; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc01g16190 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g16190
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionE3 ubiquitin-protein ligase RNF181-like
Genome locationchr1:10422179..10430786
RNA-Seq ExpressionMoc01g16190
SyntenyMoc01g16190
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595648.1 hypothetical protein SDJN03_12201, partial [Cucurbita argyrosperma subsp. sororia]1.8e-1331.22Show/hide
Query:  SSSLLRYFLHGTVGPSSGDPPFQFLEVRLGMISTE---APFS--------APMAMANAVFPLSLRRFFHHRPPF--HYLLWILSSLDLPPAASHAVARNI
        +S  ++Y ++G    +SG+ P+Q L+++L     E   +P S        AP+ + N +FPL L+    H P F   Y+  +LS L++       +A  I
Subjt:  SSSLLRYFLHGTVGPSSGDPPFQFLEVRLGMISTE---APFS--------APMAMANAVFPLSLRRFFHHRPPF--HYLLWILSSLDLPPAASHAVARNI

Query:  AAFVTHLTRGNAEVDLRVVAVVDYIQIAVSVGQRQRQSRSWNAD-----ESMILDEVPAPEPAPEFVEEEGGGELGDCSICFEELKIDGHGGNGSGTKKN
         ++   +  GN E     V  +DYI++   + +     + W+ D     E+ IL+E     P  E V EE G E+GDCSIC EEL  +G+ GNG G K+ 
Subjt:  AAFVTHLTRGNAEVDLRVVAVVDYIQIAVSVGQRQRQSRSWNAD-----ESMILDEVPAPEPAPEFVEEEGGGELGDCSICFEELKIDGHGGNGSGTKKN

Query:  KVVKI
        +V+++
Subjt:  KVVKI

KAG6595650.1 hypothetical protein SDJN03_12203, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1230.73Show/hide
Query:  SSSLLRYFLHGTVGPSSGDPPFQFLEVRLGMISTE---APFS--------APMAMANAVFPLSLRRFFHHRPPF--HYLLWILSSLDLPPAASHAVARNI
        +S  ++Y ++G    +SG+ P+Q L+++L     E   +P S        AP+ + N +FPL L+    H P F   Y+  +LS L++       +A  I
Subjt:  SSSLLRYFLHGTVGPSSGDPPFQFLEVRLGMISTE---APFS--------APMAMANAVFPLSLRRFFHHRPPF--HYLLWILSSLDLPPAASHAVARNI

Query:  AAFVTHLTRGNAEVDLRVVAVVDYIQIAVSVGQRQRQSRSWNAD-----ESMILDEVPAPEPAPEFVEEEGGGELGDCSICFEELKIDGHGGNGSGTKKN
         ++   +  GN E     V  +DYI++   + +     + W+ D     E+ IL+E     P  E V EE G E+GDCSIC EEL  +G+ G G G K+ 
Subjt:  AAFVTHLTRGNAEVDLRVVAVVDYIQIAVSVGQRQRQSRSWNAD-----ESMILDEVPAPEPAPEFVEEEGGGELGDCSICFEELKIDGHGGNGSGTKKN

Query:  KVVKI
        +V+++
Subjt:  KVVKI

XP_022151639.1 uncharacterized protein LOC111019546 [Momordica charantia]2.2e-104100Show/hide
Query:  MASFASSSSSSSSLLRYFLHGTVGPSSGDPPFQFLEVRLGMISTEAPFSAPMAMANAVFPLSLRRFFHHRPPFHYLLWILSSLDLPPAASHAVARNIAAF
        MASFASSSSSSSSLLRYFLHGTVGPSSGDPPFQFLEVRLGMISTEAPFSAPMAMANAVFPLSLRRFFHHRPPFHYLLWILSSLDLPPAASHAVARNIAAF
Subjt:  MASFASSSSSSSSLLRYFLHGTVGPSSGDPPFQFLEVRLGMISTEAPFSAPMAMANAVFPLSLRRFFHHRPPFHYLLWILSSLDLPPAASHAVARNIAAF

Query:  VTHLTRGNAEVDLRVVAVVDYIQIAVSVGQRQRQSRSWNADESMILDEVPAPEPAPEFVEEEGGGELGDCSICFEELKIDGHGGNGSGTKKNKVVKIG
        VTHLTRGNAEVDLRVVAVVDYIQIAVSVGQRQRQSRSWNADESMILDEVPAPEPAPEFVEEEGGGELGDCSICFEELKIDGHGGNGSGTKKNKVVKIG
Subjt:  VTHLTRGNAEVDLRVVAVVDYIQIAVSVGQRQRQSRSWNADESMILDEVPAPEPAPEFVEEEGGGELGDCSICFEELKIDGHGGNGSGTKKNKVVKIG

XP_022151640.1 E3 ubiquitin-protein ligase RNF181-like [Momordica charantia]1.6e-1140Show/hide
Query:  SSSSSSLLRYFLHGTVG-PSSGDPPFQFLEVRL----GMISTEAPF----SAPMAMANAVFPLSLRRFFHHRPPFHYLLWILSSLDLPPAASHAVARNIA
        SSS+S  +RY LHG     SSGD P Q L+VRL     MIS         ++   MANAVFPL L           Y+  +L SLDLP  A   +AR IA
Subjt:  SSSSSSLLRYFLHGTVG-PSSGDPPFQFLEVRL----GMISTEAPF----SAPMAMANAVFPLSLRRFFHHRPPFHYLLWILSSLDLPPAASHAVARNIA

Query:  AFVTHLTRGNA-EVDLRVVAVVDYIQIAVSVGQRQRQSRSWNADESMILDEVPAPEPAPEFVEEEGGGELGDCSICFEEL
        +FV  L  GN+ +V+L VVA+VDYI+    V +      + +A   +            E VEEE   ELGDCS+C  E+
Subjt:  AFVTHLTRGNA-EVDLRVVAVVDYIQIAVSVGQRQRQSRSWNADESMILDEVPAPEPAPEFVEEEGGGELGDCSICFEEL

XP_023518048.1 uncharacterized protein LOC111781594 [Cucurbita pepo subsp. pepo]2.5e-1230.24Show/hide
Query:  SSSLLRYFLHGTVGPSSGDPPFQFLEVRLGMISTE---APFS--------APMAMANAVFPLSLRRFFHHRPPF--HYLLWILSSLDLPPAASHAVARNI
        +S  ++Y ++G    +SG+ P+Q L+++L  I  +   +P S        AP+ + N +FPL L+    H P     Y+  +LS L++   A  A+A  I
Subjt:  SSSLLRYFLHGTVGPSSGDPPFQFLEVRLGMISTE---APFS--------APMAMANAVFPLSLRRFFHHRPPF--HYLLWILSSLDLPPAASHAVARNI

Query:  AAFVTHLTRGNAEVDLRVVAVVDYIQIAVSVGQRQRQSRSWN-----ADESMILDEVPAPEPAPEFVEEEGGGELGDCSICFEELKIDGHGGNGSGTKKN
         ++   +  GN E     V  +D+I++   + +     + W+      +E++IL+E     P  E V EE G E+GDCSIC EEL      GNG G K+ 
Subjt:  AAFVTHLTRGNAEVDLRVVAVVDYIQIAVSVGQRQRQSRSWN-----ADESMILDEVPAPEPAPEFVEEEGGGELGDCSICFEELKIDGHGGNGSGTKKN

Query:  KVVKI
        +V+++
Subjt:  KVVKI

TrEMBL top hitse value%identityAlignment
A0A0A0K2W2 RING-type domain-containing protein4.1e-0834.85Show/hide
Query:  NAVFPLSLRRFFHHRPPFHYLLWILSSLDLPPAASHAVARNIAAFVTHLTRGNAEVDLRVVAVVDYIQIAVSVGQRQRQSRSWNADESMILDEVP-----
        NA+F LSLR+    + P  Y+  ILSSL++ PAAS  +AR IA+ +  +   N+E +  ++A VD+I++   +           A+E+++LDE P     
Subjt:  NAVFPLSLRRFFHHRPPFHYLLWILSSLDLPPAASHAVARNIAAFVTHLTRGNAEVDLRVVAVVDYIQIAVSVGQRQRQSRSWNADESMILDEVP-----

Query:  --APEPAPEFVEEEGGGELGDCSICFEELKID
                    EE   ELGDCSIC +EL  +
Subjt:  --APEPAPEFVEEEGGGELGDCSICFEELKID

A0A0A0K696 RING-type domain-containing protein4.1e-0834.85Show/hide
Query:  NAVFPLSLRRFFHHRPPFHYLLWILSSLDLPPAASHAVARNIAAFVTHLTRGNAEVDLRVVAVVDYIQIAVSVGQRQRQSRSWNADESMILDEVP-----
        NA+F LSLR+    + P  Y+  ILSSL++ PAAS  +AR IA+ +  +   N+E +  ++A VD+I++   +           A+E+++LDE P     
Subjt:  NAVFPLSLRRFFHHRPPFHYLLWILSSLDLPPAASHAVARNIAAFVTHLTRGNAEVDLRVVAVVDYIQIAVSVGQRQRQSRSWNADESMILDEVP-----

Query:  --APEPAPEFVEEEGGGELGDCSICFEELKID
                    EE   ELGDCSIC +EL  +
Subjt:  --APEPAPEFVEEEGGGELGDCSICFEELKID

A0A5D3E1S5 E3 ubiquitin-protein ligase RNF181-like protein1.0e-0629.02Show/hide
Query:  SSSSSSLLRYFLHGTVGPSSGDPPFQFLEVRLG----MISTEAPFSAP---------MAMANAVFPLSLRRFFHHRPPFHYLLWILSSLDLPPAASHAVA
        S + S+ ++Y L+G+    +G      LEVR+     MIS       P         +   NA+  L+LR+    + P  Y+   LSSL++ PAAS ++A
Subjt:  SSSSSSLLRYFLHGTVGPSSGDPPFQFLEVRLG----MISTEAPFSAP---------MAMANAVFPLSLRRFFHHRPPFHYLLWILSSLDLPPAASHAVA

Query:  RNIAAFVTHLTRGNAEVDLRVVAVVDYIQIAVSVGQRQRQSRSWNADESMILDEVP-------APEPAPEFVEEEGGGELGDCSICFEELKID
        R IA+ +  +   N + +  ++A VD+I++     + + QS    A+E+++ DE P                 EE   +LGDCSIC +EL  +
Subjt:  RNIAAFVTHLTRGNAEVDLRVVAVVDYIQIAVSVGQRQRQSRSWNADESMILDEVP-------APEPAPEFVEEEGGGELGDCSICFEELKID

A0A6J1DBR5 E3 ubiquitin-protein ligase RNF181-like8.0e-1240Show/hide
Query:  SSSSSSLLRYFLHGTVG-PSSGDPPFQFLEVRL----GMISTEAPF----SAPMAMANAVFPLSLRRFFHHRPPFHYLLWILSSLDLPPAASHAVARNIA
        SSS+S  +RY LHG     SSGD P Q L+VRL     MIS         ++   MANAVFPL L           Y+  +L SLDLP  A   +AR IA
Subjt:  SSSSSSLLRYFLHGTVG-PSSGDPPFQFLEVRL----GMISTEAPF----SAPMAMANAVFPLSLRRFFHHRPPFHYLLWILSSLDLPPAASHAVARNIA

Query:  AFVTHLTRGNA-EVDLRVVAVVDYIQIAVSVGQRQRQSRSWNADESMILDEVPAPEPAPEFVEEEGGGELGDCSICFEEL
        +FV  L  GN+ +V+L VVA+VDYI+    V +      + +A   +            E VEEE   ELGDCS+C  E+
Subjt:  AFVTHLTRGNA-EVDLRVVAVVDYIQIAVSVGQRQRQSRSWNADESMILDEVPAPEPAPEFVEEEGGGELGDCSICFEEL

A0A6J1DDM9 uncharacterized protein LOC1110195461.0e-104100Show/hide
Query:  MASFASSSSSSSSLLRYFLHGTVGPSSGDPPFQFLEVRLGMISTEAPFSAPMAMANAVFPLSLRRFFHHRPPFHYLLWILSSLDLPPAASHAVARNIAAF
        MASFASSSSSSSSLLRYFLHGTVGPSSGDPPFQFLEVRLGMISTEAPFSAPMAMANAVFPLSLRRFFHHRPPFHYLLWILSSLDLPPAASHAVARNIAAF
Subjt:  MASFASSSSSSSSLLRYFLHGTVGPSSGDPPFQFLEVRLGMISTEAPFSAPMAMANAVFPLSLRRFFHHRPPFHYLLWILSSLDLPPAASHAVARNIAAF

Query:  VTHLTRGNAEVDLRVVAVVDYIQIAVSVGQRQRQSRSWNADESMILDEVPAPEPAPEFVEEEGGGELGDCSICFEELKIDGHGGNGSGTKKNKVVKIG
        VTHLTRGNAEVDLRVVAVVDYIQIAVSVGQRQRQSRSWNADESMILDEVPAPEPAPEFVEEEGGGELGDCSICFEELKIDGHGGNGSGTKKNKVVKIG
Subjt:  VTHLTRGNAEVDLRVVAVVDYIQIAVSVGQRQRQSRSWNADESMILDEVPAPEPAPEFVEEEGGGELGDCSICFEELKIDGHGGNGSGTKKNKVVKIG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTTCGCTTCTTCTTCTTCTTCTTCTTCTTCATTGCTCCGCTACTTTCTCCACGGCACCGTCGGCCCCTCCTCCGGCGACCCTCCGTTTCAATTTCTCGAAGT
CCGATTGGGGATGATCTCCACCGAAGCTCCCTTCAGTGCTCCAATGGCGATGGCCAACGCCGTGTTCCCTCTCTCTCTCCGCCGATTCTTCCATCACCGCCCTCCCTTCC
ACTACCTGCTCTGGATTCTGTCCTCCCTCGACCTCCCCCCCGCCGCCTCCCACGCCGTCGCTCGGAACATCGCCGCCTTCGTGACCCACTTGACCCGCGGGAACGCCGAG
GTCGACTTACGCGTCGTCGCCGTCGTCGATTACATTCAGATCGCGGTTTCGGTGGGGCAGAGGCAGAGGCAGAGTCGGAGTTGGAACGCCGACGAGAGTATGATTCTCGA
TGAAGTTCCGGCGCCGGAGCCGGCGCCGGAGTTTGTAGAAGAAGAAGGAGGAGGAGAATTGGGAGATTGCAGCATTTGTTTTGAGGAACTAAAAATTGACGGCCATGGCG
GAAACGGGAGCGGGACGAAGAAGAATAAGGTGGTTAAGATTGGTTCAGTCTGGACAAAGAGGGTGGGATTTTCCCAGAAAGTTGGTTGTGGGAAAGGTAAAGGGAAGGAG
CCTGATCTCCAGATTGTTGAAGGACAGGCTGAGATGGGTGAGATTGGTGAGATTGCTGAGGAAGTCCGGGACCAAACCAGAAATGTTGGTCCAGTTAATCCAAAAAAACT
TGAGGTGGTGAAGCTTTGCCATGCCTGGTTGGATGGGACCAGTCAGATTGGAGAGCTTGTGGAGCATGAGTGTTTCCAGGAACAGAAGGTCGCCGATCTCCGGTGGGATT
TGGCCCGAGAGTTCGCTGGAGACGATCGTAAGAGAGATAACACGGTGGGAAGCCCGATCGCACTCGATGCAGTACCACTCGCAGCAGTCAGTTTCCAGATCTTCATCGAA
GCTCGGAGATTCCAATTAACTTTGTCTACTGGAGAAGCCATGGAAACCGACCATGTCTCCGCCAGAAACAGAGCAACATTTTATGTGAAAAATGAGGGGAGATTCAATAT
GGGGTTTGCTCAAAATGGCACAAGAACGGTGACAGGAGCGGGTGAAATGGGTGGCGAGCATGGATCTGGATTAGGTGCCGCGGACGACGAGCGACATGTAGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTTTCGCTTCTTCTTCTTCTTCTTCTTCTTCATTGCTCCGCTACTTTCTCCACGGCACCGTCGGCCCCTCCTCCGGCGACCCTCCGTTTCAATTTCTCGAAGT
CCGATTGGGGATGATCTCCACCGAAGCTCCCTTCAGTGCTCCAATGGCGATGGCCAACGCCGTGTTCCCTCTCTCTCTCCGCCGATTCTTCCATCACCGCCCTCCCTTCC
ACTACCTGCTCTGGATTCTGTCCTCCCTCGACCTCCCCCCCGCCGCCTCCCACGCCGTCGCTCGGAACATCGCCGCCTTCGTGACCCACTTGACCCGCGGGAACGCCGAG
GTCGACTTACGCGTCGTCGCCGTCGTCGATTACATTCAGATCGCGGTTTCGGTGGGGCAGAGGCAGAGGCAGAGTCGGAGTTGGAACGCCGACGAGAGTATGATTCTCGA
TGAAGTTCCGGCGCCGGAGCCGGCGCCGGAGTTTGTAGAAGAAGAAGGAGGAGGAGAATTGGGAGATTGCAGCATTTGTTTTGAGGAACTAAAAATTGACGGCCATGGCG
GAAACGGGAGCGGGACGAAGAAGAATAAGGTGGTTAAGATTGGTTCAGTCTGGACAAAGAGGGTGGGATTTTCCCAGAAAGTTGGTTGTGGGAAAGGTAAAGGGAAGGAG
CCTGATCTCCAGATTGTTGAAGGACAGGCTGAGATGGGTGAGATTGGTGAGATTGCTGAGGAAGTCCGGGACCAAACCAGAAATGTTGGTCCAGTTAATCCAAAAAAACT
TGAGGTGGTGAAGCTTTGCCATGCCTGGTTGGATGGGACCAGTCAGATTGGAGAGCTTGTGGAGCATGAGTGTTTCCAGGAACAGAAGGTCGCCGATCTCCGGTGGGATT
TGGCCCGAGAGTTCGCTGGAGACGATCGTAAGAGAGATAACACGGTGGGAAGCCCGATCGCACTCGATGCAGTACCACTCGCAGCAGTCAGTTTCCAGATCTTCATCGAA
GCTCGGAGATTCCAATTAACTTTGTCTACTGGAGAAGCCATGGAAACCGACCATGTCTCCGCCAGAAACAGAGCAACATTTTATGTGAAAAATGAGGGGAGATTCAATAT
GGGGTTTGCTCAAAATGGCACAAGAACGGTGACAGGAGCGGGTGAAATGGGTGGCGAGCATGGATCTGGATTAGGTGCCGCGGACGACGAGCGACATGTAGACTAA
Protein sequenceShow/hide protein sequence
MASFASSSSSSSSLLRYFLHGTVGPSSGDPPFQFLEVRLGMISTEAPFSAPMAMANAVFPLSLRRFFHHRPPFHYLLWILSSLDLPPAASHAVARNIAAFVTHLTRGNAE
VDLRVVAVVDYIQIAVSVGQRQRQSRSWNADESMILDEVPAPEPAPEFVEEEGGGELGDCSICFEELKIDGHGGNGSGTKKNKVVKIGSVWTKRVGFSQKVGCGKGKGKE
PDLQIVEGQAEMGEIGEIAEEVRDQTRNVGPVNPKKLEVVKLCHAWLDGTSQIGELVEHECFQEQKVADLRWDLAREFAGDDRKRDNTVGSPIALDAVPLAAVSFQIFIE
ARRFQLTLSTGEAMETDHVSARNRATFYVKNEGRFNMGFAQNGTRTVTGAGEMGGEHGSGLGAADDERHVD