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Moc01g16340 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g16340
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr1:10528350..10529660
RNA-Seq ExpressionMoc01g16340
SyntenyMoc01g16340
Gene Ontology termsGO:0006470 - protein dephosphorylation (biological process)
GO:0006508 - proteolysis (biological process)
GO:0009737 - response to abscisic acid (biological process)
GO:0010119 - regulation of stomatal movement (biological process)
GO:0010468 - regulation of gene expression (biological process)
GO:0015074 - DNA integration (biological process)
GO:0043622 - cortical microtubule organization (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004185 - serine-type carboxypeptidase activity (molecular function)
GO:0004721 - phosphoprotein phosphatase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN83340.1 hypothetical protein VITISV_021483 [Vitis vinifera]4.8e-0942.11Show/hide
Query:  RDVLALIEGTDTA-----------------KQKGTSSMDDYIRKFKSLCDKLAAMKKPLDDLSRVFHIAKGLGSNY
        ++V+ L++GT+TA                 K+KGT S+D+Y+R+FK +CD LAA++KP+ DL +VF +A+GLG+ Y
Subjt:  RDVLALIEGTDTA-----------------KQKGTSSMDDYIRKFKSLCDKLAAMKKPLDDLSRVFHIAKGLGSNY

KGN45805.1 hypothetical protein Csa_005190 [Cucumis sativus]1.8e-1158.33Show/hide
Query:  VRDVLALIEGTDTAKQKGTSSMDDYIRKFKSLCDKLAAMKKPLDDLSRVFHIAKGLGSNY
        + DV  +IEGT+T  QKG S++D++++K K LCDKLAAMKKP DD+ +VF +A+GLGS Y
Subjt:  VRDVLALIEGTDTAKQKGTSSMDDYIRKFKSLCDKLAAMKKPLDDLSRVFHIAKGLGSNY

PNX56937.1 hypothetical protein L195_g050142, partial [Trifolium pratense]2.0e-0763.64Show/hide
Query:  KGTSSMDDYIRKFKSLCDKLAAMKKPLDDLSRVFHIAKGLGSNY
        KGT S+++YIRKFK +CDKLAA+ KPL D+ +VF I+KGLG+ Y
Subjt:  KGTSSMDDYIRKFKSLCDKLAAMKKPLDDLSRVFHIAKGLGSNY

PNX82907.1 hypothetical protein L195_g038944, partial [Trifolium pratense]2.6e-0761.36Show/hide
Query:  KGTSSMDDYIRKFKSLCDKLAAMKKPLDDLSRVFHIAKGLGSNY
        KG+ S+D+YIRKFK +CDKLAA+ KPL D+ +VF ++KGLG+ Y
Subjt:  KGTSSMDDYIRKFKSLCDKLAAMKKPLDDLSRVFHIAKGLGSNY

XP_022154021.1 uncharacterized protein LOC111021379 [Momordica charantia]7.9e-1248.84Show/hide
Query:  DVLALIEGTDTAKQ----------------------------KGTSSMDDYIRKFKSLCDKLAAMKKPLDDLSRVFHIAKGLGSNY
        DVL L+EGT+TAK+                            KG+ SMD+YIRKFK+LCD+L AMKKPLDDL++VFH+A+GLG  Y
Subjt:  DVLALIEGTDTAKQ----------------------------KGTSSMDDYIRKFKSLCDKLAAMKKPLDDLSRVFHIAKGLGSNY

TrEMBL top hitse value%identityAlignment
A0A0A0K7S3 Uncharacterized protein8.5e-1258.33Show/hide
Query:  VRDVLALIEGTDTAKQKGTSSMDDYIRKFKSLCDKLAAMKKPLDDLSRVFHIAKGLGSNY
        + DV  +IEGT+T  QKG S++D++++K K LCDKLAAMKKP DD+ +VF +A+GLGS Y
Subjt:  VRDVLALIEGTDTAKQKGTSSMDDYIRKFKSLCDKLAAMKKPLDDLSRVFHIAKGLGSNY

A0A2C9VFN4 Uncharacterized protein7.5e-0857.78Show/hide
Query:  QKGTSSMDDYIRKFKSLCDKLAAMKKPLDDLSRVFHIAKGLGSNY
        +KG+ S+D ++++FKS+CD LAA+KKP+DDL +VF +A+GLGS Y
Subjt:  QKGTSSMDDYIRKFKSLCDKLAAMKKPLDDLSRVFHIAKGLGSNY

A0A2K3JSC9 Uncharacterized protein (Fragment)9.8e-0863.64Show/hide
Query:  KGTSSMDDYIRKFKSLCDKLAAMKKPLDDLSRVFHIAKGLGSNY
        KGT S+++YIRKFK +CDKLAA+ KPL D+ +VF I+KGLG+ Y
Subjt:  KGTSSMDDYIRKFKSLCDKLAAMKKPLDDLSRVFHIAKGLGSNY

A0A6J1DMG5 uncharacterized protein LOC1110213793.8e-1248.84Show/hide
Query:  DVLALIEGTDTAKQ----------------------------KGTSSMDDYIRKFKSLCDKLAAMKKPLDDLSRVFHIAKGLGSNY
        DVL L+EGT+TAK+                            KG+ SMD+YIRKFK+LCD+L AMKKPLDDL++VFH+A+GLG  Y
Subjt:  DVLALIEGTDTAKQ----------------------------KGTSSMDDYIRKFKSLCDKLAAMKKPLDDLSRVFHIAKGLGSNY

A5BKK9 Reverse transcriptase Ty1/copia-type domain-containing protein2.3e-0942.11Show/hide
Query:  RDVLALIEGTDTA-----------------KQKGTSSMDDYIRKFKSLCDKLAAMKKPLDDLSRVFHIAKGLGSNY
        ++V+ L++GT+TA                 K+KGT S+D+Y+R+FK +CD LAA++KP+ DL +VF +A+GLG+ Y
Subjt:  RDVLALIEGTDTA-----------------KQKGTSSMDDYIRKFKSLCDKLAAMKKPLDDLSRVFHIAKGLGSNY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGAGTTTGTTTGCACTCTTTACAAACTCAATAACAAGTTGCATCAGTATTTAGCTTTAGCCAATGCGGCACGGAATCCACACGTTTTCCTAGTGATCCATGTTGC
GGAGCAAGGTGGGGTGGATGGGAGCATTTGCATCTCCTGCCGAAGTCACGTACGAGATGTGTTGGCTTTGATTGAAGGTACTGATACTGCAAAACAGAAAGGAACATCAT
CTATGGATGATTATATTAGAAAGTTTAAGAGTTTATGTGACAAGCTTGCAGCAATGAAAAAGCCATTGGATGATCTATCTAGAGTCTTCCATATTGCAAAAGGGTTAGGG
AGCAATTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTGAGTTTGTTTGCACTCTTTACAAACTCAATAACAAGTTGCATCAGTATTTAGCTTTAGCCAATGCGGCACGGAATCCACACGTTTTCCTAGTGATCCATGTTGC
GGAGCAAGGTGGGGTGGATGGGAGCATTTGCATCTCCTGCCGAAGTCACGTACGAGATGTGTTGGCTTTGATTGAAGGTACTGATACTGCAAAACAGAAAGGAACATCAT
CTATGGATGATTATATTAGAAAGTTTAAGAGTTTATGTGACAAGCTTGCAGCAATGAAAAAGCCATTGGATGATCTATCTAGAGTCTTCCATATTGCAAAAGGGTTAGGG
AGCAATTACTAG
Protein sequenceShow/hide protein sequence
MCEFVCTLYKLNNKLHQYLALANAARNPHVFLVIHVAEQGGVDGSICISCRSHVRDVLALIEGTDTAKQKGTSSMDDYIRKFKSLCDKLAAMKKPLDDLSRVFHIAKGLG
SNY