; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc01g15960 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g15960
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationchr1:10294842..10296451
RNA-Seq ExpressionMoc01g15960
SyntenyMoc01g15960
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151642.1 uncharacterized protein LOC111019549 [Momordica charantia]6.3e-12992.03Show/hide
Query:  MKLTEKFRNEGMRRIFSKAAKAFKISKFRYYWGQFAGFPGLHKYLEDIGFDKWANAYQLGM--------------------SRGTFLIEYVENILKEVAE
        MKLTEKFRNEGMRRIFSKAAKAFKISKFRYYWGQFAGFPGLHKYLEDIGFDKWANAYQLGM                    SRGTFLIEYVENILKEVAE
Subjt:  MKLTEKFRNEGMRRIFSKAAKAFKISKFRYYWGQFAGFPGLHKYLEDIGFDKWANAYQLGM--------------------SRGTFLIEYVENILKEVAE

Query:  QARYHHVRPIHCFEFEVHDGATKVRVNINSKTYTCKQFDYYEIPCSHAITEVVLRNISVHTLCSDKYRIDTLIQAYAEPVYPLGDEEDWILPDDYVPTRL
        QARYHHVRPIHCFEFEVHDGATKVRVNINSKTYTCKQFDYYEIPCSHAITEVVLRNISVHTLCSDKYRIDTLIQAYAEPVYPLGDEEDWILPDDYVPTRL
Subjt:  QARYHHVRPIHCFEFEVHDGATKVRVNINSKTYTCKQFDYYEIPCSHAITEVVLRNISVHTLCSDKYRIDTLIQAYAEPVYPLGDEEDWILPDDYVPTRL

Query:  SHPDSFLALDVAKLPGYHQPVKSARFIFEFIDNRFILSKFSSSTSVEVDPE
        SHPDSFLALDVAKLPGYHQPVKSARFIFEFIDNRFILSKFSSSTSVEVDPE
Subjt:  SHPDSFLALDVAKLPGYHQPVKSARFIFEFIDNRFILSKFSSSTSVEVDPE

XP_022154803.1 uncharacterized protein LOC111021969 [Momordica charantia]4.1e-8068.4Show/hide
Query:  MKLTEKFRNEGMRRIFSKAAKAFKISKFRYYWGQFAGFPGLHKYLEDIGFDKWANAYQLGM---------------------------------------
        MKLTEKFRN GMRRIF KAAKAFK+SKFRYYWGQ AGFPG+HKYLEDIG DKWA  YQ GM                                       
Subjt:  MKLTEKFRNEGMRRIFSKAAKAFKISKFRYYWGQFAGFPGLHKYLEDIGFDKWANAYQLGM---------------------------------------

Query:  ---------SRGTFLIEYVENILKEVAEQARYHHVRPIHCFEFEVHDGATKVRVNINSKTYTCKQFDYYEIPCSHAITEVVLRNISVHTLCSDKYRIDTL
                 SRGTFL EY ENILKEVAEQARYHHVRPI  FEFEVHDGATKVRVNINSKT TCKQF YYEIPCSHAI   VLRNISVHTLCSD+YRIDTL
Subjt:  ---------SRGTFLIEYVENILKEVAEQARYHHVRPIHCFEFEVHDGATKVRVNINSKTYTCKQFDYYEIPCSHAITEVVLRNISVHTLCSDKYRIDTL

Query:  IQAYAEPVYPLGDEEDWILPDDYVPTRLSHP
        IQAY EPVYPLGDEEDWILP DYVPT +  P
Subjt:  IQAYAEPVYPLGDEEDWILPDDYVPTRLSHP

XP_022154924.1 uncharacterized protein LOC111022069 [Momordica charantia]6.8e-5145.78Show/hide
Query:  MKLTEKF--RNEGMRRIFSKAAKAFKISKFRYYWGQFAGFPGLHKYLEDIGFDKWANAYQLGM-------------------------------------
        M L +KF  R+EG+  ++  AAKAFK S FRYYW Q AGFP + KYLE++GFDKW+ AYQ G+                                     
Subjt:  MKLTEKF--RNEGMRRIFSKAAKAFKISKFRYYWGQFAGFPGLHKYLEDIGFDKWANAYQLGM-------------------------------------

Query:  -----------SRGTFLIEYVENILKEVAEQARYHHVRPIHCFEFEVHDGATKVRVNINSKTYTCKQFDYYEIPCSHAITEVVLRNISVHTLCSDKYRID
                   +R + L +Y E I+K   EQ R H +RPI  +E++VHDG++KVRVN+NSK+ TCKQFDYY+IPCSHA+   + RN+S++TLCS KY+++
Subjt:  -----------SRGTFLIEYVENILKEVAEQARYHHVRPIHCFEFEVHDGATKVRVNINSKTYTCKQFDYYEIPCSHAITEVVLRNISVHTLCSDKYRID

Query:  TLIQAYAEPVYPLGDEEDWILPDDY
         L+ AYAEP+Y LGDE+DW LPDD+
Subjt:  TLIQAYAEPVYPLGDEEDWILPDDY

XP_022155156.1 uncharacterized protein LOC111022299 [Momordica charantia]1.1e-5346.78Show/hide
Query:  MKLTEKF--RNEGMRRIFSKAAKAFKISKFRYYWGQFAGFPGLHKYLEDIGFDKWANAYQ----------------------------------------
        M L +KF  R+EG+  ++  AAKAFK S FRYYW Q AGFP L +YLE++GFDKW+ AYQ                                        
Subjt:  MKLTEKF--RNEGMRRIFSKAAKAFKISKFRYYWGQFAGFPGLHKYLEDIGFDKWANAYQ----------------------------------------

Query:  --------LGMSRGTFLIEYVENILKEVAEQARYHHVRPIHCFEFEVHDGATKVRVNINSKTYTCKQFDYYEIPCSHAITEVVLRNISVHTLCSDKYRID
                   +R + L +YVE I+K   EQAR H +RPI  +E+EVHDG +KVRVN+NSK+ TCKQFDYY+IPCSHA+   + RN+S++TLCS KY+++
Subjt:  --------LGMSRGTFLIEYVENILKEVAEQARYHHVRPIHCFEFEVHDGATKVRVNINSKTYTCKQFDYYEIPCSHAITEVVLRNISVHTLCSDKYRID

Query:  TLIQAYAEPVYPLGDEEDWILPDDYVPTRLSHP
        TL+  YAEP+YPLGDEEDW LPDD+V   +  P
Subjt:  TLIQAYAEPVYPLGDEEDWILPDDYVPTRLSHP

XP_022157237.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Momordica charantia]5.9e-7161.47Show/hide
Query:  MKLTEKFRNEGMRRIFSKAAKAFKISKFRYYWGQFAGFPGLHKYLEDIGFDKWANAYQLGM---------------------------------------
        MKL EKFRNEGM+ IF+KAAKAFKISKFRYYWGQ AGFPG+ KYLEDIGFDKWA AYQ GM                                       
Subjt:  MKLTEKFRNEGMRRIFSKAAKAFKISKFRYYWGQFAGFPGLHKYLEDIGFDKWANAYQLGM---------------------------------------

Query:  ---------SRGTFLIEYVENILKEVAEQARYHHVRPIHCFEFEVHDGATKVRVNINSKTYTCKQFDYYEIPCSHAITEVVLRNISVHTLCSDKYRIDTL
                 S GT L EY E ILK+ AE+ARYHHVRPI  FEFEVHDG +KV VN+NSKT TCKQFDY+EI CSHAI   V RNISVH+LCSD+Y+I+TL
Subjt:  ---------SRGTFLIEYVENILKEVAEQARYHHVRPIHCFEFEVHDGATKVRVNINSKTYTCKQFDYYEIPCSHAITEVVLRNISVHTLCSDKYRIDTL

Query:  IQAYAEPVYPLGDEEDWILPDDYVPTRLSHP
        I  YAEPVYPLGDEEDWILPDDYVP  +  P
Subjt:  IQAYAEPVYPLGDEEDWILPDDYVPTRLSHP

TrEMBL top hitse value%identityAlignment
A0A6J1DE23 uncharacterized protein LOC1110195493.0e-12992.03Show/hide
Query:  MKLTEKFRNEGMRRIFSKAAKAFKISKFRYYWGQFAGFPGLHKYLEDIGFDKWANAYQLGM--------------------SRGTFLIEYVENILKEVAE
        MKLTEKFRNEGMRRIFSKAAKAFKISKFRYYWGQFAGFPGLHKYLEDIGFDKWANAYQLGM                    SRGTFLIEYVENILKEVAE
Subjt:  MKLTEKFRNEGMRRIFSKAAKAFKISKFRYYWGQFAGFPGLHKYLEDIGFDKWANAYQLGM--------------------SRGTFLIEYVENILKEVAE

Query:  QARYHHVRPIHCFEFEVHDGATKVRVNINSKTYTCKQFDYYEIPCSHAITEVVLRNISVHTLCSDKYRIDTLIQAYAEPVYPLGDEEDWILPDDYVPTRL
        QARYHHVRPIHCFEFEVHDGATKVRVNINSKTYTCKQFDYYEIPCSHAITEVVLRNISVHTLCSDKYRIDTLIQAYAEPVYPLGDEEDWILPDDYVPTRL
Subjt:  QARYHHVRPIHCFEFEVHDGATKVRVNINSKTYTCKQFDYYEIPCSHAITEVVLRNISVHTLCSDKYRIDTLIQAYAEPVYPLGDEEDWILPDDYVPTRL

Query:  SHPDSFLALDVAKLPGYHQPVKSARFIFEFIDNRFILSKFSSSTSVEVDPE
        SHPDSFLALDVAKLPGYHQPVKSARFIFEFIDNRFILSKFSSSTSVEVDPE
Subjt:  SHPDSFLALDVAKLPGYHQPVKSARFIFEFIDNRFILSKFSSSTSVEVDPE

A0A6J1DLB0 uncharacterized protein LOC1110219692.0e-8068.4Show/hide
Query:  MKLTEKFRNEGMRRIFSKAAKAFKISKFRYYWGQFAGFPGLHKYLEDIGFDKWANAYQLGM---------------------------------------
        MKLTEKFRN GMRRIF KAAKAFK+SKFRYYWGQ AGFPG+HKYLEDIG DKWA  YQ GM                                       
Subjt:  MKLTEKFRNEGMRRIFSKAAKAFKISKFRYYWGQFAGFPGLHKYLEDIGFDKWANAYQLGM---------------------------------------

Query:  ---------SRGTFLIEYVENILKEVAEQARYHHVRPIHCFEFEVHDGATKVRVNINSKTYTCKQFDYYEIPCSHAITEVVLRNISVHTLCSDKYRIDTL
                 SRGTFL EY ENILKEVAEQARYHHVRPI  FEFEVHDGATKVRVNINSKT TCKQF YYEIPCSHAI   VLRNISVHTLCSD+YRIDTL
Subjt:  ---------SRGTFLIEYVENILKEVAEQARYHHVRPIHCFEFEVHDGATKVRVNINSKTYTCKQFDYYEIPCSHAITEVVLRNISVHTLCSDKYRIDTL

Query:  IQAYAEPVYPLGDEEDWILPDDYVPTRLSHP
        IQAY EPVYPLGDEEDWILP DYVPT +  P
Subjt:  IQAYAEPVYPLGDEEDWILPDDYVPTRLSHP

A0A6J1DNQ2 uncharacterized protein LOC1110220693.3e-5145.78Show/hide
Query:  MKLTEKF--RNEGMRRIFSKAAKAFKISKFRYYWGQFAGFPGLHKYLEDIGFDKWANAYQLGM-------------------------------------
        M L +KF  R+EG+  ++  AAKAFK S FRYYW Q AGFP + KYLE++GFDKW+ AYQ G+                                     
Subjt:  MKLTEKF--RNEGMRRIFSKAAKAFKISKFRYYWGQFAGFPGLHKYLEDIGFDKWANAYQLGM-------------------------------------

Query:  -----------SRGTFLIEYVENILKEVAEQARYHHVRPIHCFEFEVHDGATKVRVNINSKTYTCKQFDYYEIPCSHAITEVVLRNISVHTLCSDKYRID
                   +R + L +Y E I+K   EQ R H +RPI  +E++VHDG++KVRVN+NSK+ TCKQFDYY+IPCSHA+   + RN+S++TLCS KY+++
Subjt:  -----------SRGTFLIEYVENILKEVAEQARYHHVRPIHCFEFEVHDGATKVRVNINSKTYTCKQFDYYEIPCSHAITEVVLRNISVHTLCSDKYRID

Query:  TLIQAYAEPVYPLGDEEDWILPDDY
         L+ AYAEP+Y LGDE+DW LPDD+
Subjt:  TLIQAYAEPVYPLGDEEDWILPDDY

A0A6J1DQV1 uncharacterized protein LOC1110222995.5e-5446.78Show/hide
Query:  MKLTEKF--RNEGMRRIFSKAAKAFKISKFRYYWGQFAGFPGLHKYLEDIGFDKWANAYQ----------------------------------------
        M L +KF  R+EG+  ++  AAKAFK S FRYYW Q AGFP L +YLE++GFDKW+ AYQ                                        
Subjt:  MKLTEKF--RNEGMRRIFSKAAKAFKISKFRYYWGQFAGFPGLHKYLEDIGFDKWANAYQ----------------------------------------

Query:  --------LGMSRGTFLIEYVENILKEVAEQARYHHVRPIHCFEFEVHDGATKVRVNINSKTYTCKQFDYYEIPCSHAITEVVLRNISVHTLCSDKYRID
                   +R + L +YVE I+K   EQAR H +RPI  +E+EVHDG +KVRVN+NSK+ TCKQFDYY+IPCSHA+   + RN+S++TLCS KY+++
Subjt:  --------LGMSRGTFLIEYVENILKEVAEQARYHHVRPIHCFEFEVHDGATKVRVNINSKTYTCKQFDYYEIPCSHAITEVVLRNISVHTLCSDKYRID

Query:  TLIQAYAEPVYPLGDEEDWILPDDYVPTRLSHP
        TL+  YAEP+YPLGDEEDW LPDD+V   +  P
Subjt:  TLIQAYAEPVYPLGDEEDWILPDDYVPTRLSHP

A0A6J1DU12 protein FAR-RED ELONGATED HYPOCOTYL 3-like2.9e-7161.47Show/hide
Query:  MKLTEKFRNEGMRRIFSKAAKAFKISKFRYYWGQFAGFPGLHKYLEDIGFDKWANAYQLGM---------------------------------------
        MKL EKFRNEGM+ IF+KAAKAFKISKFRYYWGQ AGFPG+ KYLEDIGFDKWA AYQ GM                                       
Subjt:  MKLTEKFRNEGMRRIFSKAAKAFKISKFRYYWGQFAGFPGLHKYLEDIGFDKWANAYQLGM---------------------------------------

Query:  ---------SRGTFLIEYVENILKEVAEQARYHHVRPIHCFEFEVHDGATKVRVNINSKTYTCKQFDYYEIPCSHAITEVVLRNISVHTLCSDKYRIDTL
                 S GT L EY E ILK+ AE+ARYHHVRPI  FEFEVHDG +KV VN+NSKT TCKQFDY+EI CSHAI   V RNISVH+LCSD+Y+I+TL
Subjt:  ---------SRGTFLIEYVENILKEVAEQARYHHVRPIHCFEFEVHDGATKVRVNINSKTYTCKQFDYYEIPCSHAITEVVLRNISVHTLCSDKYRIDTL

Query:  IQAYAEPVYPLGDEEDWILPDDYVPTRLSHP
        I  YAEPVYPLGDEEDWILPDDYVP  +  P
Subjt:  IQAYAEPVYPLGDEEDWILPDDYVPTRLSHP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64260.1 MuDR family transposase4.2e-0625.76Show/hide
Query:  FDKWANAYQLGMSRGTFLIEYVENILKEVAEQARYHHVRPIHCFEFEVHDGATKVR--VNINSKTYTCKQFDYYEIPCSHAITEVVLRNISVHTLCSDKY
        FDK  ++    ++RG    E   + L+E    +  + +  +    F+V + + K    V +N  T TC++F  Y+ PC HA+       I+      + Y
Subjt:  FDKWANAYQLGMSRGTFLIEYVENILKEVAEQARYHHVRPIHCFEFEVHDGATKVR--VNINSKTYTCKQFDYYEIPCSHAITEVVLRNISVHTLCSDKY

Query:  RIDTLIQAYAEPVYPLGDEEDWILPDD-YVPT
         ++   + YA    P+ D   W  P+D  VPT
Subjt:  RIDTLIQAYAEPVYPLGDEEDWILPDD-YVPT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTGACCGAGAAGTTTAGAAATGAGGGGATGAGGAGGATTTTCTCTAAAGCAGCCAAGGCGTTCAAGATATCAAAGTTTCGGTACTATTGGGGCCAATTCGCCGG
ATTCCCCGGATTACACAAATATTTGGAAGACATCGGCTTCGACAAGTGGGCCAACGCATATCAACTTGGAATGAGTCGAGGAACATTTCTCATCGAATATGTAGAGAATA
TTCTTAAAGAAGTGGCAGAACAAGCTCGATATCATCATGTCAGGCCGATTCATTGTTTCGAATTCGAAGTGCATGATGGTGCGACCAAGGTACGTGTAAACATTAATAGC
AAGACCTACACGTGCAAACAATTTGACTATTACGAAATTCCATGCTCTCACGCCATTACCGAGGTAGTGCTTCGTAACATTAGTGTGCATACATTATGTTCTGATAAGTA
CCGAATAGATACCCTCATACAAGCTTATGCCGAACCCGTGTACCCGCTTGGAGATGAGGAAGATTGGATTTTACCAGATGACTATGTGCCTACACGATTAAGCCACCCAG
ATTCATTCCTCGCGTTAGACGTCGCCAAACTGCCAGGATACCATCAGCCGGTGAAGTCCGCCAGGTTCATTTTTGAATTCATTGATAATAGGTTTATACTGTCAAAATTC
TCGAGCTCGACCTCGGTCGAGGTAGATCCTGAGTCTCCACTACGAAACTACTGCGGTGTCGACGTAACCCTACGGATTCGCCATAGTATGATTGGTAAGGCTGGACGTAC
CGCAATCACCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTGACCGAGAAGTTTAGAAATGAGGGGATGAGGAGGATTTTCTCTAAAGCAGCCAAGGCGTTCAAGATATCAAAGTTTCGGTACTATTGGGGCCAATTCGCCGG
ATTCCCCGGATTACACAAATATTTGGAAGACATCGGCTTCGACAAGTGGGCCAACGCATATCAACTTGGAATGAGTCGAGGAACATTTCTCATCGAATATGTAGAGAATA
TTCTTAAAGAAGTGGCAGAACAAGCTCGATATCATCATGTCAGGCCGATTCATTGTTTCGAATTCGAAGTGCATGATGGTGCGACCAAGGTACGTGTAAACATTAATAGC
AAGACCTACACGTGCAAACAATTTGACTATTACGAAATTCCATGCTCTCACGCCATTACCGAGGTAGTGCTTCGTAACATTAGTGTGCATACATTATGTTCTGATAAGTA
CCGAATAGATACCCTCATACAAGCTTATGCCGAACCCGTGTACCCGCTTGGAGATGAGGAAGATTGGATTTTACCAGATGACTATGTGCCTACACGATTAAGCCACCCAG
ATTCATTCCTCGCGTTAGACGTCGCCAAACTGCCAGGATACCATCAGCCGGTGAAGTCCGCCAGGTTCATTTTTGAATTCATTGATAATAGGTTTATACTGTCAAAATTC
TCGAGCTCGACCTCGGTCGAGGTAGATCCTGAGTCTCCACTACGAAACTACTGCGGTGTCGACGTAACCCTACGGATTCGCCATAGTATGATTGGTAAGGCTGGACGTAC
CGCAATCACCTAG
Protein sequenceShow/hide protein sequence
MKLTEKFRNEGMRRIFSKAAKAFKISKFRYYWGQFAGFPGLHKYLEDIGFDKWANAYQLGMSRGTFLIEYVENILKEVAEQARYHHVRPIHCFEFEVHDGATKVRVNINS
KTYTCKQFDYYEIPCSHAITEVVLRNISVHTLCSDKYRIDTLIQAYAEPVYPLGDEEDWILPDDYVPTRLSHPDSFLALDVAKLPGYHQPVKSARFIFEFIDNRFILSKF
SSSTSVEVDPESPLRNYCGVDVTLRIRHSMIGKAGRTAIT