:  AHQTRGGATKKIAQRSHRHVDPNVLAAMQLELKDMHTQVRTIEELYNNLLHATRIGSPYHNLDEDEEHRFQDETCDPNQHPDDEDNPINDDCDYSHREDD
        A++ RGGA+++    +          A+Q E++ M TQ+ T+EE+YN ++ A   GS        E+   +DE  D   H   +            R   
Subjt:  AHQTRGGATKKIAQRSHRHVDPNVLAAMQLELKDMHTQVRTIEELYNNLLHATRIGSPYHNLDEDEEHRFQDETCDPNQHPDDEDNPINDDCDYSHREDD

Query:  LGNYLVDKKGKGPTLKGADASLSYSQKNQNDKAQSQYTPVELQGVITREEFDLMKRRFNAQAEVLKQKCEKKESVSDDGEPSESPFT
        L      +KG+ P         S S KN N +A+S Y PV  +GVITREEFD +K +F+AQ E LK +CE K S  DDG+  ESPFT
Subjt:  LGNYLVDKKGKGPTLKGADASLSYSQKNQNDKAQSQYTPVELQGVITREEFDLMKRRFNAQAEVLKQKCEKKESVSDDGEPSESPFT

TrEMBL top hitse value%identityAlignment
A0A6J1DDW5 uncharacterized protein LOC1110196349.7e-1439.1Show/hide
Query:  MHTQVRTIEELYNNLLHATRIGSPYHN-LDEDEEHRFQDETCDP--NQHPDDEDNPINDDCDYSHREDDLGNYLVDKKGKGPTLKGADASLSYSQKNQND
        M TQ+ T+E++Y+ ++ A    S   N +  ++ H  +     P    HP+       +D +Y+H+  DL  +L ++K      KG   S S+  +N N 
Subjt:  MHTQVRTIEELYNNLLHATRIGSPYHN-LDEDEEHRFQDETCDP--NQHPDDEDNPINDDCDYSHREDDLGNYLVDKKGKGPTLKGADASLSYSQKNQND

Query:  KAQSQYTPVELQGVITREEFDLMKRRFNAQAEVLKQKCEKKESVSDDGEPSESPFT
        +A+S Y P+  +GVITREEFD +K +F+AQ E LK KCEKKES  DDG+  ESPFT
Subjt:  KAQSQYTPVELQGVITREEFDLMKRRFNAQAEVLKQKCEKKESVSDDGEPSESPFT

A0A6J1DNM4 Ribonuclease H1.2e-1140.94Show/hide
Query:  IEELYNNLLHATRIGSPYHNLDEDEEHRFQDETCDPNQHPDDEDNPIND-DCDYSHREDDLGNYLVDKKGKGPTLKGADASLSYSQK--NQNDKAQSQYT
        +E++Y     A R  SP              E   P+  P D +   ND   DYS R++D+  +L +KK +    +  + SLSYS+K  N N KAQS+Y 
Subjt:  IEELYNNLLHATRIGSPYHNLDEDEEHRFQDETCDPNQHPDDEDNPIND-DCDYSHREDDLGNYLVDKKGKGPTLKGADASLSYSQK--NQNDKAQSQYT

Query:  PVELQGVITREEFDLMKRRFNAQAEVLKQKCEKKESVSDDGEPSESPFT
        P+  + +ITREEFDLMK +F  Q E LK +CEKKE   D+G+  ESPFT
Subjt:  PVELQGVITREEFDLMKRRFNAQAEVLKQKCEKKESVSDDGEPSESPFT

A0A6J1DPC9 uncharacterized protein LOC1110222801.4e-1250Show/hide
Query:  PNQHPDDEDNPINDD-CDYSHREDDLGNYLVDKKGKGPTLKGADASLSYSQK--NQNDKAQSQYTPVELQGVITREEFDLMKRRFNAQAEVLKQKCEKKE
        P+  P + +   ND+  DYS R++DL  +L DKK K       + SLSYS++  N N KAQS+Y P+  + VI REEFDLMK RF+ Q E LK +CEKKE
Subjt:  PNQHPDDEDNPINDD-CDYSHREDDLGNYLVDKKGKGPTLKGADASLSYSQK--NQNDKAQSQYTPVELQGVITREEFDLMKRRFNAQAEVLKQKCEKKE

Query:  SVSDDGEPSESPFT
        S  DD +  ESPFT
Subjt:  SVSDDGEPSESPFT

A0A6J1DPN4 uncharacterized protein LOC1110230607.4e-1437.11Show/hide
Query:  LKDMHTQVRTIEELYNNLLHATRIGSPYHNLDE---DEEHRFQDETCDPNQHPDDEDNPINDDCDYSHREDDLGNYLVDKKGKGPTLKGADASLSYSQKN
        ++ M TQ+RT+EE+YN ++     G+   + D+   ++ H   D  CDP               D  H   DL ++L  K+         + + +Y  KN
Subjt:  LKDMHTQVRTIEELYNNLLHATRIGSPYHNLDE---DEEHRFQDETCDPNQHPDDEDNPINDDCDYSHREDDLGNYLVDKKGKGPTLKGADASLSYSQKN

Query:  QNDKAQSQYTPVELQGVITREEFDLMKRRFNAQAEVLKQKCEKKESVSDDGEPSESPFT
         N +A+S Y P+  +GVITREEF+ +K +F+AQ E LK +CEKKES  DDG+  ESPFT
Subjt:  QNDKAQSQYTPVELQGVITREEFDLMKRRFNAQAEVLKQKCEKKESVSDDGEPSESPFT

A0A6J1DZJ1 uncharacterized protein LOC1110257382.2e-1335.83Show/hide
Query:  AHQTRGGATKKIAQRSHRHVDPNVLAAMQLELKDMHTQVRTIEELYNNLLHATRIGSPYHNLDEDEEHRFQDETCDPNQHPDDEDNPINDDCDYSHREDD
        A++ RGGA+++    +          A+Q E++ M TQ+ T+EE+YN ++ A   GS        E+   +DE  D   H   +            R   
Subjt:  AHQTRGGATKKIAQRSHRHVDPNVLAAMQLELKDMHTQVRTIEELYNNLLHATRIGSPYHNLDEDEEHRFQDETCDPNQHPDDEDNPINDDCDYSHREDD

Query:  LGNYLVDKKGKGPTLKGADASLSYSQKNQNDKAQSQYTPVELQGVITREEFDLMKRRFNAQAEVLKQKCEKKESVSDDGEPSESPFT
        L      +KG+ P         S S KN N +A+S Y PV  +GVITREEFD +K +F+AQ E LK +CE K S  DDG+  ESPFT
Subjt:  LGNYLVDKKGKGPTLKGADASLSYSQKNQNDKAQSQYTPVELQGVITREEFDLMKRRFNAQAEVLKQKCEKKESVSDDGEPSESPFT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAGGAAGGACTCGTCGTCGTATGAGAGTTTGACGGGCTATTGCAGAACATCGTTGACGCATGGCGGTAGTAGTGTGACATGTCAGTTTTATAGGGCCGAGACCAA
GTCAACTCGGATTAGGCTATACGGGGGTAGGGGAGAATTGATGAGGTTCTCGGGCATTGATCTGAGAACTCCTCGAAGTCGAGAGAGGTCTGGTCGGCTATGGCCAGCCT
GGGTTGCTGGGCCCCGACCCATTTACCTTGCGTCGCAGTTGTCGTTTTATGGACTGGCTGTCATAGCCCTCATTCTCTTTTGTCGTAGTTGGCTAACATCAAGTCTCTTA
GGCACTGCTATACGAATTTATCACATGAAGGAGGATTTGTCATTGTCGAAGTTCATCGATGATTTTGCGAAACCTGGTATGGTTGTGAATGTCTACTGGCTCGACCATCC
GAGCCGCCGCATTGACAATGAAGATCCAAAACTCCAGCGCGAGGGCAAAACTGCTCACCAAACACGAGGTGGAGCTACAAAGAAGATAGCACAAAGGTCTCACCGTCACG
TAGATCCTAATGTCCTTGCTGCCATGCAGCTCGAACTGAAAGACATGCATACCCAAGTACGAACCATAGAGGAGTTGTACAATAATCTATTGCATGCAACTAGAATAGGT
TCTCCTTATCATAATCTAGACGAAGATGAAGAACACCGCTTTCAGGATGAGACTTGCGACCCCAATCAGCACCCTGATGATGAAGACAACCCTATAAATGACGATTGTGA
TTATAGTCATCGTGAAGACGACCTGGGAAACTATCTCGTGGACAAAAAAGGGAAGGGCCCCACCCTAAAGGGTGCGGATGCCTCCCTGAGCTATTCGCAAAAGAATCAGA
ACGACAAAGCCCAGTCGCAATATACTCCTGTCGAGTTGCAAGGAGTAATCACGAGGGAAGAGTTCGACCTGATGAAGAGAAGGTTCAATGCTCAGGCCGAAGTCCTGAAA
CAAAAGTGTGAGAAGAAAGAAAGTGTCTCCGATGATGGCGAGCCTAGCGAATCACCATTCACCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAAGGAAGGACTCGTCGTCGTATGAGAGTTTGACGGGCTATTGCAGAACATCGTTGACGCATGGCGGTAGTAGTGTGACATGTCAGTTTTATAGGGCCGAGACCAA
GTCAACTCGGATTAGGCTATACGGGGGTAGGGGAGAATTGATGAGGTTCTCGGGCATTGATCTGAGAACTCCTCGAAGTCGAGAGAGGTCTGGTCGGCTATGGCCAGCCT
GGGTTGCTGGGCCCCGACCCATTTACCTTGCGTCGCAGTTGTCGTTTTATGGACTGGCTGTCATAGCCCTCATTCTCTTTTGTCGTAGTTGGCTAACATCAAGTCTCTTA
GGCACTGCTATACGAATTTATCACATGAAGGAGGATTTGTCATTGTCGAAGTTCATCGATGATTTTGCGAAACCTGGTATGGTTGTGAATGTCTACTGGCTCGACCATCC
GAGCCGCCGCATTGACAATGAAGATCCAAAACTCCAGCGCGAGGGCAAAACTGCTCACCAAACACGAGGTGGAGCTACAAAGAAGATAGCACAAAGGTCTCACCGTCACG
TAGATCCTAATGTCCTTGCTGCCATGCAGCTCGAACTGAAAGACATGCATACCCAAGTACGAACCATAGAGGAGTTGTACAATAATCTATTGCATGCAACTAGAATAGGT
TCTCCTTATCATAATCTAGACGAAGATGAAGAACACCGCTTTCAGGATGAGACTTGCGACCCCAATCAGCACCCTGATGATGAAGACAACCCTATAAATGACGATTGTGA
TTATAGTCATCGTGAAGACGACCTGGGAAACTATCTCGTGGACAAAAAAGGGAAGGGCCCCACCCTAAAGGGTGCGGATGCCTCCCTGAGCTATTCGCAAAAGAATCAGA
ACGACAAAGCCCAGTCGCAATATACTCCTGTCGAGTTGCAAGGAGTAATCACGAGGGAAGAGTTCGACCTGATGAAGAGAAGGTTCAATGCTCAGGCCGAAGTCCTGAAA
CAAAAGTGTGAGAAGAAAGAAAGTGTCTCCGATGATGGCGAGCCTAGCGAATCACCATTCACCTAG
Protein sequenceShow/hide protein sequence
MSRKDSSSYESLTGYCRTSLTHGGSSVTCQFYRAETKSTRIRLYGGRGELMRFSGIDLRTPRSRERSGRLWPAWVAGPRPIYLASQLSFYGLAVIALILFCRSWLTSSLL
GTAIRIYHMKEDLSLSKFIDDFAKPGMVVNVYWLDHPSRRIDNEDPKLQREGKTAHQTRGGATKKIAQRSHRHVDPNVLAAMQLELKDMHTQVRTIEELYNNLLHATRIG
SPYHNLDEDEEHRFQDETCDPNQHPDDEDNPINDDCDYSHREDDLGNYLVDKKGKGPTLKGADASLSYSQKNQNDKAQSQYTPVELQGVITREEFDLMKRRFNAQAEVLK
QKCEKKESVSDDGEPSESPFT