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Moc01g16580 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g16580
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr1:10853430..10853849
RNA-Seq ExpressionMoc01g16580
SyntenyMoc01g16580
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAD3337495.1 hypothetical protein E3N88_33015 [Mikania micrantha]1.2e-0741.98Show/hide
Query:  FSATLIGLARQWFPDLPQLSISTYQDLSRKFVDQFHYLCINRRTETHLIPVKQRLDGYLKAYVARFTIECLQVGKSVQDMR
        FS TL+G AR WF  LP  SI T++DLSRKF+  F       R    L  +KQ+ D  L+A++ R+ +E L +G + + MR
Subjt:  FSATLIGLARQWFPDLPQLSISTYQDLSRKFVDQFHYLCINRRTETHLIPVKQRLDGYLKAYVARFTIECLQVGKSVQDMR

KAD6119312.1 hypothetical protein E3N88_10583 [Mikania micrantha]2.0e-0740.74Show/hide
Query:  FSATLIGLARQWFPDLPQLSISTYQDLSRKFVDQFHYLCINRRTETHLIPVKQRLDGYLKAYVARFTIECLQVGKSVQDMR
        FS TL+G AR WF  LP  SI T++DLSRKF+  F       R    L  +KQ+ +  L+A++ R+ +E L +G + + MR
Subjt:  FSATLIGLARQWFPDLPQLSISTYQDLSRKFVDQFHYLCINRRTETHLIPVKQRLDGYLKAYVARFTIECLQVGKSVQDMR

XP_022150613.1 uncharacterized protein LOC111018708, partial [Momordica charantia]3.1e-0843.21Show/hide
Query:  RGFSATLIGLARQWFPDLPQLSISTYQDLSRKFVDQFHYLCINRRTETHLIPVKQRLDGYLKAYVARFTIECLQVGKSVQD
        R F   L G AR W+  LP  SISTY  L R+F+ QF      ++TETHL  ++Q+  G L+ YV RF  E L+V     D
Subjt:  RGFSATLIGLARQWFPDLPQLSISTYQDLSRKFVDQFHYLCINRRTETHLIPVKQRLDGYLKAYVARFTIECLQVGKSVQD

XP_022154446.1 uncharacterized protein LOC111021718 [Momordica charantia]1.8e-0844.44Show/hide
Query:  RGFSATLIGLARQWFPDLPQLSISTYQDLSRKFVDQFHYLCINRRTETHLIPVKQRLDGYLKAYVARFTIECLQVGKSVQD
        R F   LIG AR W+  LP  SISTY  L ++F+ QF     NR+T THL  V+Q+    L+ YV RF  E L+V     D
Subjt:  RGFSATLIGLARQWFPDLPQLSISTYQDLSRKFVDQFHYLCINRRTETHLIPVKQRLDGYLKAYVARFTIECLQVGKSVQD

XP_022157448.1 uncharacterized protein LOC111024144 [Momordica charantia]2.6e-0740.74Show/hide
Query:  RGFSATLIGLARQWFPDLPQLSISTYQDLSRKFVDQFHYLCINRRTETHLIPVKQRLDGYLKAYVARFTIECLQVGKSVQD
        R F   L G AR W+  L   SISTY  L ++F+ QF Y   +R+T THL  ++Q+    L+ YV RF  E L+V     D
Subjt:  RGFSATLIGLARQWFPDLPQLSISTYQDLSRKFVDQFHYLCINRRTETHLIPVKQRLDGYLKAYVARFTIECLQVGKSVQD

TrEMBL top hitse value%identityAlignment
A0A5N6MA10 Retrotrans_gag domain-containing protein5.6e-0841.98Show/hide
Query:  FSATLIGLARQWFPDLPQLSISTYQDLSRKFVDQFHYLCINRRTETHLIPVKQRLDGYLKAYVARFTIECLQVGKSVQDMR
        FS TL+G AR WF  LP  SI T++DLSRKF+  F       R    L  +KQ+ D  L+A++ R+ +E L +G + + MR
Subjt:  FSATLIGLARQWFPDLPQLSISTYQDLSRKFVDQFHYLCINRRTETHLIPVKQRLDGYLKAYVARFTIECLQVGKSVQDMR

A0A5N6PCS0 Retrotrans_gag domain-containing protein9.6e-0840.74Show/hide
Query:  FSATLIGLARQWFPDLPQLSISTYQDLSRKFVDQFHYLCINRRTETHLIPVKQRLDGYLKAYVARFTIECLQVGKSVQDMR
        FS TL+G AR WF  LP  SI T++DLSRKF+  F       R    L  +KQ+ +  L+A++ R+ +E L +G + + MR
Subjt:  FSATLIGLARQWFPDLPQLSISTYQDLSRKFVDQFHYLCINRRTETHLIPVKQRLDGYLKAYVARFTIECLQVGKSVQDMR

A0A5N6PYB4 Retrotrans_gag domain-containing protein1.3e-0740.74Show/hide
Query:  FSATLIGLARQWFPDLPQLSISTYQDLSRKFVDQFHYLCINRRTETHLIPVKQRLDGYLKAYVARFTIECLQVGKSVQDMR
        FS TL+G AR WF  LP  SI T++DLSRKF+  F       R    L  +KQ+ +  L+A++ R+ +E L +G + + MR
Subjt:  FSATLIGLARQWFPDLPQLSISTYQDLSRKFVDQFHYLCINRRTETHLIPVKQRLDGYLKAYVARFTIECLQVGKSVQDMR

A0A6J1D9W7 uncharacterized protein LOC1110187081.5e-0843.21Show/hide
Query:  RGFSATLIGLARQWFPDLPQLSISTYQDLSRKFVDQFHYLCINRRTETHLIPVKQRLDGYLKAYVARFTIECLQVGKSVQD
        R F   L G AR W+  LP  SISTY  L R+F+ QF      ++TETHL  ++Q+  G L+ YV RF  E L+V     D
Subjt:  RGFSATLIGLARQWFPDLPQLSISTYQDLSRKFVDQFHYLCINRRTETHLIPVKQRLDGYLKAYVARFTIECLQVGKSVQD

A0A6J1DNR4 uncharacterized protein LOC1110217188.7e-0944.44Show/hide
Query:  RGFSATLIGLARQWFPDLPQLSISTYQDLSRKFVDQFHYLCINRRTETHLIPVKQRLDGYLKAYVARFTIECLQVGKSVQD
        R F   LIG AR W+  LP  SISTY  L ++F+ QF     NR+T THL  V+Q+    L+ YV RF  E L+V     D
Subjt:  RGFSATLIGLARQWFPDLPQLSISTYQDLSRKFVDQFHYLCINRRTETHLIPVKQRLDGYLKAYVARFTIECLQVGKSVQD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTGGGTTCTCTGCAACACTCATCGGCCTCGCCAGGCAGTGGTTCCCAGACTTGCCCCAACTCTCCATCTCAACATACCAAGATCTTTCCCGAAAGTTTGTCGATCA
GTTTCATTACTTATGCATCAACAGACGAACAGAGACCCACCTTATACCCGTTAAACAAAGGTTGGACGGATATCTTAAGGCCTATGTGGCACGTTTTACCATTGAATGCC
TGCAAGTCGGTAAGTCTGTGCAGGACATGCGTCCGAATTCTAAAGCGACAGTGGGGCATGGGACCACAAATGGTTACCACTGTACCAATGTGCACAACTTCATGGCCCTG
ATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGTGGGTTCTCTGCAACACTCATCGGCCTCGCCAGGCAGTGGTTCCCAGACTTGCCCCAACTCTCCATCTCAACATACCAAGATCTTTCCCGAAAGTTTGTCGATCA
GTTTCATTACTTATGCATCAACAGACGAACAGAGACCCACCTTATACCCGTTAAACAAAGGTTGGACGGATATCTTAAGGCCTATGTGGCACGTTTTACCATTGAATGCC
TGCAAGTCGGTAAGTCTGTGCAGGACATGCGTCCGAATTCTAAAGCGACAGTGGGGCATGGGACCACAAATGGTTACCACTGTACCAATGTGCACAACTTCATGGCCCTG
ATCTAG
Protein sequenceShow/hide protein sequence
MRGFSATLIGLARQWFPDLPQLSISTYQDLSRKFVDQFHYLCINRRTETHLIPVKQRLDGYLKAYVARFTIECLQVGKSVQDMRPNSKATVGHGTTNGYHCTNVHNFMAL
I